Protein–RNA interactions for Protein: P28702

RXRB, Retinoic acid receptor RXR-beta, humanhuman

Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RXRBP28702 RNU6-953P-201ENST00000459154 107 ntBASIC4.67□□□□□ -1.66
RXRBP28702 RNU7-120P-201ENST00000459334 63 ntBASIC4.67□□□□□ -1.66
RXRBP28702 PPBPP1-201ENST00000510807 373 ntBASIC4.67□□□□□ -1.66
RXRBP28702 AC008892.1-201ENST00000511861 384 ntTSL 3 BASIC4.67□□□□□ -1.66
RXRBP28702 Y_RNA.713-201ENST00000517013 96 ntBASIC4.67□□□□□ -1.66
RXRBP28702 NRG1-IT1-203ENST00000523743 292 ntTSL 3 BASIC4.67□□□□□ -1.66
RXRBP28702 AC087463.2-201ENST00000565943 472 ntTSL 3 BASIC4.67□□□□□ -1.66
RXRBP28702 MIR4300-201ENST00000581016 96 ntBASIC4.67□□□□□ -1.66
RXRBP28702 CT45A5-202ENST00000617203 726 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
RXRBP28702 MIR4727-201ENST00000622232 55 ntBASIC4.67□□□□□ -1.66
RXRBP28702 INPP4B-215ENST00000509777 4334 ntTSL 5 BASIC4.67□□□□□ -1.66
RXRBP28702 AC093908.1-201ENST00000623125 8092 ntBASIC4.67□□□□□ -1.66
RXRBP28702 CEP295-201ENST00000325212 8057 ntAPPRIS P2 TSL 2 BASIC4.66□□□□□ -1.66
RXRBP28702 CNTN1-201ENST00000347616 5507 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
RXRBP28702 MS4A1-212ENST00000534668 3475 ntAPPRIS P1 TSL 2 BASIC4.66□□□□□ -1.66
RXRBP28702 MAPK10-253ENST00000641010 4072 ntBASIC4.66□□□□□ -1.66
RXRBP28702 KIAA1456-203ENST00000524591 9587 ntAPPRIS P1 TSL 5 BASIC4.66□□□□□ -1.66
RXRBP28702 MYSM1-203ENST00000472487 7785 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
RXRBP28702 SNORD81.1-201ENST00000363064 77 ntBASIC4.66□□□□□ -1.66
RXRBP28702 RNU6-1155P-201ENST00000363554 107 ntBASIC4.66□□□□□ -1.66
RXRBP28702 Y_RNA.324-201ENST00000365165 102 ntBASIC4.66□□□□□ -1.66
RXRBP28702 RNU6-378P-201ENST00000384324 107 ntBASIC4.66□□□□□ -1.66
RXRBP28702 MIR628-201ENST00000385229 95 ntBASIC4.66□□□□□ -1.66
RXRBP28702 RNA5SP39-201ENST00000411245 120 ntBASIC4.66□□□□□ -1.66
RXRBP28702 PLCL2-AS1-201ENST00000414844 311 ntTSL 2 BASIC4.66□□□□□ -1.66
RXRBP28702 SSXP9-201ENST00000417503 292 ntBASIC4.66□□□□□ -1.66
RXRBP28702 AP000235.1-201ENST00000424017 479 ntTSL 3 BASIC4.66□□□□□ -1.66
RXRBP28702 LAMTOR3P1-201ENST00000428620 370 ntBASIC4.66□□□□□ -1.66
RXRBP28702 KRTAP19-11P-201ENST00000439851 104 ntBASIC4.66□□□□□ -1.66
RXRBP28702 AC034195.1-202ENST00000451031 610 ntTSL 3 BASIC4.66□□□□□ -1.66
RXRBP28702 RPL37P6-202ENST00000464216 403 ntBASIC4.66□□□□□ -1.66
RXRBP28702 TRBV12-1-201ENST00000479785 344 ntBASIC4.66□□□□□ -1.66
RXRBP28702 SUMO2P6-201ENST00000505273 288 ntBASIC4.66□□□□□ -1.66
RXRBP28702 RNU1-86P-201ENST00000516108 154 ntBASIC4.66□□□□□ -1.66
