Protein–RNA interactions for Protein: P53667

LIMK1, LIM domain kinase 1, humanhuman

Predictions only

Length 647 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1P53667 MTND3P25-201ENST00000509243 135 ntBASIC2.63□□□□□ -1.99
LIMK1P53667 AC091133.4-201ENST00000511142 308 ntBASIC2.63□□□□□ -1.99
LIMK1P53667 AC091887.1-201ENST00000514002 439 ntTSL 5 BASIC2.63□□□□□ -1.99
LIMK1P53667 MIR892C-201ENST00000516410 77 ntBASIC2.63□□□□□ -1.99
LIMK1P53667 RNU6-826P-201ENST00000516827 104 ntBASIC2.63□□□□□ -1.99
LIMK1P53667 AP003469.3-201ENST00000518090 473 ntTSL 3 BASIC2.63□□□□□ -1.99
LIMK1P53667 AC021242.2-203ENST00000521842 687 ntTSL 3 BASIC2.63□□□□□ -1.99
LIMK1P53667 AC010186.2-204ENST00000537668 439 ntBASIC2.63□□□□□ -1.99
LIMK1P53667 AP005062.1-201ENST00000581502 607 ntTSL 3 BASIC2.63□□□□□ -1.99
LIMK1P53667 AC245884.12-201ENST00000615364 59 ntBASIC2.63□□□□□ -1.99
LIMK1P53667 HOTAIRM1_5.1-201ENST00000619311 145 ntBASIC2.63□□□□□ -1.99
LIMK1P53667 AC005609.4-201ENST00000625071 447 ntBASIC2.63□□□□□ -1.99
LIMK1P53667 CDC27P3-201ENST00000635418 1910 ntBASIC2.63□□□□□ -1.99
LIMK1P53667 ZBED5-201ENST00000413761 2512 ntAPPRIS P1 TSL 1 (best) BASIC2.62□□□□□ -1.99
LIMK1P53667 RPL9P7-201ENST00000330965 580 ntBASIC2.62□□□□□ -1.99
LIMK1P53667 RNU4-75P-201ENST00000364621 146 ntBASIC2.62□□□□□ -1.99
LIMK1P53667 RNU6-715P-201ENST00000365204 103 ntBASIC2.62□□□□□ -1.99
LIMK1P53667 RNU1-100P-201ENST00000365255 165 ntBASIC2.62□□□□□ -1.99
LIMK1P53667 RNU6-996P-201ENST00000365438 107 ntBASIC2.62□□□□□ -1.99
LIMK1P53667 MIR218-1-201ENST00000384999 110 ntBASIC2.62□□□□□ -1.99
LIMK1P53667 MIR518D-201ENST00000385014 87 ntBASIC2.62□□□□□ -1.99
LIMK1P53667 SNORD37.1-201ENST00000390968 65 ntBASIC2.62□□□□□ -1.99
LIMK1P53667 MIR1289-2-201ENST00000408360 111 ntBASIC2.62□□□□□ -1.99
LIMK1P53667 AC004870.3-202ENST00000412996 432 ntTSL 3 BASIC2.62□□□□□ -1.99
LIMK1P53667 MTCO2P19-201ENST00000427513 598 ntBASIC2.62□□□□□ -1.99
LIMK1P53667 AC092573.2-202ENST00000437243 336 ntTSL 3 BASIC2.62□□□□□ -1.99
LIMK1P53667 HIGD1AP2-201ENST00000446367 280 ntBASIC2.62□□□□□ -1.99
LIMK1P53667 AL353705.4-201ENST00000449661 238 ntBASIC2.62□□□□□ -1.99
LIMK1P53667 AL118520.1-201ENST00000450770 291 ntBASIC2.62□□□□□ -1.99
LIMK1P53667 AP001324.2-201ENST00000461163 319 ntBASIC2.62□□□□□ -1.99
LIMK1P53667 SRRM1P2-201ENST00000464531 1192 ntBASIC2.62□□□□□ -1.99
LIMK1P53667 LINC01487-202ENST00000490497 423 ntTSL 3 BASIC2.62□□□□□ -1.99
