Protein–RNA interactions for Protein: P43307

SSR1, Translocon-associated protein subunit alpha, humanhuman

Known RBP Predictions only

Length 286 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1P43307 Y_RNA.560-201ENST00000384689 102 ntBASIC1.9□□□□□ -2.11
SSR1P43307 RNA5SP212-201ENST00000391223 107 ntBASIC1.9□□□□□ -2.11
SSR1P43307 RNU6-195P-201ENST00000411352 109 ntBASIC1.9□□□□□ -2.11
SSR1P43307 AC127391.1-201ENST00000411737 98 ntBASIC1.9□□□□□ -2.11
SSR1P43307 KRTAP25-1-201ENST00000416044 370 ntAPPRIS P1 BASIC1.9□□□□□ -2.11
SSR1P43307 LINC01817-201ENST00000429317 564 ntTSL 4 BASIC1.9□□□□□ -2.11
SSR1P43307 AC008568.1-203ENST00000433406 765 ntTSL 3 BASIC1.9□□□□□ -2.11
SSR1P43307 AC104850.1-201ENST00000435940 476 ntBASIC1.9□□□□□ -2.11
SSR1P43307 AL121957.1-201ENST00000441532 338 ntTSL 2 BASIC1.9□□□□□ -2.11
SSR1P43307 KATNBL1P6-201ENST00000453433 915 ntBASIC1.9□□□□□ -2.11
SSR1P43307 CYP2C59P-201ENST00000457790 269 ntBASIC1.9□□□□□ -2.11
SSR1P43307 RNU7-125P-201ENST00000458760 62 ntBASIC1.9□□□□□ -2.11
SSR1P43307 SNORD11.1-201ENST00000459482 85 ntBASIC1.9□□□□□ -2.11
SSR1P43307 RPL30P12-201ENST00000474666 353 ntBASIC1.9□□□□□ -2.11
SSR1P43307 HMGB1P30-201ENST00000492455 606 ntBASIC1.9□□□□□ -2.11
SSR1P43307 AC099520.1-202ENST00000503650 777 ntTSL 3 BASIC1.9□□□□□ -2.11
SSR1P43307 AC092436.1-201ENST00000506450 503 ntBASIC1.9□□□□□ -2.11
SSR1P43307 RNU6-965P-201ENST00000516721 96 ntBASIC1.9□□□□□ -2.11
SSR1P43307 AC022616.3-201ENST00000523940 148 ntBASIC1.9□□□□□ -2.11
SSR1P43307 AC114550.2-201ENST00000524008 397 ntTSL 3 BASIC1.9□□□□□ -2.11
SSR1P43307 AP003392.2-201ENST00000527269 208 ntBASIC1.9□□□□□ -2.11
SSR1P43307 AL035078.1-202ENST00000531627 413 ntTSL 2 BASIC1.9□□□□□ -2.11
SSR1P43307 ADI1P3-201ENST00000549509 470 ntBASIC1.9□□□□□ -2.11
SSR1P43307 AC110588.1-201ENST00000559699 137 ntBASIC1.9□□□□□ -2.11
SSR1P43307 AC009120.5-201ENST00000561669 475 ntTSL 5 BASIC1.9□□□□□ -2.11
SSR1P43307 AC024614.2-201ENST00000577584 372 ntBASIC1.9□□□□□ -2.11
SSR1P43307 MIR4713-201ENST00000582691 75 ntBASIC1.9□□□□□ -2.11
SSR1P43307 MIR548AC-201ENST00000585049 88 ntBASIC1.9□□□□□ -2.11
SSR1P43307 AC078795.2-201ENST00000602835 1252 ntBASIC1.9□□□□□ -2.11
SSR1P43307 AL670379.4-201ENST00000605279 254 ntBASIC1.9□□□□□ -2.11
SSR1P43307 AL359547.2-201ENST00000615810 418 ntBASIC1.9□□□□□ -2.11
SSR1P43307 WWP1P1-201ENST00000466609 2769 ntBASIC1.9□□□□□ -2.11
