Protein–RNA interactions for Protein: P62987

UBA52, Ubiquitin-60S ribosomal protein L40, humanhuman

Known RBP Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBA52P62987 AC010261.1-201ENST00000514411 457 ntTSL 5 BASIC0.32□□□□□ -2.36
UBA52P62987 AC109329.1-201ENST00000518744 317 ntBASIC0.32□□□□□ -2.36
UBA52P62987 LINC02384-208ENST00000546086 565 ntTSL 3 BASIC0.32□□□□□ -2.36
UBA52P62987 OR6C7P-201ENST00000547875 934 ntBASIC0.32□□□□□ -2.36
UBA52P62987 AC012170.3-201ENST00000560159 297 ntTSL 2 BASIC0.32□□□□□ -2.36
UBA52P62987 LARP7P2-201ENST00000575306 125 ntBASIC0.32□□□□□ -2.36
UBA52P62987 AC217774.1-201ENST00000578936 517 ntTSL 4 BASIC0.32□□□□□ -2.36
UBA52P62987 MIR4514-201ENST00000581410 57 ntBASIC0.32□□□□□ -2.36
UBA52P62987 HMGN1P30-201ENST00000589286 268 ntBASIC0.32□□□□□ -2.36
UBA52P62987 AC011509.1-201ENST00000589512 164 ntTSL 3 BASIC0.32□□□□□ -2.36
UBA52P62987 AC004160.1-210ENST00000599875 689 ntTSL 5 BASIC0.32□□□□□ -2.36
UBA52P62987 HOXA11-AS1_6.1-201ENST00000620092 179 ntBASIC0.32□□□□□ -2.36
UBA52P62987 MIR4275-201ENST00000636486 87 ntBASIC0.32□□□□□ -2.36
UBA52P62987 MINPP1-204ENST00000536010 2215 ntTSL 1 (best) BASIC0.32□□□□□ -2.36
UBA52P62987 SNORD114-24-201ENST00000365029 72 ntBASIC0.31□□□□□ -2.36
UBA52P62987 RNU6-673P-201ENST00000365084 104 ntBASIC0.31□□□□□ -2.36
UBA52P62987 AL121904.1-202ENST00000416638 656 ntTSL 5 BASIC0.31□□□□□ -2.36
UBA52P62987 AC005062.1-206ENST00000424516 710 ntTSL 3 BASIC0.31□□□□□ -2.36
UBA52P62987 HMGN1P33-201ENST00000432945 451 ntBASIC0.31□□□□□ -2.36
UBA52P62987 AC092783.1-201ENST00000435832 231 ntTSL 3 BASIC0.31□□□□□ -2.36
UBA52P62987 AC093639.1-201ENST00000441026 473 ntTSL 2 BASIC0.31□□□□□ -2.36
UBA52P62987 MTND2P4-201ENST00000445034 1004 ntBASIC0.31□□□□□ -2.36
UBA52P62987 AC079776.3-201ENST00000450665 370 ntBASIC0.31□□□□□ -2.36
UBA52P62987 RPL23AP35-201ENST00000451906 501 ntBASIC0.31□□□□□ -2.36
UBA52P62987 EPGN-207ENST00000505212 285 ntTSL 1 (best) BASIC0.31□□□□□ -2.36
UBA52P62987 LRRC34P2-201ENST00000514850 553 ntBASIC0.31□□□□□ -2.36
UBA52P62987 EPGN-209ENST00000514968 312 ntTSL 1 (best) BASIC0.31□□□□□ -2.36
UBA52P62987 RNU6-416P-201ENST00000516265 103 ntBASIC0.31□□□□□ -2.36
UBA52P62987 RNU6-528P-201ENST00000516926 100 ntBASIC0.31□□□□□ -2.36
UBA52P62987 IGJP1-201ENST00000522682 475 ntBASIC0.31□□□□□ -2.36
UBA52P62987 KLRF1-203ENST00000537723 598 ntTSL 1 (best) BASIC0.31□□□□□ -2.36
UBA52P62987 AC068993.2-201ENST00000546563 395 ntTSL 5 BASIC0.31□□□□□ -2.36
