Protein–RNA interactions for Protein: P22090

RPS4Y1, 40S ribosomal protein S4, Y isoform 1, humanhuman

Known RBP Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPS4Y1P22090 RRN3P3-201ENST00000549207 578 ntBASIC1.01□□□□□ -2.25
RPS4Y1P22090 AL139193.1-201ENST00000554967 539 ntTSL 4 BASIC1.01□□□□□ -2.25
RPS4Y1P22090 AC084756.1-201ENST00000558237 606 ntTSL 5 BASIC1.01□□□□□ -2.25
RPS4Y1P22090 AC136618.2-201ENST00000575091 400 ntBASIC1.01□□□□□ -2.25
RPS4Y1P22090 DLGAP1-AS4-201ENST00000582054 757 ntTSL 5 BASIC1.01□□□□□ -2.25
RPS4Y1P22090 AC092574.1-201ENST00000609771 420 ntBASIC1.01□□□□□ -2.25
RPS4Y1P22090 CYLC1-202ENST00000621735 379 ntAPPRIS ALT2 TSL 3 BASIC1.01□□□□□ -2.25
RPS4Y1P22090 AC092656.1-203ENST00000624134 423 ntBASIC1.01□□□□□ -2.25
RPS4Y1P22090 AC090517.3-201ENST00000625170 141 ntBASIC1.01□□□□□ -2.25
RPS4Y1P22090 RNU6-529P-201ENST00000363383 104 ntBASIC1□□□□□ -2.25
RPS4Y1P22090 RNU6-944P-201ENST00000364023 107 ntBASIC1□□□□□ -2.25
RPS4Y1P22090 RNU5A-8P-201ENST00000364102 114 ntBASIC1□□□□□ -2.25
RPS4Y1P22090 SNORD14B-201ENST00000364533 90 ntBASIC1□□□□□ -2.25
RPS4Y1P22090 RNU6-487P-201ENST00000365430 104 ntBASIC1□□□□□ -2.25
RPS4Y1P22090 SNORA4.3-201ENST00000365564 137 ntBASIC1□□□□□ -2.25
RPS4Y1P22090 RNU6-939P-201ENST00000384634 107 ntBASIC1□□□□□ -2.25
RPS4Y1P22090 MIR301A-201ENST00000385261 86 ntBASIC1□□□□□ -2.25
RPS4Y1P22090 FCF1P10-201ENST00000407590 479 ntBASIC1□□□□□ -2.25
RPS4Y1P22090 MIR320C1-201ENST00000408566 88 ntBASIC1□□□□□ -2.25
RPS4Y1P22090 USP9YP33-201ENST00000412220 421 ntBASIC1□□□□□ -2.25
RPS4Y1P22090 AL109924.3-201ENST00000413324 393 ntTSL 2 BASIC1□□□□□ -2.25
RPS4Y1P22090 USP9YP18-201ENST00000425912 695 ntBASIC1□□□□□ -2.25
RPS4Y1P22090 LINC00459-201ENST00000431656 376 ntTSL 2 BASIC1□□□□□ -2.25
RPS4Y1P22090 MTCO3P5-201ENST00000433620 714 ntBASIC1□□□□□ -2.25
RPS4Y1P22090 AL138900.1-201ENST00000449345 399 ntTSL 3 BASIC1□□□□□ -2.25
RPS4Y1P22090 AL591504.1-201ENST00000450681 414 ntTSL 3 BASIC1□□□□□ -2.25
RPS4Y1P22090 MTND1P16-201ENST00000465177 898 ntBASIC1□□□□□ -2.25
RPS4Y1P22090 RPL30P12-201ENST00000474666 353 ntBASIC1□□□□□ -2.25
RPS4Y1P22090 AC093852.1-201ENST00000503587 266 ntBASIC1□□□□□ -2.25
RPS4Y1P22090 AC079395.1-201ENST00000510981 262 ntBASIC1□□□□□ -2.25
RPS4Y1P22090 RNVU1-2-201ENST00000516326 135 ntBASIC1□□□□□ -2.25
RPS4Y1P22090 RNU6-1315P-201ENST00000517187 99 ntBASIC1□□□□□ -2.25
RPS4Y1P22090 CD44-AS1-201ENST00000528869 587 ntTSL 4 BASIC1□□□□□ -2.25
