Protein–RNA interactions for Protein: Q12829

RAB40B, Ras-related protein Rab-40B, humanhuman

Predictions only

Length 278 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40BQ12829 MIR4672-201ENST00000583126 81 ntBASIC1.96□□□□□ -2.1
RAB40BQ12829 AC068790.2-201ENST00000602601 557 ntBASIC1.96□□□□□ -2.1
RAB40BQ12829 uc_338.15-201ENST00000615470 191 ntBASIC1.96□□□□□ -2.1
RAB40BQ12829 AC023490.3-201ENST00000621762 358 ntTSL 3 BASIC1.96□□□□□ -2.1
RAB40BQ12829 MIR6132-201ENST00000622083 109 ntBASIC1.96□□□□□ -2.1
RAB40BQ12829 MIR3974-201ENST00000637126 96 ntBASIC1.96□□□□□ -2.1
RAB40BQ12829 AL160287.1-202ENST00000638113 454 ntTSL 5 BASIC1.96□□□□□ -2.1
RAB40BQ12829 AP000550.4-201ENST00000639507 358 ntTSL 3 BASIC1.96□□□□□ -2.1
RAB40BQ12829 TLK1-206ENST00000434911 2156 ntTSL 2 BASIC1.95□□□□□ -2.1
RAB40BQ12829 RNU4-48P-201ENST00000365559 182 ntBASIC1.95□□□□□ -2.1
RAB40BQ12829 RNU6-622P-201ENST00000384272 103 ntBASIC1.95□□□□□ -2.1
RAB40BQ12829 MIR186-201ENST00000384988 86 ntBASIC1.95□□□□□ -2.1
RAB40BQ12829 TRAJ49-201ENST00000390488 56 ntAPPRIS P1 BASIC1.95□□□□□ -2.1
RAB40BQ12829 MORF4L1P6-201ENST00000418771 268 ntBASIC1.95□□□□□ -2.1
RAB40BQ12829 AC090960.1-201ENST00000421072 306 ntBASIC1.95□□□□□ -2.1
RAB40BQ12829 AL358934.1-201ENST00000432346 324 ntBASIC1.95□□□□□ -2.1
RAB40BQ12829 AL596276.1-201ENST00000434465 418 ntBASIC1.95□□□□□ -2.1
RAB40BQ12829 AC020594.1-201ENST00000437680 338 ntTSL 3 BASIC1.95□□□□□ -2.1
RAB40BQ12829 AL031667.1-201ENST00000440222 725 ntBASIC1.95□□□□□ -2.1
RAB40BQ12829 AC009238.1-201ENST00000442165 424 ntBASIC1.95□□□□□ -2.1
RAB40BQ12829 USP9YP29-201ENST00000445112 563 ntBASIC1.95□□□□□ -2.1
RAB40BQ12829 AC009237.6-201ENST00000446969 424 ntBASIC1.95□□□□□ -2.1
RAB40BQ12829 AL021397.1-201ENST00000451806 248 ntBASIC1.95□□□□□ -2.1
RAB40BQ12829 C1DP4-201ENST00000455429 424 ntBASIC1.95□□□□□ -2.1
RAB40BQ12829 AL353780.1-201ENST00000455583 458 ntTSL 2 BASIC1.95□□□□□ -2.1
RAB40BQ12829 RPS3P1-201ENST00000456781 192 ntBASIC1.95□□□□□ -2.1
RAB40BQ12829 AC092666.1-201ENST00000492054 573 ntTSL 4 BASIC1.95□□□□□ -2.1
RAB40BQ12829 AC074344.1-201ENST00000512823 224 ntBASIC1.95□□□□□ -2.1
RAB40BQ12829 AC104136.1-201ENST00000512969 394 ntBASIC1.95□□□□□ -2.1
RAB40BQ12829 RNU2-53P-201ENST00000516257 147 ntBASIC1.95□□□□□ -2.1
RAB40BQ12829 RNU6-430P-201ENST00000517078 107 ntBASIC1.95□□□□□ -2.1
RAB40BQ12829 FAM92A-209ENST00000519679 538 ntTSL 4 BASIC1.95□□□□□ -2.1