SSR1P43307 MT-CYB-201ENST00000361789 1141 ntAPPRIS P1 BASIC1.89□□□□□ -2.11
SSR1P43307 RNU6-944P-201ENST00000364023 107 ntBASIC1.89□□□□□ -2.11
SSR1P43307 RNA5SP240-201ENST00000365355 128 ntBASIC1.89□□□□□ -2.11
SSR1P43307 SNORA40.18-201ENST00000391200 128 ntBASIC1.89□□□□□ -2.11
SSR1P43307 LINC00301-202ENST00000412599 772 ntTSL 1 (best) BASIC1.89□□□□□ -2.11
SSR1P43307 EEF1A1P40-201ENST00000412883 573 ntBASIC1.89□□□□□ -2.11
SSR1P43307 AC003985.1-201ENST00000414127 362 ntTSL 3 BASIC1.89□□□□□ -2.11
SSR1P43307 C1DP2-201ENST00000418167 426 ntBASIC1.89□□□□□ -2.11
SSR1P43307 USP9YP12-201ENST00000450481 570 ntBASIC1.89□□□□□ -2.11
SSR1P43307 HYDIN2-201ENST00000493714 554 ntTSL 4 BASIC1.89□□□□□ -2.11
SSR1P43307 AC021146.2-201ENST00000504736 556 ntBASIC1.89□□□□□ -2.11
SSR1P43307 RPL23AP94-201ENST00000512518 302 ntBASIC1.89□□□□□ -2.11
SSR1P43307 SCARNA24.1-201ENST00000516465 137 ntBASIC1.89□□□□□ -2.11
SSR1P43307 RNU6-759P-201ENST00000516740 103 ntBASIC1.89□□□□□ -2.11
SSR1P43307 HDAC2-AS2-206ENST00000517965 850 ntTSL 3 BASIC1.89□□□□□ -2.11
SSR1P43307 AC034114.1-201ENST00000520293 285 ntBASIC1.89□□□□□ -2.11
SSR1P43307 AC124290.1-202ENST00000523342 387 ntTSL 3 BASIC1.89□□□□□ -2.11
SSR1P43307 AC090124.2-201ENST00000527727 563 ntTSL 4 BASIC1.89□□□□□ -2.11
SSR1P43307 AC123905.1-201ENST00000552098 541 ntTSL 4 BASIC1.89□□□□□ -2.11
SSR1P43307 AC091544.5-202ENST00000568297 374 ntTSL 3 BASIC1.89□□□□□ -2.11
SSR1P43307 AC005771.1-201ENST00000585581 349 ntBASIC1.89□□□□□ -2.11
SSR1P43307 AC112191.3-201ENST00000604371 277 ntBASIC1.89□□□□□ -2.11
SSR1P43307 AL022161.1-201ENST00000604390 213 ntBASIC1.89□□□□□ -2.11
SSR1P43307 AC012360.2-201ENST00000609349 391 ntBASIC1.89□□□□□ -2.11
SSR1P43307 AC138749.5-201ENST00000611461 208 ntBASIC1.89□□□□□ -2.11
SSR1P43307 AC116165.2-201ENST00000616705 206 ntBASIC1.89□□□□□ -2.11
SSR1P43307 ZEB2_AS1_1.1-201ENST00000621504 128 ntBASIC1.89□□□□□ -2.11
SSR1P43307 ASPM-202ENST00000367408 3747 ntTSL 1 (best) BASIC1.89□□□□□ -2.11
SSR1P43307 NEDD1-204ENST00000457368 3162 ntTSL 2 BASIC1.88□□□□□ -2.11
SSR1P43307 LRIF1-203ENST00000494675 1912 ntAPPRIS ALT2 TSL 2 BASIC1.88□□□□□ -2.11
SSR1P43307 AC073343.1-201ENST00000328239 651 ntBASIC1.88□□□□□ -2.11
SSR1P43307 MIR412-201ENST00000362142 91 ntBASIC1.88□□□□□ -2.11
SSR1P43307 RNU6-743P-201ENST00000364151 106 ntBASIC1.88□□□□□ -2.11
SSR1P43307 C6orf62-201ENST00000378102 741 ntTSL 5 BASIC1.88□□□□□ -2.11
