Protein–RNA interactions for Protein: P21580

TNFAIP3, Tumor necrosis factor alpha-induced protein 3, humanhuman

Predictions only

Length 790 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP3P21580 AC097462.2-201ENST00000504623 481 ntBASIC2.85□□□□□ -1.95
TNFAIP3P21580 AC079340.1-201ENST00000504799 552 ntTSL 4 BASIC2.85□□□□□ -1.95
TNFAIP3P21580 AC021491.3-201ENST00000513378 156 ntTSL 3 BASIC2.85□□□□□ -1.95
TNFAIP3P21580 SNORA25.11-201ENST00000515935 105 ntBASIC2.85□□□□□ -1.95
TNFAIP3P21580 MTND4P7-201ENST00000523876 130 ntBASIC2.85□□□□□ -1.95
TNFAIP3P21580 TAS2R43-201ENST00000531678 1027 ntAPPRIS P1 BASIC2.85□□□□□ -1.95
TNFAIP3P21580 AC026470.3-201ENST00000563994 438 ntTSL 3 BASIC2.85□□□□□ -1.95
TNFAIP3P21580 MIR4446-201ENST00000578505 67 ntBASIC2.85□□□□□ -1.95
TNFAIP3P21580 MIR4635-201ENST00000583759 79 ntBASIC2.85□□□□□ -1.95
TNFAIP3P21580 AC009233.1-201ENST00000616477 371 ntBASIC2.85□□□□□ -1.95
TNFAIP3P21580 AC139792.3-201ENST00000623525 224 ntBASIC2.85□□□□□ -1.95
TNFAIP3P21580 CACNB4-238ENST00000636901 7706 ntTSL 5 BASIC2.84□□□□□ -1.95
TNFAIP3P21580 ARHGAP11A-207ENST00000565905 3318 ntTSL 2 BASIC2.84□□□□□ -1.95
TNFAIP3P21580 EFR3A-202ENST00000519656 5247 ntTSL 1 (best) BASIC2.84□□□□□ -1.95
TNFAIP3P21580 MIR186-201ENST00000384988 86 ntBASIC2.84□□□□□ -1.95
TNFAIP3P21580 MIR23A-201ENST00000385245 73 ntBASIC2.84□□□□□ -1.95
TNFAIP3P21580 RNA5SP210-201ENST00000391034 120 ntBASIC2.84□□□□□ -1.95
TNFAIP3P21580 AL591416.1-201ENST00000404015 867 ntBASIC2.84□□□□□ -1.95
TNFAIP3P21580 RPS4XP7-201ENST00000406274 780 ntBASIC2.84□□□□□ -1.95
TNFAIP3P21580 RNA5SP21-201ENST00000410917 96 ntBASIC2.84□□□□□ -1.95
TNFAIP3P21580 AC010731.2-201ENST00000415275 440 ntTSL 3 BASIC2.84□□□□□ -1.95
TNFAIP3P21580 AC007463.1-201ENST00000416534 734 ntTSL 3 BASIC2.84□□□□□ -1.95
TNFAIP3P21580 AL353193.1-201ENST00000421444 268 ntBASIC2.84□□□□□ -1.95
TNFAIP3P21580 DNAJC19P4-201ENST00000440115 345 ntBASIC2.84□□□□□ -1.95
TNFAIP3P21580 AC083798.1-201ENST00000472671 131 ntBASIC2.84□□□□□ -1.95
TNFAIP3P21580 LINC01487-202ENST00000490497 423 ntTSL 3 BASIC2.84□□□□□ -1.95
TNFAIP3P21580 MTND2P33-201ENST00000506452 1031 ntBASIC2.84□□□□□ -1.95
TNFAIP3P21580 LINC02501-201ENST00000510420 426 ntTSL 2 BASIC2.84□□□□□ -1.95
TNFAIP3P21580 RNU1-104P-201ENST00000517280 175 ntBASIC2.84□□□□□ -1.95
TNFAIP3P21580 MDM2-221ENST00000517852 393 ntTSL 1 (best) BASIC2.84□□□□□ -1.95
TNFAIP3P21580 COPS8P3-201ENST00000526024 482 ntBASIC2.84□□□□□ -1.95
TNFAIP3P21580 AC022880.1-201ENST00000534017 973 ntBASIC2.84□□□□□ -1.95
