Protein–RNA interactions for Protein: P43378

PTPN9, Tyrosine-protein phosphatase non-receptor type 9, humanhuman

Predictions only

Length 593 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN9P43378 RNU5E-4P-201ENST00000364931 120 ntBASIC2.98□□□□□ -1.93
PTPN9P43378 SNORA44-201ENST00000384584 132 ntBASIC2.98□□□□□ -1.93
PTPN9P43378 HIST1H2APS3-201ENST00000403259 134 ntBASIC2.98□□□□□ -1.93
PTPN9P43378 VN1R36P-201ENST00000414936 291 ntBASIC2.98□□□□□ -1.93
PTPN9P43378 AC096649.2-201ENST00000416186 393 ntBASIC2.98□□□□□ -1.93
PTPN9P43378 PDCL2P1-201ENST00000419302 352 ntBASIC2.98□□□□□ -1.93
PTPN9P43378 AL365400.1-201ENST00000431854 640 ntBASIC2.98□□□□□ -1.93
PTPN9P43378 AL135923.2-201ENST00000435444 501 ntTSL 2 BASIC2.98□□□□□ -1.93
PTPN9P43378 RPS15AP5-201ENST00000436276 388 ntBASIC2.98□□□□□ -1.93
PTPN9P43378 AC004936.1-201ENST00000451755 361 ntTSL 3 BASIC2.98□□□□□ -1.93
PTPN9P43378 AC091951.2-201ENST00000500762 203 ntBASIC2.98□□□□□ -1.93
PTPN9P43378 AC008628.2-201ENST00000502605 298 ntBASIC2.98□□□□□ -1.93
PTPN9P43378 AL359273.1-202ENST00000505585 905 ntTSL 1 (best) BASIC2.98□□□□□ -1.93
PTPN9P43378 AC110799.1-201ENST00000509098 449 ntTSL 3 BASIC2.98□□□□□ -1.93
PTPN9P43378 TBCAP3-201ENST00000512475 312 ntBASIC2.98□□□□□ -1.93
PTPN9P43378 RNU6-323P-201ENST00000521915 107 ntBASIC2.98□□□□□ -1.93
PTPN9P43378 AL359237.1-201ENST00000554305 826 ntTSL 5 BASIC2.98□□□□□ -1.93
PTPN9P43378 AC026462.2-201ENST00000565771 286 ntTSL 2 BASIC2.98□□□□□ -1.93
PTPN9P43378 AC005498.1-201ENST00000592125 465 ntBASIC2.98□□□□□ -1.93
PTPN9P43378 UBE2E2-206ENST00000613545 282 ntTSL 5 BASIC2.98□□□□□ -1.93
PTPN9P43378 AL138726.1-201ENST00000614873 333 ntBASIC2.98□□□□□ -1.93
PTPN9P43378 CDKN3-212ENST00000620759 196 ntTSL 5 BASIC2.98□□□□□ -1.93
PTPN9P43378 RMST_7.1-201ENST00000621935 268 ntBASIC2.98□□□□□ -1.93
PTPN9P43378 MIR3199-2-201ENST00000636243 86 ntBASIC2.98□□□□□ -1.93
PTPN9P43378 AP003122.5-201ENST00000527668 3766 ntBASIC2.98□□□□□ -1.93
PTPN9P43378 RBBP8-202ENST00000360790 2962 ntTSL 1 (best) BASIC2.98□□□□□ -1.93
PTPN9P43378 NBPF20-202ENST00000392971 18450 ntAPPRIS P2 TSL 5 BASIC2.98□□□□□ -1.93
PTPN9P43378 LTN1-201ENST00000361371 7685 ntAPPRIS P1 TSL 1 (best) BASIC2.98□□□□□ -1.93
PTPN9P43378 MTND4P12-201ENST00000498999 1377 ntBASIC2.98□□□□□ -1.93
PTPN9P43378 FAM46D-201ENST00000308293 3011 ntAPPRIS P1 TSL 1 (best) BASIC2.98□□□□□ -1.93
PTPN9P43378 MCF2-208ENST00000519895 3346 ntAPPRIS ALT2 TSL 2 BASIC2.98□□□□□ -1.93
PTPN9P43378 LRIF1-203ENST00000494675 1912 ntAPPRIS ALT2 TSL 2 BASIC2.97□□□□□ -1.93