SSR1P43307 SNORA70B-201ENST00000384210 135 ntBASIC1.88□□□□□ -2.11
SSR1P43307 SNORA40.19-201ENST00000390846 128 ntBASIC1.88□□□□□ -2.11
SSR1P43307 RPS3AP36-201ENST00000398190 775 ntBASIC1.88□□□□□ -2.11
SSR1P43307 MRPL42P2-201ENST00000403169 426 ntBASIC1.88□□□□□ -2.11
SSR1P43307 RNU2-48P-201ENST00000410694 191 ntBASIC1.88□□□□□ -2.11
SSR1P43307 RPL21P90-201ENST00000415692 466 ntBASIC1.88□□□□□ -2.11
SSR1P43307 AC063965.1-201ENST00000416679 499 ntTSL 3 BASIC1.88□□□□□ -2.11
SSR1P43307 AL627311.1-201ENST00000431514 115 ntBASIC1.88□□□□□ -2.11
SSR1P43307 LINC01549-201ENST00000440664 714 ntTSL 3 BASIC1.88□□□□□ -2.11
SSR1P43307 UBE2D3P4-201ENST00000441973 436 ntBASIC1.88□□□□□ -2.11
SSR1P43307 AC012308.1-201ENST00000451232 178 ntBASIC1.88□□□□□ -2.11
SSR1P43307 AC004936.1-201ENST00000451755 361 ntTSL 3 BASIC1.88□□□□□ -2.11
SSR1P43307 TH2LCRR-203ENST00000457489 439 ntTSL 3 BASIC1.88□□□□□ -2.11
SSR1P43307 RPL21P99-201ENST00000480369 423 ntBASIC1.88□□□□□ -2.11
SSR1P43307 MTND2P14-201ENST00000482139 351 ntBASIC1.88□□□□□ -2.11
SSR1P43307 RN7SKP265-201ENST00000516448 223 ntBASIC1.88□□□□□ -2.11
SSR1P43307 SNORA48.11-201ENST00000517015 89 ntBASIC1.88□□□□□ -2.11
SSR1P43307 RNU6-586P-201ENST00000517265 104 ntBASIC1.88□□□□□ -2.11
SSR1P43307 BNIP3P6-201ENST00000549284 499 ntBASIC1.88□□□□□ -2.11
SSR1P43307 AC007375.1-201ENST00000554513 578 ntBASIC1.88□□□□□ -2.11
SSR1P43307 AC008521.1-201ENST00000587471 187 ntBASIC1.88□□□□□ -2.11
SSR1P43307 AC100781.1-201ENST00000597142 383 ntTSL 3 BASIC1.88□□□□□ -2.11
SSR1P43307 AC174048.1-201ENST00000603389 144 ntBASIC1.88□□□□□ -2.11
SSR1P43307 AC009878.1-201ENST00000621819 340 ntBASIC1.88□□□□□ -2.11
SSR1P43307 AC097372.5-201ENST00000623665 376 ntBASIC1.88□□□□□ -2.11
SSR1P43307 AC019226.2-201ENST00000625973 424 ntBASIC1.88□□□□□ -2.11
SSR1P43307 CYP3A43-217ENST00000631161 328 ntTSL 5 BASIC1.88□□□□□ -2.11
SSR1P43307 AC068733.3-201ENST00000632757 269 ntTSL 3 BASIC1.88□□□□□ -2.11
SSR1P43307 AC092881.1-201ENST00000638218 2733 ntBASIC1.87□□□□□ -2.11
SSR1P43307 snoU2_19.1-201ENST00000362361 80 ntBASIC1.87□□□□□ -2.11
SSR1P43307 RNU6-212P-201ENST00000362642 104 ntBASIC1.87□□□□□ -2.11
SSR1P43307 SNORD56.1-201ENST00000362913 68 ntBASIC1.87□□□□□ -2.11
SSR1P43307 RNU6-61P-201ENST00000365528 109 ntBASIC1.87□□□□□ -2.11
SSR1P43307 RNU6-843P-201ENST00000384454 104 ntBASIC1.87□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 107.5 ms