Protein–RNA interactions for Protein: Q16384

SSX1, Protein SSX1, humanhuman

Predictions only

Length 188 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX1Q16384 AC004936.1-201ENST00000451755 361 ntTSL 3 BASIC1.36□□□□□ -2.19
SSX1Q16384 snoU13.14-201ENST00000459372 104 ntBASIC1.36□□□□□ -2.19
SSX1Q16384 AC068587.2-201ENST00000478386 781 ntBASIC1.36□□□□□ -2.19
SSX1Q16384 AP000797.1-201ENST00000478870 387 ntBASIC1.36□□□□□ -2.19
SSX1Q16384 AC093206.1-201ENST00000515364 497 ntTSL 3 BASIC1.36□□□□□ -2.19
SSX1Q16384 AC027335.1-201ENST00000515377 543 ntTSL 4 BASIC1.36□□□□□ -2.19
SSX1Q16384 RNU6-970P-201ENST00000516312 107 ntBASIC1.36□□□□□ -2.19
SSX1Q16384 HMSD-204ENST00000526932 162 ntTSL 3 BASIC1.36□□□□□ -2.19
SSX1Q16384 LINC02546-202ENST00000528119 801 ntTSL 5 BASIC1.36□□□□□ -2.19
SSX1Q16384 DUXAP5-201ENST00000529668 529 ntBASIC1.36□□□□□ -2.19
SSX1Q16384 AC012404.2-201ENST00000558572 481 ntTSL 3 BASIC1.36□□□□□ -2.19
SSX1Q16384 AC022254.1-201ENST00000567857 235 ntBASIC1.36□□□□□ -2.19
SSX1Q16384 MIR4513-201ENST00000581077 86 ntBASIC1.36□□□□□ -2.19
SSX1Q16384 MIR548AC-201ENST00000585049 88 ntBASIC1.36□□□□□ -2.19
SSX1Q16384 AC245748.3-201ENST00000588710 241 ntTSL 3 BASIC1.36□□□□□ -2.19
SSX1Q16384 BNIP3P25-201ENST00000596023 559 ntBASIC1.36□□□□□ -2.19
SSX1Q16384 AC104819.3-201ENST00000603264 540 ntTSL 4 BASIC1.36□□□□□ -2.19
SSX1Q16384 AC004908.3-201ENST00000610248 625 ntBASIC1.36□□□□□ -2.19
SSX1Q16384 AC012409.4-201ENST00000612923 249 ntBASIC1.36□□□□□ -2.19
SSX1Q16384 ST7-OT4_4.1-201ENST00000614993 213 ntBASIC1.36□□□□□ -2.19
SSX1Q16384 U6.42-201ENST00000618440 107 ntBASIC1.36□□□□□ -2.19
SSX1Q16384 MYCBP2-AS1-209ENST00000631152 412 ntTSL 5 BASIC1.36□□□□□ -2.19
SSX1Q16384 CYP3A43-217ENST00000631161 328 ntTSL 5 BASIC1.36□□□□□ -2.19
SSX1Q16384 CD44-239ENST00000639002 528 ntTSL 1 (best) BASIC1.36□□□□□ -2.19
SSX1Q16384 TDRD15-202ENST00000622654 5805 ntAPPRIS P1 BASIC1.35□□□□□ -2.19
SSX1Q16384 MDM2-206ENST00000350057 1401 ntTSL 1 (best) BASIC1.35□□□□□ -2.19
SSX1Q16384 PPIL4-202ENST00000340881 1089 ntTSL 1 (best) BASIC1.35□□□□□ -2.19
SSX1Q16384 RNU6-925P-201ENST00000384629 104 ntBASIC1.35□□□□□ -2.19
SSX1Q16384 MIR578-201ENST00000384828 96 ntBASIC1.35□□□□□ -2.19
SSX1Q16384 RNA5SP465-201ENST00000391195 109 ntBASIC1.35□□□□□ -2.19
SSX1Q16384 AL354941.1-201ENST00000438600 464 ntBASIC1.35□□□□□ -2.19
SSX1Q16384 AL356475.1-201ENST00000440321 341 ntTSL 5 BASIC1.35□□□□□ -2.19