RAB40BQ12829 AP002963.1-201ENST00000530590 184 ntBASIC1.95□□□□□ -2.1
RAB40BQ12829 AC090049.1-201ENST00000551075 1011 ntTSL 3 BASIC1.95□□□□□ -2.1
RAB40BQ12829 AC007631.1-201ENST00000578545 189 ntTSL 3 BASIC1.95□□□□□ -2.1
RAB40BQ12829 LRRC37A5P-203ENST00000580181 585 ntBASIC1.95□□□□□ -2.1
RAB40BQ12829 MIR4513-201ENST00000581077 86 ntBASIC1.95□□□□□ -2.1
RAB40BQ12829 AC022960.1-201ENST00000582269 348 ntTSL 3 BASIC1.95□□□□□ -2.1
RAB40BQ12829 NDUFA8P1-201ENST00000605525 367 ntBASIC1.95□□□□□ -2.1
RAB40BQ12829 AC008945.2-201ENST00000606056 604 ntBASIC1.95□□□□□ -2.1
RAB40BQ12829 AC098614.4-201ENST00000607601 462 ntBASIC1.95□□□□□ -2.1
RAB40BQ12829 AC008121.3-201ENST00000618726 433 ntBASIC1.95□□□□□ -2.1
RAB40BQ12829 AC099842.1-201ENST00000619919 596 ntBASIC1.95□□□□□ -2.1
RAB40BQ12829 AC009161.2-201ENST00000624626 138 ntBASIC1.95□□□□□ -2.1
RAB40BQ12829 RNA5SP138-201ENST00000365098 114 ntBASIC1.94□□□□□ -2.1
RAB40BQ12829 RNU6-715P-201ENST00000365204 103 ntBASIC1.94□□□□□ -2.1
RAB40BQ12829 RNU6-1032P-201ENST00000384100 107 ntBASIC1.94□□□□□ -2.1
RAB40BQ12829 RNU2-3P-201ENST00000410144 191 ntBASIC1.94□□□□□ -2.1
RAB40BQ12829 RNU4-46P-201ENST00000410818 138 ntBASIC1.94□□□□□ -2.1
RAB40BQ12829 RNU6-607P-201ENST00000411283 108 ntBASIC1.94□□□□□ -2.1
RAB40BQ12829 AC074117.2-201ENST00000417130 397 ntBASIC1.94□□□□□ -2.1
RAB40BQ12829 AC091153.2-202ENST00000441700 384 ntTSL 3 BASIC1.94□□□□□ -2.1
RAB40BQ12829 RPL23AP7-203ENST00000449021 469 ntBASIC1.94□□□□□ -2.1
RAB40BQ12829 RNU6-956P-201ENST00000458868 103 ntBASIC1.94□□□□□ -2.1
RAB40BQ12829 AC006512.1-201ENST00000468816 291 ntBASIC1.94□□□□□ -2.1
RAB40BQ12829 AP001025.1-201ENST00000486139 332 ntBASIC1.94□□□□□ -2.1
RAB40BQ12829 AC079804.2-201ENST00000490376 200 ntBASIC1.94□□□□□ -2.1
RAB40BQ12829 ARL2BPP4-201ENST00000506854 471 ntBASIC1.94□□□□□ -2.1
RAB40BQ12829 AC117460.1-201ENST00000508964 467 ntTSL 3 BASIC1.94□□□□□ -2.1
RAB40BQ12829 AC010486.3-201ENST00000511602 785 ntBASIC1.94□□□□□ -2.1
RAB40BQ12829 AC097460.1-201ENST00000514624 590 ntTSL 3 BASIC1.94□□□□□ -2.1
RAB40BQ12829 RNA5SP148-201ENST00000516527 94 ntBASIC1.94□□□□□ -2.1
RAB40BQ12829 AC109329.1-201ENST00000518744 317 ntBASIC1.94□□□□□ -2.1
RAB40BQ12829 AC022695.3-201ENST00000523385 478 ntTSL 3 BASIC1.94□□□□□ -2.1
RAB40BQ12829 SUB1P2-201ENST00000556401 297 ntBASIC1.94□□□□□ -2.1
RAB40BQ12829 UBE2Q2P8-201ENST00000560644 102 ntBASIC1.94□□□□□ -2.1
RAB40BQ12829 AC093249.1-201ENST00000567049 203 ntBASIC1.94□□□□□ -2.1
