Protein–RNA interactions for Protein: P20849

COL9A1, Collagen alpha-1(IX) chain, humanhuman

Predictions only

Length 921 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1P20849 AC093578.1-201ENST00000415219 368 ntBASIC5.11□□□□□ -1.59
COL9A1P20849 AL591419.1-201ENST00000427423 339 ntBASIC5.11□□□□□ -1.59
COL9A1P20849 AC004386.2-201ENST00000441858 148 ntBASIC5.11□□□□□ -1.59
COL9A1P20849 RPS17P2-201ENST00000461663 408 ntBASIC5.11□□□□□ -1.59
COL9A1P20849 RPL21P10-201ENST00000463521 490 ntBASIC5.11□□□□□ -1.59
COL9A1P20849 RN7SL303P-201ENST00000469773 251 ntBASIC5.11□□□□□ -1.59
COL9A1P20849 PPP1R11P1-201ENST00000486095 376 ntBASIC5.11□□□□□ -1.59
COL9A1P20849 AC114741.1-201ENST00000504357 464 ntTSL 2 BASIC5.11□□□□□ -1.59
COL9A1P20849 RNA5SP315-201ENST00000516340 116 ntBASIC5.11□□□□□ -1.59
COL9A1P20849 RNU1-117P-201ENST00000517041 158 ntBASIC5.11□□□□□ -1.59
COL9A1P20849 RNA5SP312-201ENST00000517068 116 ntBASIC5.11□□□□□ -1.59
COL9A1P20849 AC136475.4-201ENST00000534271 280 ntTSL 5 BASIC5.11□□□□□ -1.59
COL9A1P20849 AC009137.1-201ENST00000562790 260 ntTSL 3 BASIC5.11□□□□□ -1.59
COL9A1P20849 AC243829.5-201ENST00000578447 247 ntTSL 5 BASIC5.11□□□□□ -1.59
COL9A1P20849 AC018692.3-201ENST00000623929 123 ntBASIC5.11□□□□□ -1.59
COL9A1P20849 ZNF546-201ENST00000347077 7987 ntAPPRIS P3 TSL 1 (best) BASIC5.11□□□□□ -1.59
COL9A1P20849 MYO5A-201ENST00000356338 11971 ntAPPRIS ALT1 TSL 1 (best) BASIC5.11□□□□□ -1.59
COL9A1P20849 TLR5-205ENST00000540964 4088 ntAPPRIS P1 TSL 5 BASIC5.11□□□□□ -1.59
COL9A1P20849 CNGB3-201ENST00000320005 4347 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
COL9A1P20849 ZFP14-201ENST00000270001 7489 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
COL9A1P20849 ZNF137P-201ENST00000456718 1920 ntBASIC5.11□□□□□ -1.59
COL9A1P20849 OXR1-207ENST00000497705 2007 ntTSL 2 BASIC5.11□□□□□ -1.59
COL9A1P20849 ZNF780A-205ENST00000594395 2044 ntAPPRIS ALT2 TSL 2 BASIC5.11□□□□□ -1.59
COL9A1P20849 EXOC1-202ENST00000349598 3248 ntAPPRIS ALT1 TSL 2 BASIC5.1□□□□□ -1.59
COL9A1P20849 LDAH-211ENST00000541941 3807 ntTSL 2 BASIC5.1□□□□□ -1.59
COL9A1P20849 ZNF525-202ENST00000474037 3890 ntAPPRIS P1 TSL 5 BASIC5.1□□□□□ -1.59
COL9A1P20849 RNU1-75P-201ENST00000347264 129 ntBASIC5.1□□□□□ -1.59
COL9A1P20849 RNU6-884P-201ENST00000363889 107 ntBASIC5.1□□□□□ -1.59
COL9A1P20849 MRPL50-201ENST00000374865 3332 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
COL9A1P20849 RNU6-484P-201ENST00000384016 107 ntBASIC5.1□□□□□ -1.59
COL9A1P20849 RNU6-1197P-201ENST00000391183 107 ntBASIC5.1□□□□□ -1.59
COL9A1P20849 BCLAF1-202ENST00000392348 2610 ntTSL 5 BASIC5.1□□□□□ -1.59