UBA52P62987 LINC02461-201ENST00000553211 836 ntTSL 3 BASIC0.31□□□□□ -2.36
UBA52P62987 VN1R82P-201ENST00000601481 356 ntBASIC0.31□□□□□ -2.36
UBA52P62987 AC112250.2-201ENST00000609450 491 ntTSL 3 BASIC0.31□□□□□ -2.36
UBA52P62987 AC079416.3-201ENST00000624479 549 ntBASIC0.31□□□□□ -2.36
UBA52P62987 AC022513.1-201ENST00000624512 117 ntBASIC0.31□□□□□ -2.36
UBA52P62987 AC009950.2-201ENST00000636548 183 ntBASIC0.31□□□□□ -2.36
UBA52P62987 ATM-228ENST00000639240 498 ntTSL 5 BASIC0.31□□□□□ -2.36
UBA52P62987 PCF11-AS1-201ENST00000602322 1516 ntBASIC0.31□□□□□ -2.36
UBA52P62987 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC0.31□□□□□ -2.36
UBA52P62987 RNA5SP62-201ENST00000363457 110 ntBASIC0.3□□□□□ -2.36
UBA52P62987 RNU1-96P-201ENST00000364163 162 ntBASIC0.3□□□□□ -2.36
UBA52P62987 AL031577.2-201ENST00000404133 280 ntBASIC0.3□□□□□ -2.36
UBA52P62987 RNU6-77P-201ENST00000410554 91 ntBASIC0.3□□□□□ -2.36
UBA52P62987 AL592310.1-201ENST00000414330 671 ntBASIC0.3□□□□□ -2.36
UBA52P62987 ELOCP14-201ENST00000428070 331 ntBASIC0.3□□□□□ -2.36
UBA52P62987 ELOCP7-201ENST00000439968 331 ntBASIC0.3□□□□□ -2.36
UBA52P62987 AL354733.1-201ENST00000458016 476 ntTSL 3 BASIC0.3□□□□□ -2.36
UBA52P62987 AC013267.1-201ENST00000458227 267 ntBASIC0.3□□□□□ -2.36
UBA52P62987 MTND1P16-201ENST00000465177 898 ntBASIC0.3□□□□□ -2.36
UBA52P62987 RPL7P43-201ENST00000478876 753 ntBASIC0.3□□□□□ -2.36
UBA52P62987 LINC02032-201ENST00000490465 391 ntTSL 2 BASIC0.3□□□□□ -2.36
UBA52P62987 ARL2BPP5-201ENST00000523141 481 ntBASIC0.3□□□□□ -2.36
UBA52P62987 TRAV32-201ENST00000553993 340 ntBASIC0.3□□□□□ -2.36
UBA52P62987 AL118556.1-201ENST00000555257 502 ntTSL 2 BASIC0.3□□□□□ -2.36
UBA52P62987 AC105129.3-201ENST00000605455 485 ntBASIC0.3□□□□□ -2.36
UBA52P62987 AL590396.2-201ENST00000636511 1041 ntBASIC0.3□□□□□ -2.36
UBA52P62987 TPTE2-204ENST00000400103 1652 ntTSL 5 BASIC0.3□□□□□ -2.36
UBA52P62987 Y_RNA.178-201ENST00000363832 102 ntBASIC0.29□□□□□ -2.36
UBA52P62987 RPL22P22-201ENST00000395439 379 ntBASIC0.29□□□□□ -2.36
UBA52P62987 RNU6-564P-201ENST00000410983 104 ntBASIC0.29□□□□□ -2.36
UBA52P62987 AL590399.1-203ENST00000412631 256 ntTSL 5 BASIC0.29□□□□□ -2.36
UBA52P62987 MTCYBP38-201ENST00000417160 1123 ntBASIC0.29□□□□□ -2.36
UBA52P62987 AL451054.2-201ENST00000420896 202 ntBASIC0.29□□□□□ -2.36
UBA52P62987 FTH1P12-201ENST00000432137 551 ntBASIC0.29□□□□□ -2.36
UBA52P62987 MTND1P28-201ENST00000435623 950 ntBASIC0.29□□□□□ -2.36