TNFAIP3P21580 AL139193.1-201ENST00000554967 539 ntTSL 4 BASIC2.84□□□□□ -1.95
TNFAIP3P21580 AC113137.1-201ENST00000591869 558 ntTSL 4 BASIC2.84□□□□□ -1.95
TNFAIP3P21580 VN1R107P-201ENST00000601784 209 ntBASIC2.84□□□□□ -1.95
TNFAIP3P21580 RPL12P50-201ENST00000603116 116 ntBASIC2.84□□□□□ -1.95
TNFAIP3P21580 ZNRD1-AS1_2.5-201ENST00000614729 76 ntBASIC2.84□□□□□ -1.95
TNFAIP3P21580 AC098679.4-201ENST00000624241 654 ntBASIC2.84□□□□□ -1.95
TNFAIP3P21580 AC124864.2-201ENST00000624736 186 ntBASIC2.84□□□□□ -1.95
TNFAIP3P21580 ZRANB2-AS2-222ENST00000625045 1014 ntTSL 5 BASIC2.84□□□□□ -1.95
TNFAIP3P21580 OR5AK4P-201ENST00000635912 903 ntBASIC2.84□□□□□ -1.95
TNFAIP3P21580 DLD-214ENST00000639772 421 ntTSL 5 BASIC2.84□□□□□ -1.95
TNFAIP3P21580 LINC01684-201ENST00000415182 2176 ntTSL 1 (best) BASIC2.84□□□□□ -1.96
TNFAIP3P21580 CENPE-201ENST00000265148 8612 ntAPPRIS P1 TSL 2 BASIC2.83□□□□□ -1.96
TNFAIP3P21580 Z82209.1-201ENST00000422141 2135 ntBASIC2.83□□□□□ -1.96
TNFAIP3P21580 SNORD56.1-201ENST00000362913 68 ntBASIC2.83□□□□□ -1.96
TNFAIP3P21580 RNU1-72P-201ENST00000362976 153 ntBASIC2.83□□□□□ -1.96
TNFAIP3P21580 RNU6-527P-201ENST00000363425 104 ntBASIC2.83□□□□□ -1.96
TNFAIP3P21580 RNU1-52P-201ENST00000384190 164 ntBASIC2.83□□□□□ -1.96
TNFAIP3P21580 AL592435.1-201ENST00000416401 469 ntTSL 3 BASIC2.83□□□□□ -1.96
TNFAIP3P21580 MTCYBP8-201ENST00000422855 651 ntBASIC2.83□□□□□ -1.96
TNFAIP3P21580 AC093423.2-201ENST00000429074 437 ntTSL 3 BASIC2.83□□□□□ -1.96
TNFAIP3P21580 AL606489.2-201ENST00000433886 234 ntBASIC2.83□□□□□ -1.96
TNFAIP3P21580 AC124916.1-201ENST00000444020 547 ntBASIC2.83□□□□□ -1.96
TNFAIP3P21580 RPL39P40-201ENST00000445481 146 ntBASIC2.83□□□□□ -1.96
TNFAIP3P21580 GAS5-221ENST00000450589 632 ntTSL 1 (best) BASIC2.83□□□□□ -1.96
TNFAIP3P21580 RN7SL499P-201ENST00000481141 276 ntBASIC2.83□□□□□ -1.96
TNFAIP3P21580 VCAN-AS1-202ENST00000513899 453 ntTSL 3 BASIC2.83□□□□□ -1.96
TNFAIP3P21580 RNU6-377P-201ENST00000515965 102 ntBASIC2.83□□□□□ -1.96
TNFAIP3P21580 RNU2-53P-201ENST00000516257 147 ntBASIC2.83□□□□□ -1.96
TNFAIP3P21580 SNORA48.11-201ENST00000517015 89 ntBASIC2.83□□□□□ -1.96
TNFAIP3P21580 SNORA25.17-201ENST00000517184 124 ntBASIC2.83□□□□□ -1.96
TNFAIP3P21580 AP001893.2-201ENST00000526949 202 ntBASIC2.83□□□□□ -1.96
TNFAIP3P21580 CYCSP27-201ENST00000527643 293 ntBASIC2.83□□□□□ -1.96
TNFAIP3P21580 AC104383.1-201ENST00000530297 370 ntBASIC2.83□□□□□ -1.96
TNFAIP3P21580 AL359237.1-201ENST00000554305 826 ntTSL 5 BASIC2.83□□□□□ -1.96
TNFAIP3P21580 AC087749.2-201ENST00000583910 352 ntTSL 5 BASIC2.83□□□□□ -1.96