PTPN9P43378 TFEC-202ENST00000320239 6605 ntAPPRIS P1 TSL 1 (best) BASIC2.97□□□□□ -1.93
PTPN9P43378 NOX4-202ENST00000343727 3347 ntTSL 2 BASIC2.97□□□□□ -1.93
PTPN9P43378 OFD1P6Y-202ENST00000451061 2724 ntBASIC2.97□□□□□ -1.93
PTPN9P43378 RNU1-105P-201ENST00000363470 161 ntBASIC2.97□□□□□ -1.93
PTPN9P43378 Y_RNA.301-201ENST00000364990 103 ntBASIC2.97□□□□□ -1.93
PTPN9P43378 SNORD81.2-201ENST00000365153 76 ntBASIC2.97□□□□□ -1.93
PTPN9P43378 RNU6-214P-201ENST00000384130 107 ntBASIC2.97□□□□□ -1.93
PTPN9P43378 RNU6-1009P-201ENST00000390996 107 ntBASIC2.97□□□□□ -1.93
PTPN9P43378 UBA52P6-201ENST00000399822 382 ntBASIC2.97□□□□□ -1.93
PTPN9P43378 AC023141.4-201ENST00000412031 328 ntBASIC2.97□□□□□ -1.93
PTPN9P43378 EEF1A1P41-201ENST00000414667 207 ntBASIC2.97□□□□□ -1.93
PTPN9P43378 AL356277.2-201ENST00000421318 441 ntTSL 2 BASIC2.97□□□□□ -1.93
PTPN9P43378 PGBD4P6-201ENST00000421501 610 ntBASIC2.97□□□□□ -1.93
PTPN9P43378 AL139397.1-201ENST00000430456 644 ntTSL 2 BASIC2.97□□□□□ -1.93
PTPN9P43378 HIGD1AP2-201ENST00000446367 280 ntBASIC2.97□□□□□ -1.93
PTPN9P43378 MIR1302-2HG-201ENST00000469289 535 ntTSL 5 BASIC2.97□□□□□ -1.93
PTPN9P43378 MTCO1P29-201ENST00000496868 288 ntBASIC2.97□□□□□ -1.93
PTPN9P43378 RNU6-875P-201ENST00000516488 106 ntBASIC2.97□□□□□ -1.93
PTPN9P43378 AC006199.1-201ENST00000548728 219 ntBASIC2.97□□□□□ -1.93
PTPN9P43378 MIR3200-201ENST00000580767 85 ntBASIC2.97□□□□□ -1.93
PTPN9P43378 OR1M4P-201ENST00000589199 287 ntBASIC2.97□□□□□ -1.93
PTPN9P43378 AC024153.1-201ENST00000603103 365 ntBASIC2.97□□□□□ -1.93
PTPN9P43378 AC104260.1-201ENST00000616660 539 ntBASIC2.97□□□□□ -1.93
PTPN9P43378 FNBP1L-203ENST00000370253 3889 ntAPPRIS ALT1 TSL 5 BASIC2.97□□□□□ -1.93
PTPN9P43378 ADAM3A-203ENST00000461344 2157 ntBASIC2.97□□□□□ -1.93
PTPN9P43378 FGF14-201ENST00000376131 12882 ntTSL 1 (best) BASIC2.96□□□□□ -1.93
PTPN9P43378 FAM184A-202ENST00000352896 3700 ntAPPRIS ALT1 TSL 1 (best) BASIC2.96□□□□□ -1.93
PTPN9P43378 CHD9-203ENST00000447540 11509 ntTSL 5 BASIC2.96□□□□□ -1.94
PTPN9P43378 PCDH11Y-201ENST00000215473 4595 ntAPPRIS ALT2 TSL 1 (best) BASIC2.96□□□□□ -1.94
PTPN9P43378 PRKG2-206ENST00000545647 3852 ntTSL 5 BASIC2.96□□□□□ -1.94
PTPN9P43378 RNU1-100P-201ENST00000365255 165 ntBASIC2.96□□□□□ -1.94
PTPN9P43378 RNU6-898P-201ENST00000365627 104 ntBASIC2.96□□□□□ -1.94
PTPN9P43378 MIR181B1-201ENST00000385240 110 ntBASIC2.96□□□□□ -1.94
PTPN9P43378 AL360182.1-201ENST00000397433 468 ntBASIC2.96□□□□□ -1.94
