Protein–RNA interactions for Protein: Q8IYX3

CCDC116, Coiled-coil domain-containing protein 116, humanhuman

Predictions only

Length 515 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC116Q8IYX3 TTTY23-201ENST00000452889 512 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
CCDC116Q8IYX3 LINC02198-202ENST00000505371 526 ntTSL 5 BASIC4.6□□□□□ -1.67
CCDC116Q8IYX3 RNU6ATAC24P-201ENST00000516811 135 ntBASIC4.6□□□□□ -1.67
CCDC116Q8IYX3 HMGN2P6-201ENST00000551091 273 ntBASIC4.6□□□□□ -1.67
CCDC116Q8IYX3 AC134312.3-201ENST00000566155 213 ntTSL 2 BASIC4.6□□□□□ -1.67
CCDC116Q8IYX3 CYCSP40-201ENST00000575927 294 ntBASIC4.6□□□□□ -1.67
CCDC116Q8IYX3 SNRPGP20-201ENST00000604477 205 ntBASIC4.6□□□□□ -1.67
CCDC116Q8IYX3 AL773545.4-201ENST00000637262 310 ntBASIC4.6□□□□□ -1.67
CCDC116Q8IYX3 AL513478.4-201ENST00000641636 310 ntBASIC4.6□□□□□ -1.67
CCDC116Q8IYX3 ARAP2-210ENST00000618163 2592 ntTSL 5 BASIC4.6□□□□□ -1.67
CCDC116Q8IYX3 PTPRD-201ENST00000355233 8251 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
CCDC116Q8IYX3 MEI4-201ENST00000602452 4800 ntAPPRIS P1 TSL 5 BASIC4.6□□□□□ -1.67
CCDC116Q8IYX3 OR9H1P-201ENST00000446393 4888 ntAPPRIS P1 BASIC4.6□□□□□ -1.67
CCDC116Q8IYX3 BCLAF1-202ENST00000392348 2610 ntTSL 5 BASIC4.59□□□□□ -1.67
CCDC116Q8IYX3 DICER1-212ENST00000541352 5621 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
CCDC116Q8IYX3 CNTN5-212ENST00000619298 5734 ntTSL 5 BASIC4.59□□□□□ -1.67
CCDC116Q8IYX3 TECRL-202ENST00000507440 2876 ntTSL 5 BASIC4.59□□□□□ -1.67
CCDC116Q8IYX3 ATF7IP-209ENST00000536444 8774 ntAPPRIS ALT2 TSL 1 (best) BASIC4.59□□□□□ -1.67
CCDC116Q8IYX3 LARP4-202ENST00000347328 3621 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
CCDC116Q8IYX3 OR1A1-202ENST00000641322 3743 ntAPPRIS P1 BASIC4.59□□□□□ -1.67
CCDC116Q8IYX3 CACNB4-273ENST00000638091 4061 ntTSL 5 BASIC4.59□□□□□ -1.67
CCDC116Q8IYX3 CENPE-208ENST00000611174 8260 ntTSL 5 BASIC4.59□□□□□ -1.67
CCDC116Q8IYX3 RNU1-108P-201ENST00000362556 161 ntBASIC4.59□□□□□ -1.67
CCDC116Q8IYX3 RNU6-915P-201ENST00000364943 103 ntBASIC4.59□□□□□ -1.67
CCDC116Q8IYX3 RNU6-1280P-201ENST00000365211 107 ntBASIC4.59□□□□□ -1.67
CCDC116Q8IYX3 Y_RNA.521-201ENST00000384560 114 ntBASIC4.59□□□□□ -1.67
CCDC116Q8IYX3 AL590399.1-203ENST00000412631 256 ntTSL 5 BASIC4.59□□□□□ -1.67
CCDC116Q8IYX3 RPL23AP27-201ENST00000415161 451 ntBASIC4.59□□□□□ -1.67
CCDC116Q8IYX3 AL158823.1-201ENST00000418441 478 ntBASIC4.59□□□□□ -1.67
CCDC116Q8IYX3 AP001043.2-201ENST00000434589 288 ntTSL 3 BASIC4.59□□□□□ -1.67
CCDC116Q8IYX3 LANCL1-204ENST00000441020 4503 ntAPPRIS P1 TSL 5 BASIC4.59□□□□□ -1.67
CCDC116Q8IYX3 RPL23AP56-201ENST00000460778 453 ntBASIC4.59□□□□□ -1.67