LIMK1P53667 AC079943.1-201ENST00000491909 466 ntTSL 3 BASIC2.62□□□□□ -1.99
LIMK1P53667 AC008869.1-201ENST00000510938 442 ntTSL 2 BASIC2.62□□□□□ -1.99
LIMK1P53667 AP005902.1-201ENST00000521358 186 ntBASIC2.62□□□□□ -1.99
LIMK1P53667 OR5AQ1P-201ENST00000527596 927 ntBASIC2.62□□□□□ -1.99
LIMK1P53667 HPRT1P3-201ENST00000539521 576 ntBASIC2.62□□□□□ -1.99
LIMK1P53667 BNIP3P6-201ENST00000549284 499 ntBASIC2.62□□□□□ -1.99
LIMK1P53667 AGGF1P4-201ENST00000568249 801 ntBASIC2.62□□□□□ -1.99
LIMK1P53667 MTATP6P3-201ENST00000581686 676 ntBASIC2.62□□□□□ -1.99
LIMK1P53667 AP005671.1-201ENST00000581798 463 ntTSL 3 BASIC2.62□□□□□ -1.99
LIMK1P53667 LINC02210-208ENST00000585118 546 ntTSL 1 (best) BASIC2.62□□□□□ -1.99
LIMK1P53667 AC007621.1-201ENST00000604544 437 ntBASIC2.62□□□□□ -1.99
LIMK1P53667 AL021997.1-201ENST00000605757 193 ntBASIC2.62□□□□□ -1.99
LIMK1P53667 HULC.1-201ENST00000612720 240 ntBASIC2.62□□□□□ -1.99
LIMK1P53667 uc_338.14-201ENST00000613162 166 ntBASIC2.62□□□□□ -1.99
LIMK1P53667 AC105265.4-201ENST00000618391 306 ntTSL 5 BASIC2.62□□□□□ -1.99
LIMK1P53667 AC139792.3-201ENST00000623525 224 ntBASIC2.62□□□□□ -1.99
LIMK1P53667 PARPBP-203ENST00000392911 1916 ntTSL 5 BASIC2.62□□□□□ -1.99
LIMK1P53667 ZMYM1-203ENST00000373330 4203 ntAPPRIS P1 TSL 1 (best) BASIC2.61□□□□□ -1.99
LIMK1P53667 IL33-202ENST00000417746 2327 ntTSL 2 BASIC2.61□□□□□ -1.99
LIMK1P53667 SNORD14B-201ENST00000364533 90 ntBASIC2.61□□□□□ -1.99
LIMK1P53667 RNU6-517P-201ENST00000384362 110 ntBASIC2.61□□□□□ -1.99
LIMK1P53667 RNU6-393P-201ENST00000384475 107 ntBASIC2.61□□□□□ -1.99
LIMK1P53667 RNU6-748P-201ENST00000384648 107 ntBASIC2.61□□□□□ -1.99
LIMK1P53667 AL133475.1-201ENST00000404414 305 ntBASIC2.61□□□□□ -1.99
LIMK1P53667 MTCYBP8-201ENST00000422855 651 ntBASIC2.61□□□□□ -1.99
LIMK1P53667 GACAT1-202ENST00000441383 540 ntTSL 4 BASIC2.61□□□□□ -1.99
LIMK1P53667 LINC00393-201ENST00000443621 282 ntTSL 3 BASIC2.61□□□□□ -1.99
LIMK1P53667 GAS5-221ENST00000450589 632 ntTSL 1 (best) BASIC2.61□□□□□ -1.99
LIMK1P53667 RPL21P99-201ENST00000480369 423 ntBASIC2.61□□□□□ -1.99
LIMK1P53667 LINC02501-201ENST00000510420 426 ntTSL 2 BASIC2.61□□□□□ -1.99
LIMK1P53667 AC114316.1-201ENST00000511323 278 ntTSL 5 BASIC2.61□□□□□ -1.99
LIMK1P53667 LRRC34P2-201ENST00000514850 553 ntBASIC2.61□□□□□ -1.99
LIMK1P53667 SNORA31.6-201ENST00000516241 130 ntBASIC2.61□□□□□ -1.99
LIMK1P53667 IL7-206ENST00000520269 456 ntTSL 3 BASIC2.61□□□□□ -1.99