PTPN9P43378 RNU2-41P-201ENST00000410991 178 ntBASIC2.96□□□□□ -1.94
PTPN9P43378 SNORD56-201ENST00000413522 71 ntBASIC2.96□□□□□ -1.94
PTPN9P43378 AC016831.2-201ENST00000417179 352 ntBASIC2.96□□□□□ -1.94
PTPN9P43378 AC010967.2-201ENST00000418451 333 ntTSL 2 BASIC2.96□□□□□ -1.94
PTPN9P43378 UBE2V1P4-201ENST00000425374 344 ntBASIC2.96□□□□□ -1.94
PTPN9P43378 AL024508.1-201ENST00000432477 505 ntTSL 2 BASIC2.96□□□□□ -1.94
PTPN9P43378 AL157937.1-201ENST00000435092 443 ntTSL 3 BASIC2.96□□□□□ -1.94
PTPN9P43378 AC013470.1-201ENST00000453438 462 ntBASIC2.96□□□□□ -1.94
PTPN9P43378 RPL7P43-201ENST00000478876 753 ntBASIC2.96□□□□□ -1.94
PTPN9P43378 AC096736.2-201ENST00000507972 175 ntTSL 3 BASIC2.96□□□□□ -1.94
PTPN9P43378 PANCR-202ENST00000513690 448 ntTSL 2 BASIC2.96□□□□□ -1.94
PTPN9P43378 Y_RNA.687-201ENST00000516558 91 ntBASIC2.96□□□□□ -1.94
PTPN9P43378 RNU7-30P-201ENST00000516835 62 ntBASIC2.96□□□□□ -1.94
PTPN9P43378 AC090568.2-205ENST00000518631 576 ntTSL 4 BASIC2.96□□□□□ -1.94
PTPN9P43378 AC022080.3-201ENST00000544433 482 ntBASIC2.96□□□□□ -1.94
PTPN9P43378 AC025281.1-201ENST00000567026 265 ntBASIC2.96□□□□□ -1.94
PTPN9P43378 MIR3672-201ENST00000584290 82 ntBASIC2.96□□□□□ -1.94
PTPN9P43378 MIR3942-201ENST00000585264 109 ntBASIC2.96□□□□□ -1.94
PTPN9P43378 AC008121.1-201ENST00000603244 268 ntBASIC2.96□□□□□ -1.94
PTPN9P43378 RNU6-85P-201ENST00000605989 107 ntBASIC2.96□□□□□ -1.94
PTPN9P43378 AC063943.3-201ENST00000615562 356 ntBASIC2.96□□□□□ -1.94
PTPN9P43378 SLC4A7-201ENST00000295736 7757 ntAPPRIS P3 TSL 1 (best) BASIC2.96□□□□□ -1.94
PTPN9P43378 ARHGAP5-202ENST00000345122 9604 ntAPPRIS P3 TSL 5 BASIC2.95□□□□□ -1.94
PTPN9P43378 LINC01592-202ENST00000518540 2367 ntTSL 2 BASIC2.95□□□□□ -1.94
PTPN9P43378 NEDD4-208ENST00000508342 7235 ntTSL 1 (best) BASIC2.95□□□□□ -1.94
PTPN9P43378 MINDY3-202ENST00000378036 2452 ntTSL 2 BASIC2.95□□□□□ -1.94
PTPN9P43378 ZMYM1-210ENST00000611874 4466 ntAPPRIS P1 TSL 2 BASIC2.95□□□□□ -1.94
PTPN9P43378 MME-216ENST00000615825 5523 ntAPPRIS P1 TSL 1 (best) BASIC2.95□□□□□ -1.94
PTPN9P43378 OR13G1-202ENST00000642119 2568 ntAPPRIS P1 BASIC2.95□□□□□ -1.94
PTPN9P43378 HDX-206ENST00000506585 6158 ntTSL 2 BASIC2.95□□□□□ -1.94
PTPN9P43378 RPL9P7-201ENST00000330965 580 ntBASIC2.95□□□□□ -1.94
PTPN9P43378 RNU6-942P-201ENST00000363002 107 ntBASIC2.95□□□□□ -1.94
PTPN9P43378 RNU6-1027P-201ENST00000383998 107 ntBASIC2.95□□□□□ -1.94
PTPN9P43378 TTTY8-202ENST00000426035 518 ntTSL 1 (best) BASIC2.95□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 86.6 ms