CCDC116Q8IYX3 RN7SL808P-201ENST00000496066 299 ntBASIC4.59□□□□□ -1.67
CCDC116Q8IYX3 CCNH-206ENST00000508855 2391 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
CCDC116Q8IYX3 RNU6-561P-201ENST00000516222 102 ntBASIC4.59□□□□□ -1.67
CCDC116Q8IYX3 AC010197.1-201ENST00000541860 578 ntTSL 4 BASIC4.59□□□□□ -1.67
CCDC116Q8IYX3 BNIP3P1-201ENST00000547295 580 ntBASIC4.59□□□□□ -1.67
CCDC116Q8IYX3 AC104002.2-201ENST00000553919 318 ntTSL 5 BASIC4.59□□□□□ -1.67
CCDC116Q8IYX3 AC044860.2-201ENST00000561005 179 ntBASIC4.59□□□□□ -1.67
CCDC116Q8IYX3 CYP4A27P-201ENST00000567218 190 ntBASIC4.59□□□□□ -1.67
CCDC116Q8IYX3 SNORA74C-1-201ENST00000580726 201 ntBASIC4.59□□□□□ -1.67
CCDC116Q8IYX3 AC015911.9-201ENST00000591634 185 ntTSL 5 BASIC4.59□□□□□ -1.67
CCDC116Q8IYX3 AC025946.2-201ENST00000603398 234 ntBASIC4.59□□□□□ -1.67
CCDC116Q8IYX3 AC015914.2-201ENST00000618167 288 ntBASIC4.59□□□□□ -1.67
CCDC116Q8IYX3 AL445567.2-201ENST00000618935 498 ntBASIC4.59□□□□□ -1.67
CCDC116Q8IYX3 AL022401.1-201ENST00000619498 108 ntBASIC4.59□□□□□ -1.67
CCDC116Q8IYX3 DCDC1-211ENST00000597505 5352 ntAPPRIS ALT2 TSL 5 BASIC4.59□□□□□ -1.68
CCDC116Q8IYX3 UBE2D3-233ENST00000618836 3472 ntAPPRIS ALT1 TSL 5 BASIC4.59□□□□□ -1.68
CCDC116Q8IYX3 OR8J3-203ENST00000641913 3047 ntAPPRIS P1 BASIC4.59□□□□□ -1.68
CCDC116Q8IYX3 NEGR1-201ENST00000306821 5577 ntTSL 1 (best) BASIC4.59□□□□□ -1.68
CCDC116Q8IYX3 SLC44A5-202ENST00000370859 3896 ntAPPRIS ALT2 TSL 2 BASIC4.58□□□□□ -1.68
CCDC116Q8IYX3 RNA5SP123-201ENST00000363244 119 ntBASIC4.58□□□□□ -1.68
CCDC116Q8IYX3 Y_RNA.251-201ENST00000364551 99 ntBASIC4.58□□□□□ -1.68
CCDC116Q8IYX3 U3.15-201ENST00000365398 212 ntBASIC4.58□□□□□ -1.68
CCDC116Q8IYX3 RNU6-1197P-201ENST00000391183 107 ntBASIC4.58□□□□□ -1.68
CCDC116Q8IYX3 U3.26-201ENST00000391236 204 ntBASIC4.58□□□□□ -1.68
CCDC116Q8IYX3 MIR208B-201ENST00000401172 77 ntBASIC4.58□□□□□ -1.68
CCDC116Q8IYX3 SPTLC1P2-201ENST00000407089 121 ntBASIC4.58□□□□□ -1.68
CCDC116Q8IYX3 YPEL5P1-201ENST00000419731 367 ntBASIC4.58□□□□□ -1.68
CCDC116Q8IYX3 AL049745.1-201ENST00000433953 286 ntBASIC4.58□□□□□ -1.68
CCDC116Q8IYX3 AL162386.2-201ENST00000442428 457 ntTSL 3 BASIC4.58□□□□□ -1.68
CCDC116Q8IYX3 Z73495.1-201ENST00000444982 147 ntTSL 3 BASIC4.58□□□□□ -1.68
CCDC116Q8IYX3 RPL31P41-201ENST00000477967 372 ntBASIC4.58□□□□□ -1.68
CCDC116Q8IYX3 AC103975.1-201ENST00000482506 483 ntBASIC4.58□□□□□ -1.68
CCDC116Q8IYX3 AC231760.1-201ENST00000498002 260 ntBASIC4.58□□□□□ -1.68
CCDC116Q8IYX3 LINC02146-201ENST00000504244 509 ntTSL 3 BASIC4.58□□□□□ -1.68
CCDC116Q8IYX3 RPL37-204ENST00000508493 553 ntAPPRIS ALT1 TSL 1 (best) BASIC4.58□□□□□ -1.68