TNFAIP3P21580 AC090227.2-201ENST00000591105 340 ntTSL 5 BASIC2.83□□□□□ -1.96
TNFAIP3P21580 RPL30P11-203ENST00000598995 310 ntBASIC2.83□□□□□ -1.96
TNFAIP3P21580 AC146944.4-201ENST00000602697 718 ntBASIC2.83□□□□□ -1.96
TNFAIP3P21580 AL355297.2-201ENST00000604792 129 ntBASIC2.83□□□□□ -1.96
TNFAIP3P21580 TMEM154-204ENST00000613578 486 ntAPPRIS ALT2 TSL 5 BASIC2.83□□□□□ -1.96
TNFAIP3P21580 AC023490.1-201ENST00000614584 375 ntTSL 2 BASIC2.83□□□□□ -1.96
TNFAIP3P21580 uc_338.34-201ENST00000617467 174 ntBASIC2.83□□□□□ -1.96
TNFAIP3P21580 AL158209.2-201ENST00000619266 216 ntBASIC2.83□□□□□ -1.96
TNFAIP3P21580 AC011718.1-201ENST00000622906 375 ntTSL 1 (best) BASIC2.83□□□□□ -1.96
TNFAIP3P21580 SACS-201ENST00000382292 15324 ntAPPRIS P1 TSL 5 BASIC2.83□□□□□ -1.96
TNFAIP3P21580 HIF1A-201ENST00000323441 3555 ntTSL 1 (best) BASIC2.83□□□□□ -1.96
TNFAIP3P21580 RNU6-655P-201ENST00000362858 107 ntBASIC2.82□□□□□ -1.96
TNFAIP3P21580 RNU6-1210P-201ENST00000363775 107 ntBASIC2.82□□□□□ -1.96
TNFAIP3P21580 TRAV34-201ENST00000390461 349 ntAPPRIS P1 BASIC2.82□□□□□ -1.96
TNFAIP3P21580 AL606923.1-201ENST00000406616 190 ntBASIC2.82□□□□□ -1.96
TNFAIP3P21580 RNU6-1245P-201ENST00000411130 106 ntBASIC2.82□□□□□ -1.96
TNFAIP3P21580 AL589987.2-201ENST00000417426 582 ntTSL 2 BASIC2.82□□□□□ -1.96
TNFAIP3P21580 AL137856.1-202ENST00000418238 422 ntTSL 3 BASIC2.82□□□□□ -1.96
TNFAIP3P21580 USP9YP20-201ENST00000419224 558 ntBASIC2.82□□□□□ -1.96
TNFAIP3P21580 PSPHP1-201ENST00000450062 261 ntBASIC2.82□□□□□ -1.96
TNFAIP3P21580 AL354824.2-201ENST00000458004 446 ntTSL 3 BASIC2.82□□□□□ -1.96
TNFAIP3P21580 SRRM1P2-201ENST00000464531 1192 ntBASIC2.82□□□□□ -1.96
TNFAIP3P21580 AC140059.1-201ENST00000489238 361 ntBASIC2.82□□□□□ -1.96
TNFAIP3P21580 AC008539.1-201ENST00000507653 482 ntTSL 3 BASIC2.82□□□□□ -1.96
TNFAIP3P21580 AC069133.1-201ENST00000522857 566 ntTSL 4 BASIC2.82□□□□□ -1.96
TNFAIP3P21580 DEUP1-203ENST00000527307 767 ntTSL 3 BASIC2.82□□□□□ -1.96
TNFAIP3P21580 AC023442.3-201ENST00000532199 495 ntTSL 2 BASIC2.82□□□□□ -1.96
TNFAIP3P21580 MDM2-233ENST00000545204 398 ntTSL 5 BASIC2.82□□□□□ -1.96
TNFAIP3P21580 AL512310.1-201ENST00000548639 172 ntBASIC2.82□□□□□ -1.96
TNFAIP3P21580 AC245505.1-201ENST00000556398 224 ntBASIC2.82□□□□□ -1.96
TNFAIP3P21580 AC007598.1-202ENST00000561528 435 ntTSL 3 BASIC2.82□□□□□ -1.96
TNFAIP3P21580 AC007631.1-201ENST00000578545 189 ntTSL 3 BASIC2.82□□□□□ -1.96
TNFAIP3P21580 AL713866.2-201ENST00000603579 219 ntBASIC2.82□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 115.8 ms