Protein–RNA interactions for Protein: Q6NUP7

PPP4R4, Serine/threonine-protein phosphatase 4 regulatory subunit 4, humanhuman

Predictions only

Length 873 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R4Q6NUP7 LINC02055-204ENST00000521034 432 ntTSL 5 BASIC3.33□□□□□ -1.88
PPP4R4Q6NUP7 MIR3199-1-201ENST00000582434 88 ntBASIC3.33□□□□□ -1.88
PPP4R4Q6NUP7 LARP7P1-201ENST00000605576 316 ntBASIC3.33□□□□□ -1.88
PPP4R4Q6NUP7 uc_338.5-201ENST00000611839 155 ntBASIC3.33□□□□□ -1.88
PPP4R4Q6NUP7 AP000553.6-201ENST00000641242 118 ntBASIC3.33□□□□□ -1.88
PPP4R4Q6NUP7 CACNB4-238ENST00000636901 7706 ntTSL 5 BASIC3.33□□□□□ -1.88
PPP4R4Q6NUP7 GMFB-208ENST00000554908 6721 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
PPP4R4Q6NUP7 MYSM1-208ENST00000622766 6020 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
PPP4R4Q6NUP7 Z75746.1-201ENST00000440243 2080 ntBASIC3.32□□□□□ -1.88
PPP4R4Q6NUP7 MIR148B-201ENST00000362252 99 ntBASIC3.32□□□□□ -1.88
PPP4R4Q6NUP7 RNU6-1013P-201ENST00000384180 107 ntBASIC3.32□□□□□ -1.88
PPP4R4Q6NUP7 RNA5SP390-201ENST00000410191 113 ntBASIC3.32□□□□□ -1.88
PPP4R4Q6NUP7 RNU2-25P-201ENST00000411041 191 ntBASIC3.32□□□□□ -1.88
PPP4R4Q6NUP7 RNA5SP492-201ENST00000411330 114 ntBASIC3.32□□□□□ -1.88
PPP4R4Q6NUP7 AC093911.1-201ENST00000419129 552 ntTSL 4 BASIC3.32□□□□□ -1.88
PPP4R4Q6NUP7 GPC5-AS1-201ENST00000419288 393 ntTSL 3 BASIC3.32□□□□□ -1.88
PPP4R4Q6NUP7 BX276092.3-201ENST00000424182 230 ntBASIC3.32□□□□□ -1.88
PPP4R4Q6NUP7 TTTY8-202ENST00000426035 518 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
PPP4R4Q6NUP7 TTTY8B-202ENST00000455570 518 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
PPP4R4Q6NUP7 snoU13.22-201ENST00000459428 104 ntBASIC3.32□□□□□ -1.88
PPP4R4Q6NUP7 AC080013.2-201ENST00000460866 323 ntBASIC3.32□□□□□ -1.88
PPP4R4Q6NUP7 AC112771.1-201ENST00000463581 102 ntBASIC3.32□□□□□ -1.88
PPP4R4Q6NUP7 AC130509.1-201ENST00000464158 433 ntBASIC3.32□□□□□ -1.88
PPP4R4Q6NUP7 RPS26P21-201ENST00000475397 348 ntBASIC3.32□□□□□ -1.88
PPP4R4Q6NUP7 AC025244.2-201ENST00000509215 422 ntTSL 3 BASIC3.32□□□□□ -1.88
PPP4R4Q6NUP7 AC096745.1-201ENST00000509945 370 ntBASIC3.32□□□□□ -1.88
PPP4R4Q6NUP7 AC090897.2-201ENST00000581715 130 ntBASIC3.32□□□□□ -1.88
PPP4R4Q6NUP7 AC016866.2-201ENST00000585251 502 ntTSL 2 BASIC3.32□□□□□ -1.88
PPP4R4Q6NUP7 SRGNP1-201ENST00000603392 451 ntBASIC3.32□□□□□ -1.88
PPP4R4Q6NUP7 AL160281.1-201ENST00000605307 311 ntBASIC3.32□□□□□ -1.88
PPP4R4Q6NUP7 uc_338.15-201ENST00000615470 191 ntBASIC3.32□□□□□ -1.88