SSX1Q16384 AC104058.1-201ENST00000448028 297 ntBASIC1.35□□□□□ -2.19
SSX1Q16384 AL133481.3-201ENST00000456546 333 ntTSL 3 BASIC1.35□□□□□ -2.19
SSX1Q16384 MTND2P39-201ENST00000457230 764 ntBASIC1.35□□□□□ -2.19
SSX1Q16384 AC023790.1-201ENST00000482174 347 ntBASIC1.35□□□□□ -2.19
SSX1Q16384 AC104564.1-201ENST00000493028 407 ntBASIC1.35□□□□□ -2.19
SSX1Q16384 SUB1-206ENST00000506237 908 ntAPPRIS P1 TSL 2 BASIC1.35□□□□□ -2.19
SSX1Q16384 AC034244.1-201ENST00000507687 207 ntBASIC1.35□□□□□ -2.19
SSX1Q16384 PTP4A1P4-201ENST00000512479 322 ntBASIC1.35□□□□□ -2.19
SSX1Q16384 OCIAD1-AS1-201ENST00000513576 265 ntTSL 3 BASIC1.35□□□□□ -2.19
SSX1Q16384 AC119751.5-201ENST00000514077 770 ntBASIC1.35□□□□□ -2.19
SSX1Q16384 AC117532.1-201ENST00000514638 323 ntBASIC1.35□□□□□ -2.19
SSX1Q16384 Y_RNA.687-201ENST00000516558 91 ntBASIC1.35□□□□□ -2.19
SSX1Q16384 RNU6-250P-201ENST00000516958 103 ntBASIC1.35□□□□□ -2.19
SSX1Q16384 RN7SKP256-201ENST00000517201 314 ntBASIC1.35□□□□□ -2.19
SSX1Q16384 FAM92A-209ENST00000519679 538 ntTSL 4 BASIC1.35□□□□□ -2.19
SSX1Q16384 AC022616.8-201ENST00000533569 253 ntBASIC1.35□□□□□ -2.19
SSX1Q16384 BNIP3P6-201ENST00000549284 499 ntBASIC1.35□□□□□ -2.19
SSX1Q16384 ADI1P3-201ENST00000549509 470 ntBASIC1.35□□□□□ -2.19
SSX1Q16384 AC023906.2-201ENST00000558343 462 ntTSL 3 BASIC1.35□□□□□ -2.19
SSX1Q16384 AC020891.3-201ENST00000560011 363 ntTSL 3 BASIC1.35□□□□□ -2.19
SSX1Q16384 LINC01206-214ENST00000610910 456 ntTSL 5 BASIC1.35□□□□□ -2.19
SSX1Q16384 MIR7974-201ENST00000615835 79 ntBASIC1.35□□□□□ -2.19
SSX1Q16384 AL078595.3-201ENST00000623815 1166 ntBASIC1.35□□□□□ -2.19
SSX1Q16384 SCARNA4-202ENST00000625402 129 ntBASIC1.35□□□□□ -2.19
SSX1Q16384 LRIF1-203ENST00000494675 1912 ntAPPRIS ALT2 TSL 2 BASIC1.34□□□□□ -2.19
SSX1Q16384 LRRC69-201ENST00000343709 720 ntTSL 2 BASIC1.34□□□□□ -2.19
SSX1Q16384 RNU6-1164P-201ENST00000364428 107 ntBASIC1.34□□□□□ -2.19
SSX1Q16384 RNU6-39P-201ENST00000384344 107 ntBASIC1.34□□□□□ -2.19
SSX1Q16384 SNORD14D-201ENST00000384390 87 ntBASIC1.34□□□□□ -2.19
SSX1Q16384 RNU6-1179P-201ENST00000384667 107 ntBASIC1.34□□□□□ -2.19
SSX1Q16384 RNU11-3P-201ENST00000391111 133 ntBASIC1.34□□□□□ -2.19
SSX1Q16384 CISD1P1-201ENST00000393907 327 ntBASIC1.34□□□□□ -2.19
SSX1Q16384 MIR1304-201ENST00000408243 91 ntBASIC1.34□□□□□ -2.19
SSX1Q16384 EIF4EP2-201ENST00000422816 654 ntBASIC1.34□□□□□ -2.19