RXRBP28702 RNU1-107P-201ENST00000516617 154 ntBASIC4.66□□□□□ -1.66
RXRBP28702 IGLV3-26-201ENST00000520756 302 ntBASIC4.66□□□□□ -1.66
RXRBP28702 KIRREL3-AS2-201ENST00000532988 492 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
RXRBP28702 OR4H12P-201ENST00000556269 907 ntBASIC4.66□□□□□ -1.66
RXRBP28702 MAFTRR-204ENST00000568389 506 ntTSL 4 BASIC4.66□□□□□ -1.66
RXRBP28702 AC008962.1-201ENST00000605729 304 ntBASIC4.66□□□□□ -1.66
RXRBP28702 CACNB4-257ENST00000637547 7658 ntTSL 5 BASIC4.66□□□□□ -1.66
RXRBP28702 Z75746.1-201ENST00000440243 2080 ntBASIC4.66□□□□□ -1.66
RXRBP28702 AL136360.1-201ENST00000503377 1900 ntBASIC4.66□□□□□ -1.66
RXRBP28702 DGKI-204ENST00000453654 12928 ntAPPRIS ALT2 TSL 1 (best) BASIC4.66□□□□□ -1.66
RXRBP28702 GLIPR1-201ENST00000266659 5877 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
RXRBP28702 GABRG2-214ENST00000639111 11735 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.66
RXRBP28702 RTN4-208ENST00000404909 4102 ntTSL 1 (best) BASIC4.65□□□□□ -1.66
RXRBP28702 PSG1-205ENST00000595124 1692 ntTSL 2 BASIC4.65□□□□□ -1.66
RXRBP28702 C12orf45-204ENST00000552951 23529 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.66
RXRBP28702 CNOT6L-201ENST00000504123 8843 ntAPPRIS P1 TSL 2 BASIC4.65□□□□□ -1.66
RXRBP28702 MT-ND1-201ENST00000361390 956 ntAPPRIS P1 BASIC4.65□□□□□ -1.67
RXRBP28702 Y_RNA.27-201ENST00000362540 103 ntBASIC4.65□□□□□ -1.67
RXRBP28702 Y_RNA.83-201ENST00000363005 113 ntBASIC4.65□□□□□ -1.67
RXRBP28702 RNU6-682P-201ENST00000363843 106 ntBASIC4.65□□□□□ -1.67
RXRBP28702 RNU6-1317P-201ENST00000364582 104 ntBASIC4.65□□□□□ -1.67
RXRBP28702 Y_RNA.793-201ENST00000411222 111 ntBASIC4.65□□□□□ -1.67
RXRBP28702 AC007098.1-201ENST00000420122 367 ntBASIC4.65□□□□□ -1.67
RXRBP28702 RPS15AP6-201ENST00000420703 385 ntBASIC4.65□□□□□ -1.67
RXRBP28702 RPS20P22-201ENST00000473700 357 ntBASIC4.65□□□□□ -1.67
RXRBP28702 AL359273.1-201ENST00000510918 627 ntBASIC4.65□□□□□ -1.67
RXRBP28702 AC008716.1-201ENST00000511084 513 ntBASIC4.65□□□□□ -1.67
RXRBP28702 AC109927.1-202ENST00000511951 282 ntTSL 3 BASIC4.65□□□□□ -1.67
RXRBP28702 AC008694.2-201ENST00000517591 306 ntBASIC4.65□□□□□ -1.67
RXRBP28702 NCBP1-205ENST00000629069 249 ntTSL 5 BASIC4.65□□□□□ -1.67
RXRBP28702 SYNE2-203ENST00000357395 21555 ntTSL 5 BASIC4.65□□□□□ -1.67
RXRBP28702 PPP2R5A-205ENST00000537030 1719 ntTSL 2 BASIC4.65□□□□□ -1.67
RXRBP28702 AL591441.1-201ENST00000618108 2247 ntTSL 2 BASIC4.65□□□□□ -1.67
RXRBP28702 UFM1-201ENST00000239878 3138 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