LIMK1P53667 RGS4-209ENST00000531057 544 ntTSL 4 BASIC2.61□□□□□ -1.99
LIMK1P53667 ELOCP31-201ENST00000540463 467 ntBASIC2.61□□□□□ -1.99
LIMK1P53667 MIR3605-201ENST00000583214 100 ntBASIC2.61□□□□□ -1.99
LIMK1P53667 RPS15AP11-201ENST00000594193 385 ntBASIC2.61□□□□□ -1.99
LIMK1P53667 AC008121.1-201ENST00000603244 268 ntBASIC2.61□□□□□ -1.99
LIMK1P53667 DAOA-AS1_2.1-201ENST00000614829 187 ntBASIC2.61□□□□□ -1.99
LIMK1P53667 AC026585.1-201ENST00000619582 524 ntBASIC2.61□□□□□ -1.99
LIMK1P53667 CYLC1-202ENST00000621735 379 ntAPPRIS ALT2 TSL 3 BASIC2.61□□□□□ -1.99
LIMK1P53667 CYP3A43-217ENST00000631161 328 ntTSL 5 BASIC2.61□□□□□ -1.99
LIMK1P53667 STX7-202ENST00000367941 15791 ntAPPRIS P1 TSL 1 (best) BASIC2.61□□□□□ -1.99
LIMK1P53667 HSFY2-201ENST00000304790 1444 ntAPPRIS P5 TSL 1 (best) BASIC2.6□□□□□ -1.99
LIMK1P53667 HSFY1-201ENST00000307393 1444 ntAPPRIS P5 TSL 1 (best) BASIC2.6□□□□□ -1.99
LIMK1P53667 LCOR-205ENST00000421806 16004 ntTSL 3 BASIC2.6□□□□□ -1.99
LIMK1P53667 AC138393.1-203ENST00000327086 343 ntBASIC2.6□□□□□ -1.99
LIMK1P53667 MIR26A1-201ENST00000362205 77 ntBASIC2.6□□□□□ -1.99
LIMK1P53667 RNA5SP289-201ENST00000362332 137 ntBASIC2.6□□□□□ -1.99
LIMK1P53667 MAPK8-202ENST00000374174 739 ntTSL 3 BASIC2.6□□□□□ -1.99
LIMK1P53667 SNORD70.1-201ENST00000391007 85 ntBASIC2.6□□□□□ -1.99
LIMK1P53667 AL356057.3-201ENST00000402607 340 ntBASIC2.6□□□□□ -1.99
LIMK1P53667 FTH1P15-201ENST00000406984 280 ntBASIC2.6□□□□□ -1.99
LIMK1P53667 AC004014.1-201ENST00000413406 538 ntTSL 4 BASIC2.6□□□□□ -1.99
LIMK1P53667 AL353621.1-201ENST00000418219 243 ntBASIC2.6□□□□□ -1.99
LIMK1P53667 LINC02559-201ENST00000420391 188 ntTSL 2 BASIC2.6□□□□□ -1.99
LIMK1P53667 DPH3P2-201ENST00000422618 250 ntBASIC2.6□□□□□ -1.99
LIMK1P53667 AL451060.1-203ENST00000431307 362 ntTSL 3 BASIC2.6□□□□□ -1.99
LIMK1P53667 AL606489.2-201ENST00000433886 234 ntBASIC2.6□□□□□ -1.99
LIMK1P53667 AC006026.2-201ENST00000457376 180 ntBASIC2.6□□□□□ -1.99
LIMK1P53667 SCARNA18-201ENST00000459004 134 ntBASIC2.6□□□□□ -1.99
LIMK1P53667 AC080013.2-201ENST00000460866 323 ntBASIC2.6□□□□□ -1.99
LIMK1P53667 AC073901.1-201ENST00000462471 408 ntBASIC2.6□□□□□ -1.99
LIMK1P53667 GMFBP1-201ENST00000467831 427 ntBASIC2.6□□□□□ -1.99
LIMK1P53667 RPL36AP48-201ENST00000485521 314 ntBASIC2.6□□□□□ -1.99
LIMK1P53667 RPL22P13-201ENST00000493291 347 ntBASIC2.6□□□□□ -1.99
LIMK1P53667 LINC02174-201ENST00000508977 553 ntTSL 3 BASIC2.6□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 114.7 ms