SSX1Q16384 VN1R108P-201ENST00000431580 830 ntBASIC1.34□□□□□ -2.19
SSX1Q16384 AL592309.2-201ENST00000444647 607 ntTSL 5 BASIC1.34□□□□□ -2.19
SSX1Q16384 AC245102.2-201ENST00000448956 180 ntBASIC1.34□□□□□ -2.19
SSX1Q16384 AL353752.1-201ENST00000454946 260 ntBASIC1.34□□□□□ -2.19
SSX1Q16384 AMD1P1-201ENST00000457220 922 ntBASIC1.34□□□□□ -2.19
SSX1Q16384 MTCO2P29-201ENST00000465212 189 ntBASIC1.34□□□□□ -2.19
SSX1Q16384 MTCYBP35-201ENST00000503630 1137 ntBASIC1.34□□□□□ -2.19
SSX1Q16384 AC010587.1-201ENST00000505809 469 ntBASIC1.34□□□□□ -2.19
SSX1Q16384 AC079349.1-201ENST00000509096 589 ntTSL 2 BASIC1.34□□□□□ -2.19
SSX1Q16384 AC108078.2-201ENST00000510750 236 ntBASIC1.34□□□□□ -2.19
SSX1Q16384 RNU6-123P-201ENST00000516163 102 ntBASIC1.34□□□□□ -2.19
SSX1Q16384 RNU6-311P-201ENST00000516224 102 ntBASIC1.34□□□□□ -2.19
SSX1Q16384 SNORA43.2-201ENST00000516652 128 ntBASIC1.34□□□□□ -2.19
SSX1Q16384 AC090124.2-201ENST00000527727 563 ntTSL 4 BASIC1.34□□□□□ -2.19
SSX1Q16384 AP003181.2-201ENST00000528941 181 ntBASIC1.34□□□□□ -2.19
SSX1Q16384 AC018630.3-201ENST00000542637 96 ntBASIC1.34□□□□□ -2.19
SSX1Q16384 AL355076.2-202ENST00000553754 574 ntTSL 4 BASIC1.34□□□□□ -2.19
SSX1Q16384 AC091544.4-201ENST00000555268 342 ntBASIC1.34□□□□□ -2.19
SSX1Q16384 AC027458.1-201ENST00000563639 613 ntTSL 1 (best) BASIC1.34□□□□□ -2.19
SSX1Q16384 AC018554.1-202ENST00000565133 444 ntTSL 3 BASIC1.34□□□□□ -2.19
SSX1Q16384 MIR4713-201ENST00000582691 75 ntBASIC1.34□□□□□ -2.19
SSX1Q16384 SEPT7P9-203ENST00000604116 343 ntBASIC1.34□□□□□ -2.19
SSX1Q16384 AC105129.3-201ENST00000605455 485 ntBASIC1.34□□□□□ -2.19
SSX1Q16384 AL031775.1-201ENST00000607014 887 ntBASIC1.34□□□□□ -2.19
SSX1Q16384 AC103810.8-201ENST00000607347 118 ntBASIC1.34□□□□□ -2.19
SSX1Q16384 OR4G3P-201ENST00000633500 913 ntBASIC1.34□□□□□ -2.19
SSX1Q16384 OR4G2P-201ENST00000328113 903 ntBASIC1.33□□□□□ -2.2
SSX1Q16384 MIR126-201ENST00000362291 85 ntBASIC1.33□□□□□ -2.2
SSX1Q16384 RNU1-42P-201ENST00000364033 160 ntBASIC1.33□□□□□ -2.2
SSX1Q16384 TXNDC8-203ENST00000374511 472 ntAPPRIS ALT2 TSL 5 BASIC1.33□□□□□ -2.2
SSX1Q16384 MIR597-201ENST00000384968 97 ntBASIC1.33□□□□□ -2.2
SSX1Q16384 AC068050.1-201ENST00000394891 380 ntBASIC1.33□□□□□ -2.2
SSX1Q16384 RNU4-26P-201ENST00000410270 107 ntBASIC1.33□□□□□ -2.2
SSX1Q16384 Y_RNA.608-201ENST00000410647 95 ntBASIC1.33□□□□□ -2.2
Retrieved 100 of 98,524 protein–RNA pairs in 127.2 ms