RPS4Y1P22090 LINC01493-203ENST00000534756 509 ntTSL 3 BASIC1□□□□□ -2.25
RPS4Y1P22090 ZNF84-205ENST00000535439 647 ntTSL 5 BASIC1□□□□□ -2.25
RPS4Y1P22090 AC018630.3-201ENST00000542637 96 ntBASIC1□□□□□ -2.25
RPS4Y1P22090 LINC01195-201ENST00000570118 451 ntTSL 3 BASIC1□□□□□ -2.25
RPS4Y1P22090 BNIP3P30-201ENST00000601184 574 ntBASIC1□□□□□ -2.25
RPS4Y1P22090 AL359821.1-201ENST00000605519 182 ntBASIC1□□□□□ -2.25
RPS4Y1P22090 AC131235.4-201ENST00000609288 620 ntBASIC1□□□□□ -2.25
RPS4Y1P22090 PDCD6IPP1-201ENST00000615124 579 ntTSL 2 BASIC1□□□□□ -2.25
RPS4Y1P22090 AC018926.1-201ENST00000616335 435 ntBASIC1□□□□□ -2.25
RPS4Y1P22090 AC126544.2-201ENST00000625174 749 ntBASIC1□□□□□ -2.25
RPS4Y1P22090 MIR3529-201ENST00000637713 78 ntBASIC1□□□□□ -2.25
RPS4Y1P22090 MTND5P42-201ENST00000637720 498 ntBASIC1□□□□□ -2.25
RPS4Y1P22090 AC099654.8-201ENST00000637757 681 ntBASIC1□□□□□ -2.25
RPS4Y1P22090 OR4C11-202ENST00000641580 2737 ntAPPRIS P1 BASIC1□□□□□ -2.25
RPS4Y1P22090 STARD6-201ENST00000307844 663 ntAPPRIS P1 TSL 1 (best) BASIC0.99□□□□□ -2.25
RPS4Y1P22090 RNU6-858P-201ENST00000362436 107 ntBASIC0.99□□□□□ -2.25
RPS4Y1P22090 Y_RNA.40-201ENST00000362645 93 ntBASIC0.99□□□□□ -2.25
RPS4Y1P22090 RNU6-942P-201ENST00000363002 107 ntBASIC0.99□□□□□ -2.25
RPS4Y1P22090 Y_RNA.327-201ENST00000365201 102 ntBASIC0.99□□□□□ -2.25
RPS4Y1P22090 RNU6-622P-201ENST00000384272 103 ntBASIC0.99□□□□□ -2.25
RPS4Y1P22090 AC119751.3-201ENST00000399720 670 ntBASIC0.99□□□□□ -2.25
RPS4Y1P22090 RNU6-1025P-201ENST00000410629 104 ntBASIC0.99□□□□□ -2.25
RPS4Y1P22090 AC009411.1-202ENST00000412424 548 ntTSL 4 BASIC0.99□□□□□ -2.25
RPS4Y1P22090 OR6C66P-201ENST00000414917 930 ntBASIC0.99□□□□□ -2.25
RPS4Y1P22090 Z82205.1-201ENST00000428456 297 ntBASIC0.99□□□□□ -2.25
RPS4Y1P22090 AC104653.2-201ENST00000435407 416 ntTSL 3 BASIC0.99□□□□□ -2.25
RPS4Y1P22090 TRAPPC2P8-201ENST00000440676 396 ntBASIC0.99□□□□□ -2.25
RPS4Y1P22090 TRAPPC2P3-201ENST00000443200 321 ntBASIC0.99□□□□□ -2.25
RPS4Y1P22090 AL606517.1-201ENST00000446914 387 ntBASIC0.99□□□□□ -2.25
RPS4Y1P22090 SNORD97-201ENST00000459187 142 ntBASIC0.99□□□□□ -2.25
RPS4Y1P22090 MTND1P3-201ENST00000484956 952 ntBASIC0.99□□□□□ -2.25
RPS4Y1P22090 AC108729.1-201ENST00000487812 947 ntBASIC0.99□□□□□ -2.25
RPS4Y1P22090 AC097467.3-213ENST00000508191 726 ntTSL 3 BASIC0.99□□□□□ -2.25
RPS4Y1P22090 AC110767.1-201ENST00000508374 239 ntTSL 3 BASIC0.99□□□□□ -2.25