UBA52P62987 MTND4P6-201ENST00000438297 472 ntBASIC0.29□□□□□ -2.36
UBA52P62987 MTND5P8-201ENST00000449817 1083 ntBASIC0.29□□□□□ -2.36
UBA52P62987 AC084024.2-201ENST00000503480 791 ntBASIC0.29□□□□□ -2.36
UBA52P62987 AC074344.1-201ENST00000512823 224 ntBASIC0.29□□□□□ -2.36
UBA52P62987 RNU4-57P-201ENST00000515980 135 ntBASIC0.29□□□□□ -2.36
UBA52P62987 RNU11-2P-201ENST00000516898 142 ntBASIC0.29□□□□□ -2.36
UBA52P62987 RNU6-586P-201ENST00000517265 104 ntBASIC0.29□□□□□ -2.36
UBA52P62987 AC090142.3-201ENST00000519012 385 ntBASIC0.29□□□□□ -2.36
UBA52P62987 TRIQK-209ENST00000519969 555 ntAPPRIS P1 TSL 4 BASIC0.29□□□□□ -2.36
UBA52P62987 AP003392.2-201ENST00000527269 208 ntBASIC0.29□□□□□ -2.36
UBA52P62987 AC084882.1-201ENST00000561254 555 ntTSL 4 BASIC0.29□□□□□ -2.36
UBA52P62987 MIR3169-201ENST00000578032 83 ntBASIC0.29□□□□□ -2.36
UBA52P62987 RNASEH2B-AS1-202ENST00000593369 648 ntTSL 5 BASIC0.29□□□□□ -2.36
UBA52P62987 AC023932.2-201ENST00000603176 175 ntBASIC0.29□□□□□ -2.36
UBA52P62987 AL118556.2-201ENST00000614375 824 ntBASIC0.29□□□□□ -2.36
UBA52P62987 HOTAIRM1_2.1-201ENST00000616712 215 ntBASIC0.29□□□□□ -2.36
UBA52P62987 MIR2909-201ENST00000617113 69 ntBASIC0.29□□□□□ -2.36
UBA52P62987 ZRANB2-AS2-222ENST00000625045 1014 ntTSL 5 BASIC0.29□□□□□ -2.36
UBA52P62987 PLD1-217ENST00000627725 174 ntTSL 5 BASIC0.29□□□□□ -2.36
UBA52P62987 CALCRL-202ENST00000409998 5223 ntAPPRIS P1 TSL 5 BASIC0.29□□□□□ -2.36
UBA52P62987 AC100821.1-201ENST00000523153 2479 ntBASIC0.28□□□□□ -2.36
UBA52P62987 ZNF849P-201ENST00000594711 1566 ntBASIC0.28□□□□□ -2.36
UBA52P62987 AC073544.1-201ENST00000600110 1595 ntBASIC0.28□□□□□ -2.36
UBA52P62987 PTPN22-206ENST00000525799 2118 ntTSL 1 (best) BASIC0.28□□□□□ -2.36
UBA52P62987 Y_RNA.255-201ENST00000364581 97 ntBASIC0.28□□□□□ -2.36
UBA52P62987 RNU1-39P-201ENST00000383897 165 ntBASIC0.28□□□□□ -2.36
UBA52P62987 RNU6-110P-201ENST00000384508 104 ntBASIC0.28□□□□□ -2.36
UBA52P62987 AC007435.1-201ENST00000421086 415 ntBASIC0.28□□□□□ -2.36
UBA52P62987 AC008267.5-201ENST00000424928 265 ntBASIC0.28□□□□□ -2.36
UBA52P62987 AL589986.2-201ENST00000429352 397 ntTSL 2 BASIC0.28□□□□□ -2.36
UBA52P62987 C8orf59P1-201ENST00000429930 303 ntBASIC0.28□□□□□ -2.36
UBA52P62987 AL357873.1-201ENST00000449215 282 ntTSL 3 BASIC0.28□□□□□ -2.36
UBA52P62987 AL160314.1-201ENST00000490836 438 ntBASIC0.28□□□□□ -2.36
Retrieved 100 of 98,524 protein–RNA pairs in 113.6 ms