Protein–RNA interactions for Protein: P55290

CDH13, Cadherin-13, humanhuman

Predictions only

Length 713 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13P55290 AC130469.1-201ENST00000597256 388 ntTSL 5 BASIC2.58□□□□□ -2
CDH13P55290 AL356575.1-201ENST00000603008 283 ntBASIC2.58□□□□□ -2
CDH13P55290 DISC2.1-201ENST00000612827 205 ntBASIC2.58□□□□□ -2
CDH13P55290 YWHAEP7-203ENST00000622054 312 ntBASIC2.58□□□□□ -2
CDH13P55290 AC010297.1-201ENST00000623948 149 ntBASIC2.58□□□□□ -2
CDH13P55290 AC109471.3-201ENST00000625219 233 ntTSL 5 BASIC2.58□□□□□ -2
CDH13P55290 FER-210ENST00000628534 558 ntTSL 5 BASIC2.58□□□□□ -2
CDH13P55290 RFESD-202ENST00000380005 2587 ntTSL 2 BASIC2.58□□□□□ -2
CDH13P55290 EFR3A-202ENST00000519656 5247 ntTSL 1 (best) BASIC2.58□□□□□ -2
CDH13P55290 ARHGAP11A-207ENST00000565905 3318 ntTSL 2 BASIC2.58□□□□□ -2
CDH13P55290 CACNB4-228ENST00000636598 7808 ntTSL 5 BASIC2.57□□□□□ -2
CDH13P55290 ZBTB26-202ENST00000373656 4443 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
CDH13P55290 RNU6-78P-201ENST00000362897 107 ntBASIC2.57□□□□□ -2
CDH13P55290 RNU6-266P-201ENST00000364225 107 ntBASIC2.57□□□□□ -2
CDH13P55290 Y_RNA.402-201ENST00000383972 102 ntBASIC2.57□□□□□ -2
CDH13P55290 TRAJ26-201ENST00000390511 60 ntAPPRIS P1 BASIC2.57□□□□□ -2
CDH13P55290 RNA5SP21-201ENST00000410917 96 ntBASIC2.57□□□□□ -2
CDH13P55290 AL513008.1-201ENST00000412701 161 ntTSL 5 BASIC2.57□□□□□ -2
CDH13P55290 AL109924.3-201ENST00000413324 393 ntTSL 2 BASIC2.57□□□□□ -2
CDH13P55290 RPLP0P7-201ENST00000416050 667 ntBASIC2.57□□□□□ -2
CDH13P55290 AC074117.2-201ENST00000417130 397 ntBASIC2.57□□□□□ -2
CDH13P55290 AC097463.2-201ENST00000421074 142 ntBASIC2.57□□□□□ -2
CDH13P55290 BX276092.3-201ENST00000424182 230 ntBASIC2.57□□□□□ -2
CDH13P55290 NAALADL2-AS1-201ENST00000426315 804 ntTSL 5 BASIC2.57□□□□□ -2
CDH13P55290 LINC02541-201ENST00000427157 327 ntTSL 3 BASIC2.57□□□□□ -2
CDH13P55290 AL353680.1-201ENST00000433788 337 ntTSL 3 BASIC2.57□□□□□ -2
CDH13P55290 AC007879.3-202ENST00000448786 823 ntTSL 1 (best) BASIC2.57□□□□□ -2
CDH13P55290 EEF1B2P7-201ENST00000451177 676 ntBASIC2.57□□□□□ -2
CDH13P55290 AC092567.1-201ENST00000452397 251 ntTSL 3 BASIC2.57□□□□□ -2
CDH13P55290 AL160162.1-201ENST00000456715 442 ntTSL 3 BASIC2.57□□□□□ -2
CDH13P55290 ODF2L-216ENST00000486215 311 ntTSL 2 BASIC2.57□□□□□ -2