RPS4Y1P22090 RNU6-1053P-201ENST00000515930 101 ntBASIC0.99□□□□□ -2.25
RPS4Y1P22090 RN7SKP256-201ENST00000517201 314 ntBASIC0.99□□□□□ -2.25
RPS4Y1P22090 AP003034.1-201ENST00000534621 422 ntBASIC0.99□□□□□ -2.25
RPS4Y1P22090 AC019288.1-201ENST00000557918 224 ntBASIC0.99□□□□□ -2.25
RPS4Y1P22090 AC009093.3-203ENST00000565800 121 ntTSL 2 BASIC0.99□□□□□ -2.25
RPS4Y1P22090 AC002400.1-201ENST00000569310 726 ntBASIC0.99□□□□□ -2.25
RPS4Y1P22090 BNIP3P10-201ENST00000605360 577 ntBASIC0.99□□□□□ -2.25
RPS4Y1P22090 ST7-OT4_1.1-201ENST00000615322 200 ntBASIC0.99□□□□□ -2.25
RPS4Y1P22090 AC093648.1-201ENST00000623546 606 ntBASIC0.99□□□□□ -2.25
RPS4Y1P22090 EYS-205ENST00000393380 5450 ntTSL 1 (best) BASIC0.99□□□□□ -2.25
RPS4Y1P22090 HAUS6P2-201ENST00000433254 2404 ntBASIC0.98□□□□□ -2.25
RPS4Y1P22090 AC092125.1-201ENST00000562568 1995 ntBASIC0.98□□□□□ -2.25
RPS4Y1P22090 CBX3P1-201ENST00000325243 554 ntBASIC0.98□□□□□ -2.25
RPS4Y1P22090 SNORA62.1-201ENST00000364287 154 ntBASIC0.98□□□□□ -2.25
RPS4Y1P22090 OR51A4-201ENST00000380373 1002 ntAPPRIS P1 BASIC0.98□□□□□ -2.25
RPS4Y1P22090 SNORA75B-201ENST00000384053 137 ntBASIC0.98□□□□□ -2.25
RPS4Y1P22090 MIR513A1-201ENST00000385138 129 ntBASIC0.98□□□□□ -2.25
RPS4Y1P22090 RNU6-278P-201ENST00000390945 109 ntBASIC0.98□□□□□ -2.25
RPS4Y1P22090 MDM2-208ENST00000393410 732 ntTSL 1 (best) BASIC0.98□□□□□ -2.25
RPS4Y1P22090 MDM2-210ENST00000393413 657 ntTSL 1 (best) BASIC0.98□□□□□ -2.25
RPS4Y1P22090 RPS25P9-201ENST00000435591 252 ntBASIC0.98□□□□□ -2.25
RPS4Y1P22090 HMGN2P18-201ENST00000450680 270 ntBASIC0.98□□□□□ -2.25
RPS4Y1P22090 AC003071.1-201ENST00000451219 789 ntBASIC0.98□□□□□ -2.25
RPS4Y1P22090 RNU6-953P-201ENST00000459154 107 ntBASIC0.98□□□□□ -2.25
RPS4Y1P22090 AC078980.1-201ENST00000485384 262 ntTSL 2 BASIC0.98□□□□□ -2.25
RPS4Y1P22090 AP001025.1-201ENST00000486139 332 ntBASIC0.98□□□□□ -2.25
RPS4Y1P22090 AC097467.1-201ENST00000513660 370 ntTSL 5 BASIC0.98□□□□□ -2.25
RPS4Y1P22090 RNU6-914P-201ENST00000516749 109 ntBASIC0.98□□□□□ -2.25
RPS4Y1P22090 IFNG-AS1-201ENST00000536914 494 ntTSL 5 BASIC0.98□□□□□ -2.25
RPS4Y1P22090 AC087242.1-201ENST00000536931 572 ntTSL 4 BASIC0.98□□□□□ -2.25
RPS4Y1P22090 AC130415.1-201ENST00000547569 1010 ntTSL 4 BASIC0.98□□□□□ -2.25
RPS4Y1P22090 AL136038.2-201ENST00000553983 283 ntTSL 3 BASIC0.98□□□□□ -2.25
RPS4Y1P22090 RPL21P5-201ENST00000554662 472 ntBASIC0.98□□□□□ -2.25
Retrieved 100 of 98,524 protein–RNA pairs in 133.3 ms