Protein–RNA interactions for Protein: P20700

LMNB1, Lamin-B1, humanhuman

Predictions only

Length 586 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1P20700 AC009318.2-201ENST00000610917 651 ntBASIC4.48□□□□□ -1.69
LMNB1P20700 AC004852.3-201ENST00000614131 326 ntBASIC4.48□□□□□ -1.69
LMNB1P20700 AL138825.1-201ENST00000618587 192 ntBASIC4.48□□□□□ -1.69
LMNB1P20700 SMAD5-AS1_1.1-201ENST00000619886 266 ntBASIC4.48□□□□□ -1.69
LMNB1P20700 AC103858.2-201ENST00000621471 543 ntBASIC4.48□□□□□ -1.69
LMNB1P20700 MIR4727-201ENST00000622232 55 ntBASIC4.48□□□□□ -1.69
LMNB1P20700 EPC1-203ENST00000375110 3909 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
LMNB1P20700 SEMA3D-201ENST00000284136 6265 ntAPPRIS P1 TSL 5 BASIC4.48□□□□□ -1.69
LMNB1P20700 TBC1D31-214ENST00000522420 3167 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
LMNB1P20700 AC007785.2-201ENST00000598627 1916 ntBASIC4.48□□□□□ -1.69
LMNB1P20700 TDRD1-202ENST00000369280 4062 ntAPPRIS ALT2 TSL 5 BASIC4.48□□□□□ -1.69
LMNB1P20700 LINC00907-209ENST00000593234 3376 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
LMNB1P20700 RGS22-214ENST00000523287 4033 ntAPPRIS ALT2 TSL 2 BASIC4.48□□□□□ -1.69
LMNB1P20700 PREPL-206ENST00000409936 5212 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
LMNB1P20700 SLC16A10-201ENST00000368850 10051 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
LMNB1P20700 Y_RNA.152-201ENST00000363578 100 ntBASIC4.47□□□□□ -1.69
LMNB1P20700 SNORA7.2-201ENST00000364446 145 ntBASIC4.47□□□□□ -1.69
LMNB1P20700 RNA5SP494-201ENST00000410653 129 ntBASIC4.47□□□□□ -1.69
LMNB1P20700 RN7SKP284-201ENST00000411002 343 ntBASIC4.47□□□□□ -1.69
LMNB1P20700 LINC00448-201ENST00000438352 402 ntTSL 3 BASIC4.47□□□□□ -1.69
LMNB1P20700 SNORA71B-202ENST00000439232 272 ntBASIC4.47□□□□□ -1.69
LMNB1P20700 AL078601.1-201ENST00000444542 271 ntBASIC4.47□□□□□ -1.69
LMNB1P20700 GAS5-221ENST00000450589 632 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
LMNB1P20700 MTCO3P8-201ENST00000453691 755 ntBASIC4.47□□□□□ -1.69
LMNB1P20700 CEACAMP4-201ENST00000457676 421 ntBASIC4.47□□□□□ -1.69
LMNB1P20700 AC092919.1-201ENST00000467896 229 ntTSL 2 BASIC4.47□□□□□ -1.69
LMNB1P20700 AC008243.1-201ENST00000504955 389 ntTSL 3 BASIC4.47□□□□□ -1.69
LMNB1P20700 AC020703.1-201ENST00000505051 521 ntTSL 3 BASIC4.47□□□□□ -1.69
LMNB1P20700 AC107222.1-201ENST00000510899 637 ntBASIC4.47□□□□□ -1.69
LMNB1P20700 PHBP14-201ENST00000512887 367 ntBASIC4.47□□□□□ -1.69
LMNB1P20700 RNU6-397P-201ENST00000516226 104 ntBASIC4.47□□□□□ -1.69