CCDC116Q8IYX3 RNA5SP392-201ENST00000516905 112 ntBASIC4.58□□□□□ -1.68
CCDC116Q8IYX3 MFAP5-205ENST00000535336 566 ntTSL 4 BASIC4.58□□□□□ -1.68
CCDC116Q8IYX3 AF099810.1-201ENST00000554219 525 ntTSL 3 BASIC4.58□□□□□ -1.68
CCDC116Q8IYX3 AC099793.1-201ENST00000567538 285 ntTSL 3 BASIC4.58□□□□□ -1.68
CCDC116Q8IYX3 AC091905.4-201ENST00000623432 202 ntBASIC4.58□□□□□ -1.68
CCDC116Q8IYX3 FAM184A-204ENST00000368475 3392 ntTSL 2 BASIC4.58□□□□□ -1.68
CCDC116Q8IYX3 KTN1-214ENST00000554507 2057 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
CCDC116Q8IYX3 RPS6KA5-207ENST00000614987 26795 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
CCDC116Q8IYX3 RAP1B-201ENST00000250559 13438 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
CCDC116Q8IYX3 HACD4-202ENST00000495827 8267 ntAPPRIS P1 TSL 2 BASIC4.58□□□□□ -1.68
CCDC116Q8IYX3 CD80-201ENST00000264246 2725 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
CCDC116Q8IYX3 MAPK10-235ENST00000638225 8941 ntAPPRIS P2 TSL 1 (best) BASIC4.58□□□□□ -1.68
CCDC116Q8IYX3 PPP1R9A-201ENST00000289495 3983 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
CCDC116Q8IYX3 AC106871.1-201ENST00000568324 3102 ntBASIC4.57□□□□□ -1.68
CCDC116Q8IYX3 ZNF12-203ENST00000404360 4474 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
CCDC116Q8IYX3 MTRR-202ENST00000440940 3215 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
CCDC116Q8IYX3 RNU6-1205P-201ENST00000363625 106 ntBASIC4.57□□□□□ -1.68
CCDC116Q8IYX3 RNU6-884P-201ENST00000363889 107 ntBASIC4.57□□□□□ -1.68
CCDC116Q8IYX3 Y_RNA.393-201ENST00000383936 102 ntBASIC4.57□□□□□ -1.68
CCDC116Q8IYX3 RNU6-1228P-201ENST00000391014 107 ntBASIC4.57□□□□□ -1.68
CCDC116Q8IYX3 AL606845.1-201ENST00000404881 255 ntBASIC4.57□□□□□ -1.68
CCDC116Q8IYX3 RNA5SP89-201ENST00000410300 108 ntBASIC4.57□□□□□ -1.68
CCDC116Q8IYX3 BX510359.2-201ENST00000417920 305 ntBASIC4.57□□□□□ -1.68
CCDC116Q8IYX3 AC112498.1-201ENST00000444401 332 ntBASIC4.57□□□□□ -1.68
CCDC116Q8IYX3 RPS27P1-201ENST00000450552 247 ntBASIC4.57□□□□□ -1.68
CCDC116Q8IYX3 HSPE1P13-201ENST00000451143 297 ntBASIC4.57□□□□□ -1.68
CCDC116Q8IYX3 RPL7AP6-201ENST00000477943 801 ntBASIC4.57□□□□□ -1.68
CCDC116Q8IYX3 AL159163.1-201ENST00000507747 600 ntAPPRIS P1 TSL 5 BASIC4.57□□□□□ -1.68
CCDC116Q8IYX3 VWA8P1-201ENST00000510889 176 ntBASIC4.57□□□□□ -1.68
CCDC116Q8IYX3 RNU6-1282P-201ENST00000516735 96 ntBASIC4.57□□□□□ -1.68
CCDC116Q8IYX3 RNU6-709P-201ENST00000517257 104 ntBASIC4.57□□□□□ -1.68
CCDC116Q8IYX3 AC090897.2-201ENST00000581715 130 ntBASIC4.57□□□□□ -1.68
CCDC116Q8IYX3 AL451007.1-201ENST00000595491 289 ntBASIC4.57□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 10.8 ms