COL9A1P20849 NFKBIZ-203ENST00000394054 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC5.1□□□□□ -1.59
COL9A1P20849 AFTPH-204ENST00000409933 2811 ntAPPRIS ALT1 TSL 1 (best) BASIC5.1□□□□□ -1.59
COL9A1P20849 AC092941.1-201ENST00000415940 427 ntTSL 5 BASIC5.1□□□□□ -1.59
COL9A1P20849 EIF4HP2-201ENST00000424380 563 ntBASIC5.1□□□□□ -1.59
COL9A1P20849 HMGN2P32-201ENST00000444648 269 ntBASIC5.1□□□□□ -1.59
COL9A1P20849 AL354714.3-201ENST00000447284 493 ntBASIC5.1□□□□□ -1.59
COL9A1P20849 TSPY5P-202ENST00000456541 142 ntTSL 3 BASIC5.1□□□□□ -1.59
COL9A1P20849 HHLA2-209ENST00000489514 2406 ntAPPRIS P3 TSL 1 (best) BASIC5.1□□□□□ -1.59
COL9A1P20849 snoMBII-202.2-201ENST00000517263 86 ntBASIC5.1□□□□□ -1.59
COL9A1P20849 AC083837.1-201ENST00000565297 2994 ntBASIC5.1□□□□□ -1.59
COL9A1P20849 AC005856.1-201ENST00000585921 286 ntTSL 3 BASIC5.1□□□□□ -1.59
COL9A1P20849 SNRPGP15-201ENST00000600149 222 ntBASIC5.1□□□□□ -1.59
COL9A1P20849 MIR6133-201ENST00000617057 108 ntBASIC5.1□□□□□ -1.59
COL9A1P20849 RAB3GAP1-207ENST00000539493 3161 ntTSL 5 BASIC5.1□□□□□ -1.59
COL9A1P20849 LINC02397-201ENST00000504409 10626 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
COL9A1P20849 ERC2-201ENST00000288221 6138 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
COL9A1P20849 Y_RNA.85-201ENST00000363014 111 ntBASIC5.09□□□□□ -1.59
COL9A1P20849 Y_RNA.163-201ENST00000363702 113 ntBASIC5.09□□□□□ -1.59
COL9A1P20849 RNU6-309P-201ENST00000364573 106 ntBASIC5.09□□□□□ -1.59
COL9A1P20849 RNA5-8SP4-201ENST00000365096 150 ntBASIC5.09□□□□□ -1.59
COL9A1P20849 SNORA51.5-201ENST00000384126 131 ntBASIC5.09□□□□□ -1.59
COL9A1P20849 RNU6-1113P-201ENST00000384348 107 ntBASIC5.09□□□□□ -1.59
COL9A1P20849 PTMAP5-201ENST00000393073 333 ntBASIC5.09□□□□□ -1.59
COL9A1P20849 RNU6ATAC-201ENST00000408749 126 ntBASIC5.09□□□□□ -1.59
COL9A1P20849 AC004866.1-201ENST00000411748 78 ntBASIC5.09□□□□□ -1.59
COL9A1P20849 AC126124.2-201ENST00000413542 321 ntBASIC5.09□□□□□ -1.59
COL9A1P20849 FO680682.1-201ENST00000421261 345 ntTSL 3 BASIC5.09□□□□□ -1.59
COL9A1P20849 LINC00375-201ENST00000433074 601 ntTSL 5 BASIC5.09□□□□□ -1.59
COL9A1P20849 ABCC13-202ENST00000463099 3842 ntBASIC5.09□□□□□ -1.59
COL9A1P20849 RNU6-970P-201ENST00000516312 107 ntBASIC5.09□□□□□ -1.59
COL9A1P20849 RNU6-1299P-201ENST00000516316 100 ntBASIC5.09□□□□□ -1.59
COL9A1P20849 RNU7-116P-201ENST00000516940 62 ntBASIC5.09□□□□□ -1.59
COL9A1P20849 AP003465.1-201ENST00000520575 382 ntTSL 2 BASIC5.09□□□□□ -1.59
COL9A1P20849 AC099793.1-201ENST00000567538 285 ntTSL 3 BASIC5.09□□□□□ -1.59
COL9A1P20849 MIR5006-201ENST00000583027 110 ntBASIC5.09□□□□□ -1.59