LMNB1P20700 RNU6-612P-201ENST00000516909 102 ntBASIC4.47□□□□□ -1.69
LMNB1P20700 IGKV2-38-201ENST00000517443 247 ntBASIC4.47□□□□□ -1.69
LMNB1P20700 AC023157.2-201ENST00000540596 141 ntBASIC4.47□□□□□ -1.69
LMNB1P20700 MTND4LP5-201ENST00000605152 292 ntBASIC4.47□□□□□ -1.69
LMNB1P20700 AL591424.2-201ENST00000617023 128 ntBASIC4.47□□□□□ -1.69
LMNB1P20700 Xist_exon1.1-201ENST00000618930 85 ntBASIC4.47□□□□□ -1.69
LMNB1P20700 ANKRD28-215ENST00000624145 6383 ntTSL 2 BASIC4.47□□□□□ -1.69
LMNB1P20700 LIPI-203ENST00000536861 1529 ntAPPRIS ALT2 TSL 1 (best) BASIC4.46□□□□□ -1.69
LMNB1P20700 MGA-201ENST00000219905 12042 ntAPPRIS P4 TSL 5 BASIC4.46□□□□□ -1.7
LMNB1P20700 MFN1-201ENST00000263969 2754 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
LMNB1P20700 RTKN2-201ENST00000315289 2383 ntTSL 2 BASIC4.46□□□□□ -1.7
LMNB1P20700 PIGN-210ENST00000588571 1960 ntTSL 5 BASIC4.46□□□□□ -1.7
LMNB1P20700 RNU4-35P-201ENST00000362588 141 ntBASIC4.46□□□□□ -1.7
LMNB1P20700 TRAJ34-201ENST00000390503 58 ntAPPRIS P1 BASIC4.46□□□□□ -1.7
LMNB1P20700 RNU2-68P-201ENST00000410878 191 ntBASIC4.46□□□□□ -1.7
LMNB1P20700 RNA5SP306-201ENST00000411087 107 ntBASIC4.46□□□□□ -1.7
LMNB1P20700 AL117337.1-201ENST00000412789 444 ntTSL 3 BASIC4.46□□□□□ -1.7
LMNB1P20700 AC012370.1-201ENST00000419244 530 ntTSL 3 BASIC4.46□□□□□ -1.7
LMNB1P20700 AC009237.8-201ENST00000445492 379 ntBASIC4.46□□□□□ -1.7
LMNB1P20700 U8.21-201ENST00000459536 136 ntBASIC4.46□□□□□ -1.7
LMNB1P20700 S100A11P2-201ENST00000467589 312 ntBASIC4.46□□□□□ -1.7
LMNB1P20700 RNU6-408P-201ENST00000515910 100 ntBASIC4.46□□□□□ -1.7
LMNB1P20700 SNORA70.18-201ENST00000516696 98 ntBASIC4.46□□□□□ -1.7
LMNB1P20700 AC100807.1-201ENST00000517640 552 ntTSL 5 BASIC4.46□□□□□ -1.7
LMNB1P20700 AC109329.1-201ENST00000518744 317 ntBASIC4.46□□□□□ -1.7
LMNB1P20700 AF099810.1-201ENST00000554219 525 ntTSL 3 BASIC4.46□□□□□ -1.7
LMNB1P20700 AC005476.1-201ENST00000554427 397 ntBASIC4.46□□□□□ -1.7
LMNB1P20700 ZNF192P1-203ENST00000565888 810 ntBASIC4.46□□□□□ -1.7
LMNB1P20700 AC007493.1-202ENST00000567899 517 ntTSL 2 BASIC4.46□□□□□ -1.7
LMNB1P20700 AC005357.1-201ENST00000588399 301 ntBASIC4.46□□□□□ -1.7
LMNB1P20700 AC078899.3-201ENST00000599065 212 ntBASIC4.46□□□□□ -1.7
LMNB1P20700 AC006557.5-201ENST00000603126 811 ntBASIC4.46□□□□□ -1.7
LMNB1P20700 AL645944.1-201ENST00000603857 493 ntBASIC4.46□□□□□ -1.7
LMNB1P20700 AC006386.2-201ENST00000624491 75 ntBASIC4.46□□□□□ -1.7
LMNB1P20700 AC012005.1-201ENST00000624575 75 ntBASIC4.46□□□□□ -1.7