RXRBP28702 SLC15A5-201ENST00000344941 2923 ntAPPRIS P1 TSL 5 BASIC4.65□□□□□ -1.67
RXRBP28702 AL359854.1-201ENST00000614203 1594 ntBASIC4.65□□□□□ -1.67
RXRBP28702 ZFYVE16-201ENST00000338008 6773 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
RXRBP28702 SYTL2-203ENST00000359152 4123 ntAPPRIS ALT1 TSL 1 (best) BASIC4.65□□□□□ -1.67
RXRBP28702 OR8D1-203ENST00000641897 8285 ntAPPRIS P1 BASIC4.64□□□□□ -1.67
RXRBP28702 POSTN-201ENST00000379742 3071 ntAPPRIS ALT2 TSL 1 (best) BASIC4.64□□□□□ -1.67
RXRBP28702 EBAG9-210ENST00000620557 2186 ntAPPRIS P1 TSL 3 BASIC4.64□□□□□ -1.67
RXRBP28702 AKAP11-201ENST00000025301 9920 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
RXRBP28702 AGBL2-201ENST00000357610 3295 ntAPPRIS ALT2 TSL 5 BASIC4.64□□□□□ -1.67
RXRBP28702 RNU6-48P-201ENST00000384161 107 ntBASIC4.64□□□□□ -1.67
RXRBP28702 Y_RNA.541-201ENST00000384640 113 ntBASIC4.64□□□□□ -1.67
RXRBP28702 RNA5SP494-201ENST00000410653 129 ntBASIC4.64□□□□□ -1.67
RXRBP28702 AC069257.1-202ENST00000425275 422 ntTSL 3 BASIC4.64□□□□□ -1.67
RXRBP28702 TMSB4XP3-201ENST00000445144 114 ntBASIC4.64□□□□□ -1.67
RXRBP28702 AL590399.6-201ENST00000446396 307 ntBASIC4.64□□□□□ -1.67
RXRBP28702 snoU13.3-201ENST00000459441 104 ntBASIC4.64□□□□□ -1.67
RXRBP28702 RNU6-1095P-201ENST00000516148 108 ntBASIC4.64□□□□□ -1.67
RXRBP28702 AC091544.4-201ENST00000555268 342 ntBASIC4.64□□□□□ -1.67
RXRBP28702 AC131274.4-201ENST00000577879 398 ntTSL 3 BASIC4.64□□□□□ -1.67
RXRBP28702 MIR548AC-201ENST00000585049 88 ntBASIC4.64□□□□□ -1.67
RXRBP28702 MACROD2-IT1-202ENST00000605675 575 ntTSL 5 BASIC4.64□□□□□ -1.67
RXRBP28702 CNOT1-201ENST00000317147 8471 ntAPPRIS P3 TSL 1 (best) BASIC4.64□□□□□ -1.67
RXRBP28702 ZNF808-201ENST00000359798 3600 ntAPPRIS P1 TSL 5 BASIC4.64□□□□□ -1.67
RXRBP28702 LRRTM4-201ENST00000409088 3616 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
RXRBP28702 CNOT10-206ENST00000454516 2760 ntTSL 2 BASIC4.64□□□□□ -1.67
RXRBP28702 KYNU-201ENST00000264170 15316 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
RXRBP28702 SKP1-209ENST00000522552 1683 ntAPPRIS ALT1 TSL 1 (best) BASIC4.64□□□□□ -1.67
RXRBP28702 PIGN-229ENST00000638936 4233 ntAPPRIS P1 TSL 5 BASIC4.64□□□□□ -1.67
RXRBP28702 KCNJ16-209ENST00000589377 3684 ntAPPRIS P1 TSL 5 BASIC4.64□□□□□ -1.67
RXRBP28702 Z73965.1-201ENST00000623412 2297 ntBASIC4.63□□□□□ -1.67
RXRBP28702 LCOR-204ENST00000371103 10342 ntAPPRIS P3 TSL 1 (best) BASIC4.63□□□□□ -1.67
RXRBP28702 RGS22-214ENST00000523287 4033 ntAPPRIS ALT2 TSL 2 BASIC4.63□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 118.3 ms