CDH13P55290 LINC01326-201ENST00000495159 755 ntTSL 2 BASIC2.57□□□□□ -2
CDH13P55290 SMAD1-AS2-201ENST00000508936 1090 ntTSL 1 (best) BASIC2.57□□□□□ -2
CDH13P55290 Y_RNA.704-201ENST00000516851 102 ntBASIC2.57□□□□□ -2
CDH13P55290 MDM2-221ENST00000517852 393 ntTSL 1 (best) BASIC2.57□□□□□ -2
CDH13P55290 AC109329.1-201ENST00000518744 317 ntBASIC2.57□□□□□ -2
CDH13P55290 AC109635.3-201ENST00000529536 185 ntBASIC2.57□□□□□ -2
CDH13P55290 AC025043.1-201ENST00000558047 625 ntTSL 2 BASIC2.57□□□□□ -2
CDH13P55290 AC044840.1-201ENST00000577641 472 ntTSL 3 BASIC2.57□□□□□ -2
CDH13P55290 MIR3200-201ENST00000580767 85 ntBASIC2.57□□□□□ -2
CDH13P55290 AC021646.1-201ENST00000605469 484 ntBASIC2.57□□□□□ -2
CDH13P55290 AL121917.1-203ENST00000605534 577 ntBASIC2.57□□□□□ -2
CDH13P55290 AC002044.1-201ENST00000606707 158 ntBASIC2.57□□□□□ -2
CDH13P55290 AL449363.1-201ENST00000617815 186 ntBASIC2.57□□□□□ -2
CDH13P55290 AC103705.1-201ENST00000619013 241 ntBASIC2.57□□□□□ -2
CDH13P55290 AC024581.2-201ENST00000619986 252 ntBASIC2.57□□□□□ -2
CDH13P55290 AC098679.4-201ENST00000624241 654 ntBASIC2.57□□□□□ -2
CDH13P55290 U4.7-201ENST00000638126 106 ntBASIC2.57□□□□□ -2
CDH13P55290 C20orf24-208ENST00000639924 351 ntTSL 5 BASIC2.57□□□□□ -2
CDH13P55290 MCF2-208ENST00000519895 3346 ntAPPRIS ALT2 TSL 2 BASIC2.57□□□□□ -2
CDH13P55290 RBBP8P1-201ENST00000449447 1844 ntBASIC2.56□□□□□ -2
CDH13P55290 OLFM3-206ENST00000536598 2801 ntTSL 5 BASIC2.56□□□□□ -2
CDH13P55290 RNY4P14-201ENST00000363656 96 ntBASIC2.56□□□□□ -2
CDH13P55290 RNU4-66P-201ENST00000365199 138 ntBASIC2.56□□□□□ -2
CDH13P55290 RNU6-622P-201ENST00000384272 103 ntBASIC2.56□□□□□ -2
CDH13P55290 MIR514A2-201ENST00000385131 88 ntBASIC2.56□□□□□ -2
CDH13P55290 MIR514A3-201ENST00000385132 88 ntBASIC2.56□□□□□ -2
CDH13P55290 RNA5SP390-201ENST00000410191 113 ntBASIC2.56□□□□□ -2
CDH13P55290 USP9YP27-201ENST00000418455 438 ntBASIC2.56□□□□□ -2
CDH13P55290 AL121601.2-201ENST00000438019 707 ntBASIC2.56□□□□□ -2
CDH13P55290 LINC02041-201ENST00000440726 246 ntTSL 5 BASIC2.56□□□□□ -2
CDH13P55290 LINC01828-202ENST00000450294 955 ntTSL 5 BASIC2.56□□□□□ -2
CDH13P55290 IFT74-AS1-201ENST00000456198 405 ntTSL 2 BASIC2.56□□□□□ -2
CDH13P55290 AC133134.1-201ENST00000466800 359 ntBASIC2.56□□□□□ -2
CDH13P55290 AC023141.11-201ENST00000508864 202 ntBASIC2.56□□□□□ -2
CDH13P55290 AC139720.2-201ENST00000514766 440 ntTSL 2 BASIC2.56□□□□□ -2