RAB40BQ12829 SNORD53-201ENST00000579969 78 ntBASIC1.94□□□□□ -2.1
RAB40BQ12829 AC090897.2-201ENST00000581715 130 ntBASIC1.94□□□□□ -2.1
RAB40BQ12829 AC087752.4-201ENST00000605911 462 ntBASIC1.94□□□□□ -2.1
RAB40BQ12829 Z69908.1-201ENST00000622603 247 ntBASIC1.94□□□□□ -2.1
RAB40BQ12829 AP003400.5-201ENST00000624827 617 ntBASIC1.94□□□□□ -2.1
RAB40BQ12829 AKAP7-209ENST00000541650 2008 ntTSL 5 BASIC1.94□□□□□ -2.1
RAB40BQ12829 KTN1-203ENST00000395309 4021 ntAPPRIS ALT2 TSL 5 BASIC1.94□□□□□ -2.1
RAB40BQ12829 CLLU1-201ENST00000378485 3897 ntAPPRIS P1 TSL 1 (best) BASIC1.94□□□□□ -2.1
RAB40BQ12829 ELL2P3-201ENST00000457883 1602 ntBASIC1.94□□□□□ -2.1
RAB40BQ12829 AC111000.4-202ENST00000505646 2648 ntTSL 2 BASIC1.94□□□□□ -2.1
RAB40BQ12829 AC130466.1-201ENST00000636354 4683 ntTSL 5 BASIC1.94□□□□□ -2.1
RAB40BQ12829 CEP57L1-203ENST00000368970 1680 ntAPPRIS ALT2 TSL 5 BASIC1.93□□□□□ -2.1
RAB40BQ12829 SLC39A10-201ENST00000359634 5322 ntAPPRIS P1 TSL 1 (best) BASIC1.93□□□□□ -2.1
RAB40BQ12829 OR5AK2-201ENST00000326855 996 ntAPPRIS P1 BASIC1.93□□□□□ -2.1
RAB40BQ12829 RNU6-78P-201ENST00000362897 107 ntBASIC1.93□□□□□ -2.1
RAB40BQ12829 SNORD56.1-201ENST00000362913 68 ntBASIC1.93□□□□□ -2.1
RAB40BQ12829 RNU5E-7P-201ENST00000365290 117 ntBASIC1.93□□□□□ -2.1
RAB40BQ12829 RNU6-348P-201ENST00000384386 107 ntBASIC1.93□□□□□ -2.1
RAB40BQ12829 MIR95-201ENST00000385072 81 ntBASIC1.93□□□□□ -2.1
RAB40BQ12829 MIR221-201ENST00000385135 110 ntBASIC1.93□□□□□ -2.1
RAB40BQ12829 RNA5SP270-201ENST00000411361 118 ntBASIC1.93□□□□□ -2.1
RAB40BQ12829 OR9R1P-201ENST00000412200 877 ntBASIC1.93□□□□□ -2.1
RAB40BQ12829 AC004014.1-201ENST00000413406 538 ntTSL 4 BASIC1.93□□□□□ -2.1
RAB40BQ12829 AIMP1P2-201ENST00000425294 312 ntBASIC1.93□□□□□ -2.1
RAB40BQ12829 AL353612.1-201ENST00000428769 465 ntTSL 3 BASIC1.93□□□□□ -2.1
RAB40BQ12829 LINC00459-201ENST00000431656 376 ntTSL 2 BASIC1.93□□□□□ -2.1
RAB40BQ12829 MTND4P32-201ENST00000437189 1237 ntBASIC1.93□□□□□ -2.1
RAB40BQ12829 AC016691.1-201ENST00000441321 413 ntBASIC1.93□□□□□ -2.1
RAB40BQ12829 IPO7P1-201ENST00000442031 636 ntBASIC1.93□□□□□ -2.1
RAB40BQ12829 AC069542.1-201ENST00000445235 557 ntTSL 3 BASIC1.93□□□□□ -2.1
RAB40BQ12829 MTND1P18-201ENST00000448191 573 ntBASIC1.93□□□□□ -2.1
RAB40BQ12829 AC005703.2-201ENST00000453339 343 ntTSL 2 BASIC1.93□□□□□ -2.1
RAB40BQ12829 MTCO3P9-201ENST00000506989 781 ntBASIC1.93□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 104.2 ms