PPP4R4Q6NUP7 TPTEP1-208ENST00000636884 213 ntBASIC3.32□□□□□ -1.88
PPP4R4Q6NUP7 AC119674.1-207ENST00000641355 633 ntBASIC3.32□□□□□ -1.88
PPP4R4Q6NUP7 USP45-208ENST00000500704 5826 ntAPPRIS P1 TSL 5 BASIC3.32□□□□□ -1.88
PPP4R4Q6NUP7 ZNF483-201ENST00000309235 3655 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
PPP4R4Q6NUP7 MGAT4C-210ENST00000620241 3194 ntAPPRIS P1 TSL 2 BASIC3.31□□□□□ -1.88
PPP4R4Q6NUP7 OLFM3-206ENST00000536598 2801 ntTSL 5 BASIC3.31□□□□□ -1.88
PPP4R4Q6NUP7 MBNL3-204ENST00000370853 2661 ntAPPRIS P4 TSL 1 (best) BASIC3.31□□□□□ -1.88
PPP4R4Q6NUP7 RRAS2-211ENST00000537760 2034 ntTSL 2 BASIC3.31□□□□□ -1.88
PPP4R4Q6NUP7 AC032011.1-201ENST00000611703 1549 ntBASIC3.31□□□□□ -1.88
PPP4R4Q6NUP7 AGL-206ENST00000370165 7106 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
PPP4R4Q6NUP7 MTND4P23-201ENST00000447723 1363 ntBASIC3.31□□□□□ -1.88
PPP4R4Q6NUP7 RNU6-1010P-201ENST00000362757 107 ntBASIC3.31□□□□□ -1.88
PPP4R4Q6NUP7 SNORD56.1-201ENST00000362913 68 ntBASIC3.31□□□□□ -1.88
PPP4R4Q6NUP7 SNORD56.3-201ENST00000363507 71 ntBASIC3.31□□□□□ -1.88
PPP4R4Q6NUP7 RNU5E-4P-201ENST00000364931 120 ntBASIC3.31□□□□□ -1.88
PPP4R4Q6NUP7 SNORA5A-201ENST00000384111 134 ntBASIC3.31□□□□□ -1.88
PPP4R4Q6NUP7 RPS29P4-201ENST00000414733 161 ntBASIC3.31□□□□□ -1.88
PPP4R4Q6NUP7 AL161935.1-201ENST00000420945 421 ntTSL 3 BASIC3.31□□□□□ -1.88
PPP4R4Q6NUP7 AC243964.1-201ENST00000441814 261 ntBASIC3.31□□□□□ -1.88
PPP4R4Q6NUP7 LAMTOR5P1-201ENST00000444290 270 ntBASIC3.31□□□□□ -1.88
PPP4R4Q6NUP7 RN7SL594P-201ENST00000470590 287 ntBASIC3.31□□□□□ -1.88
PPP4R4Q6NUP7 AC023141.11-201ENST00000508864 202 ntBASIC3.31□□□□□ -1.88
PPP4R4Q6NUP7 AC091887.1-201ENST00000514002 439 ntTSL 5 BASIC3.31□□□□□ -1.88
PPP4R4Q6NUP7 AC109329.1-201ENST00000518744 317 ntBASIC3.31□□□□□ -1.88
PPP4R4Q6NUP7 CKS1BP7-201ENST00000522230 235 ntBASIC3.31□□□□□ -1.88
PPP4R4Q6NUP7 HSPE1P20-201ENST00000538133 289 ntBASIC3.31□□□□□ -1.88
PPP4R4Q6NUP7 AC127894.1-201ENST00000548266 851 ntTSL 3 BASIC3.31□□□□□ -1.88
PPP4R4Q6NUP7 MIR5187-201ENST00000583479 76 ntBASIC3.31□□□□□ -1.88
PPP4R4Q6NUP7 EAF1-AS1-207ENST00000599742 772 ntTSL 5 BASIC3.31□□□□□ -1.88
PPP4R4Q6NUP7 VN1R107P-201ENST00000601784 209 ntBASIC3.31□□□□□ -1.88
PPP4R4Q6NUP7 FIGNL1-212ENST00000613602 3187 ntAPPRIS P1 TSL 5 BASIC3.31□□□□□ -1.88
PPP4R4Q6NUP7 RTKN2-202ENST00000373789 6641 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
PPP4R4Q6NUP7 AL161912.2-201ENST00000565707 3007 ntBASIC3.3□□□□□ -1.88
PPP4R4Q6NUP7 GNAI3-201ENST00000369851 27174 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