CDH13P55290 SNORA31.23-201ENST00000517219 133 ntBASIC2.56□□□□□ -2
CDH13P55290 AC090136.1-201ENST00000520009 240 ntBASIC2.56□□□□□ -2
CDH13P55290 COPS8P3-201ENST00000526024 482 ntBASIC2.56□□□□□ -2
CDH13P55290 AC068205.1-204ENST00000532989 481 ntTSL 3 BASIC2.56□□□□□ -2
CDH13P55290 APAF1-207ENST00000547743 651 ntTSL 3 BASIC2.56□□□□□ -2
CDH13P55290 AC127894.1-201ENST00000548266 851 ntTSL 3 BASIC2.56□□□□□ -2
CDH13P55290 AL359237.1-201ENST00000554305 826 ntTSL 5 BASIC2.56□□□□□ -2
CDH13P55290 AC136619.2-201ENST00000563361 631 ntBASIC2.56□□□□□ -2
CDH13P55290 AC060766.3-201ENST00000591442 263 ntBASIC2.56□□□□□ -2
CDH13P55290 AC068790.6-201ENST00000602558 258 ntBASIC2.56□□□□□ -2
CDH13P55290 AL021997.1-201ENST00000605757 193 ntBASIC2.56□□□□□ -2
CDH13P55290 ZRANB2-AS2-222ENST00000625045 1014 ntTSL 5 BASIC2.56□□□□□ -2
CDH13P55290 AL358154.1-201ENST00000627075 444 ntTSL 3 BASIC2.56□□□□□ -2
CDH13P55290 AC009975.1-201ENST00000634588 2698 ntTSL 5 BASIC2.56□□□□□ -2
CDH13P55290 IL6ST-201ENST00000336909 8776 ntAPPRIS P1 TSL 2 BASIC2.56□□□□□ -2
CDH13P55290 SLC6A15-202ENST00000309283 3108 ntTSL 5 BASIC2.56□□□□□ -2
CDH13P55290 TEX9-207ENST00000560582 2005 ntTSL 3 BASIC2.56□□□□□ -2
CDH13P55290 Z75746.1-201ENST00000440243 2080 ntBASIC2.56□□□□□ -2
CDH13P55290 RPAP3-202ENST00000380650 2149 ntTSL 1 (best) BASIC2.56□□□□□ -2
CDH13P55290 UHMK1-204ENST00000545294 8117 ntTSL 2 BASIC2.55□□□□□ -2
CDH13P55290 RNU6-37P-201ENST00000362692 107 ntBASIC2.55□□□□□ -2
CDH13P55290 RNU6-1010P-201ENST00000362757 107 ntBASIC2.55□□□□□ -2
CDH13P55290 RNY3P3-201ENST00000363816 102 ntBASIC2.55□□□□□ -2
CDH13P55290 RNU6-11P-201ENST00000364234 107 ntBASIC2.55□□□□□ -2
CDH13P55290 RNU6-7-201ENST00000364784 107 ntBASIC2.55□□□□□ -2
CDH13P55290 RNU6-8-201ENST00000365467 107 ntBASIC2.55□□□□□ -2
CDH13P55290 RNU4-20P-201ENST00000365601 151 ntBASIC2.55□□□□□ -2
CDH13P55290 RNU6-25P-201ENST00000383873 107 ntBASIC2.55□□□□□ -2
CDH13P55290 RNU6-1-201ENST00000383898 107 ntBASIC2.55□□□□□ -2
CDH13P55290 RNU6-48P-201ENST00000384161 107 ntBASIC2.55□□□□□ -2
CDH13P55290 RNU6-36P-201ENST00000384172 107 ntBASIC2.55□□□□□ -2
CDH13P55290 RNU6-4P-201ENST00000384205 107 ntBASIC2.55□□□□□ -2
CDH13P55290 RNU6-5P-201ENST00000384238 107 ntBASIC2.55□□□□□ -2
CDH13P55290 RNU6-3P-201ENST00000384314 107 ntBASIC2.55□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 104 ms