COL9A1P20849 RN7SL435P-201ENST00000584418 282 ntBASIC5.09□□□□□ -1.59
COL9A1P20849 AL034555.1-201ENST00000604816 211 ntBASIC5.09□□□□□ -1.59
COL9A1P20849 PCGEM1.1-201ENST00000613431 131 ntBASIC5.09□□□□□ -1.59
COL9A1P20849 AC015726.2-201ENST00000620112 122 ntBASIC5.09□□□□□ -1.59
COL9A1P20849 AC000095.2-202ENST00000637415 154 ntBASIC5.09□□□□□ -1.59
COL9A1P20849 TEK-205ENST00000615002 4666 ntTSL 5 BASIC5.09□□□□□ -1.59
COL9A1P20849 WDR64-201ENST00000366552 4371 ntAPPRIS P1 TSL 5 BASIC5.09□□□□□ -1.59
COL9A1P20849 STAG2-203ENST00000371145 4393 ntAPPRIS ALT1 TSL 1 (best) BASIC5.09□□□□□ -1.59
COL9A1P20849 CUBN-202ENST00000377833 11949 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
COL9A1P20849 THOC1-221ENST00000631280 2011 ntTSL 5 BASIC5.09□□□□□ -1.6
COL9A1P20849 RSF1-204ENST00000480887 5318 ntAPPRIS ALT2 TSL 1 (best) BASIC5.09□□□□□ -1.6
COL9A1P20849 SMC2-203ENST00000374793 5909 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
COL9A1P20849 LINC00624-202ENST00000621316 3372 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
COL9A1P20849 ARHGAP42P3-201ENST00000443989 2508 ntBASIC5.08□□□□□ -1.6
COL9A1P20849 ZNF658-201ENST00000612867 4160 ntAPPRIS P1 TSL 2 BASIC5.08□□□□□ -1.6
COL9A1P20849 MS4A14-208ENST00000531783 2910 ntAPPRIS ALT2 TSL 5 BASIC5.08□□□□□ -1.6
COL9A1P20849 LINC01152-201ENST00000472655 3578 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
COL9A1P20849 BRCA1-203ENST00000357654 7094 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
COL9A1P20849 MUM1L1-202ENST00000357175 4173 ntAPPRIS P1 TSL 2 BASIC5.08□□□□□ -1.6
COL9A1P20849 KLHL13-203ENST00000371878 3234 ntTSL 2 BASIC5.08□□□□□ -1.6
COL9A1P20849 RNA5SP173-201ENST00000364857 136 ntBASIC5.08□□□□□ -1.6
COL9A1P20849 SNORA2.3-201ENST00000383920 135 ntBASIC5.08□□□□□ -1.6
COL9A1P20849 RNU6-1323P-201ENST00000384025 107 ntBASIC5.08□□□□□ -1.6
COL9A1P20849 SNORA77-201ENST00000408716 125 ntBASIC5.08□□□□□ -1.6
COL9A1P20849 RN7SKP17-201ENST00000411242 351 ntBASIC5.08□□□□□ -1.6
COL9A1P20849 AC027124.2-201ENST00000428249 105 ntBASIC5.08□□□□□ -1.6
COL9A1P20849 AC099670.2-201ENST00000435130 321 ntBASIC5.08□□□□□ -1.6
COL9A1P20849 AC090515.1-201ENST00000465295 476 ntBASIC5.08□□□□□ -1.6
COL9A1P20849 RNU5F-2P-201ENST00000516066 82 ntBASIC5.08□□□□□ -1.6
COL9A1P20849 RNA5SP153-201ENST00000516498 76 ntBASIC5.08□□□□□ -1.6
COL9A1P20849 IGKV2D-19-201ENST00000523346 262 ntBASIC5.08□□□□□ -1.6
COL9A1P20849 EIF4A1P12-201ENST00000551910 141 ntBASIC5.08□□□□□ -1.6
COL9A1P20849 AC084398.2-201ENST00000551918 564 ntTSL 4 BASIC5.08□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 102.2 ms