PPP4R4Q6NUP7 POSTN-203ENST00000379747 3373 ntAPPRIS P3 TSL 1 (best) BASIC3.3□□□□□ -1.88
PPP4R4Q6NUP7 MTND4P12-201ENST00000498999 1377 ntBASIC3.3□□□□□ -1.88
PPP4R4Q6NUP7 SNORD114-19-201ENST00000363072 75 ntBASIC3.3□□□□□ -1.88
PPP4R4Q6NUP7 TSACC-205ENST00000368255 751 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
PPP4R4Q6NUP7 Y_RNA.474-201ENST00000384341 102 ntBASIC3.3□□□□□ -1.88
PPP4R4Q6NUP7 RNU6-692P-201ENST00000384496 107 ntBASIC3.3□□□□□ -1.88
PPP4R4Q6NUP7 MIR23A-201ENST00000385245 73 ntBASIC3.3□□□□□ -1.88
PPP4R4Q6NUP7 RNU6-220P-201ENST00000390919 107 ntBASIC3.3□□□□□ -1.88
PPP4R4Q6NUP7 MIR548F5-201ENST00000408421 86 ntBASIC3.3□□□□□ -1.88
PPP4R4Q6NUP7 RNU6-325P-201ENST00000411132 105 ntBASIC3.3□□□□□ -1.88
PPP4R4Q6NUP7 AL030996.1-201ENST00000411430 235 ntBASIC3.3□□□□□ -1.88
PPP4R4Q6NUP7 SNAP23P1-201ENST00000433229 246 ntBASIC3.3□□□□□ -1.88
PPP4R4Q6NUP7 AL645568.3-201ENST00000433683 316 ntBASIC3.3□□□□□ -1.88
PPP4R4Q6NUP7 LINC01683-201ENST00000443479 412 ntTSL 3 BASIC3.3□□□□□ -1.88
PPP4R4Q6NUP7 AL354824.2-201ENST00000458004 446 ntTSL 3 BASIC3.3□□□□□ -1.88
PPP4R4Q6NUP7 CENPBD1P1-201ENST00000464061 469 ntBASIC3.3□□□□□ -1.88
PPP4R4Q6NUP7 MTND4P17-201ENST00000470444 350 ntBASIC3.3□□□□□ -1.88
PPP4R4Q6NUP7 AC096576.1-201ENST00000489014 359 ntBASIC3.3□□□□□ -1.88
PPP4R4Q6NUP7 RPL23AP49-201ENST00000492925 468 ntBASIC3.3□□□□□ -1.88
PPP4R4Q6NUP7 AK3P2-201ENST00000507976 429 ntBASIC3.3□□□□□ -1.88
PPP4R4Q6NUP7 RNU1-95P-201ENST00000516357 160 ntBASIC3.3□□□□□ -1.88
PPP4R4Q6NUP7 RNU1-128P-201ENST00000516704 160 ntBASIC3.3□□□□□ -1.88
PPP4R4Q6NUP7 AC105029.1-201ENST00000520250 669 ntBASIC3.3□□□□□ -1.88
PPP4R4Q6NUP7 AC124290.1-202ENST00000523342 387 ntTSL 3 BASIC3.3□□□□□ -1.88
PPP4R4Q6NUP7 CPDP1-201ENST00000579660 283 ntBASIC3.3□□□□□ -1.88
PPP4R4Q6NUP7 BNIP3P16-201ENST00000589779 534 ntBASIC3.3□□□□□ -1.88
PPP4R4Q6NUP7 TTN-AS1-243ENST00000591867 748 ntTSL 5 BASIC3.3□□□□□ -1.88
PPP4R4Q6NUP7 AC069200.1-201ENST00000609511 323 ntBASIC3.3□□□□□ -1.88
PPP4R4Q6NUP7 AC039056.2-201ENST00000622261 511 ntBASIC3.3□□□□□ -1.88
PPP4R4Q6NUP7 AL008636.1-201ENST00000625038 1018 ntBASIC3.3□□□□□ -1.88
PPP4R4Q6NUP7 LINC02246-205ENST00000627623 417 ntTSL 5 BASIC3.3□□□□□ -1.88
PPP4R4Q6NUP7 AC241585.2-209ENST00000638217 143 ntBASIC3.3□□□□□ -1.88
PPP4R4Q6NUP7 ERBIN-204ENST00000380943 6410 ntAPPRIS P3 TSL 1 (best) BASIC3.3□□□□□ -1.88
PPP4R4Q6NUP7 SEL1L2-201ENST00000284951 2224 ntAPPRIS P1 TSL 5 BASIC3.29□□□□□ -1.88
PPP4R4Q6NUP7 EMCN-202ENST00000305864 1575 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 224.7 ms