LMNB1P20700 USP26-201ENST00000370832 3642 ntAPPRIS P1 BASIC4.46□□□□□ -1.7
LMNB1P20700 FAM169A-201ENST00000389156 5990 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
LMNB1P20700 PKN2-AS1-202ENST00000458097 3542 ntTSL 2 BASIC4.46□□□□□ -1.7
LMNB1P20700 PROS1-203ENST00000407433 3335 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
LMNB1P20700 MGA-202ENST00000545763 11413 ntAPPRIS ALT2 TSL 5 BASIC4.46□□□□□ -1.7
LMNB1P20700 EFR3A-208ENST00000637848 2547 ntTSL 5 BASIC4.46□□□□□ -1.7
LMNB1P20700 AL359693.1-201ENST00000614959 2407 ntBASIC4.46□□□□□ -1.7
LMNB1P20700 AC008568.2-201ENST00000623862 2313 ntBASIC4.45□□□□□ -1.7
LMNB1P20700 LRIF1-203ENST00000494675 1912 ntAPPRIS ALT2 TSL 2 BASIC4.45□□□□□ -1.7
LMNB1P20700 FGD4-211ENST00000531134 2924 ntTSL 2 BASIC4.45□□□□□ -1.7
LMNB1P20700 PCDH11X-206ENST00000373097 9146 ntAPPRIS ALT2 TSL 1 (best) BASIC4.45□□□□□ -1.7
LMNB1P20700 Y_RNA.64-201ENST00000362845 102 ntBASIC4.45□□□□□ -1.7
LMNB1P20700 RNA5SP374-201ENST00000362939 125 ntBASIC4.45□□□□□ -1.7
LMNB1P20700 RNU6-336P-201ENST00000364891 107 ntBASIC4.45□□□□□ -1.7
LMNB1P20700 Y_RNA.447-201ENST00000384184 113 ntBASIC4.45□□□□□ -1.7
LMNB1P20700 Y_RNA.461-201ENST00000384263 103 ntBASIC4.45□□□□□ -1.7
LMNB1P20700 Y_RNA.483-201ENST00000384380 101 ntBASIC4.45□□□□□ -1.7
LMNB1P20700 SNORA51.11-201ENST00000384442 131 ntBASIC4.45□□□□□ -1.7
LMNB1P20700 RNA5SP424-201ENST00000390988 115 ntBASIC4.45□□□□□ -1.7
LMNB1P20700 COTL1P1-201ENST00000422309 375 ntBASIC4.45□□□□□ -1.7
LMNB1P20700 AC098614.2-201ENST00000426040 255 ntBASIC4.45□□□□□ -1.7
LMNB1P20700 ARL5AP4-201ENST00000430731 512 ntBASIC4.45□□□□□ -1.7
LMNB1P20700 Z82210.1-201ENST00000440037 231 ntBASIC4.45□□□□□ -1.7
LMNB1P20700 ENSA-210ENST00000503241 574 ntTSL 3 BASIC4.45□□□□□ -1.7
LMNB1P20700 LINC02494-201ENST00000509824 427 ntTSL 3 BASIC4.45□□□□□ -1.7
LMNB1P20700 SNORA25.11-201ENST00000515935 105 ntBASIC4.45□□□□□ -1.7
LMNB1P20700 AC018554.1-202ENST00000565133 444 ntTSL 3 BASIC4.45□□□□□ -1.7
LMNB1P20700 AC011373.1-201ENST00000607270 237 ntBASIC4.45□□□□□ -1.7
LMNB1P20700 AP000553.6-201ENST00000641242 118 ntBASIC4.45□□□□□ -1.7
LMNB1P20700 PPP1R9A-208ENST00000456331 10090 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
LMNB1P20700 CEP44-201ENST00000296519 4173 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
LMNB1P20700 SLC30A6-203ENST00000379343 2354 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
LMNB1P20700 MYCBP2-211ENST00000544440 14664 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
LMNB1P20700 FAM214A-204ENST00000546305 3697 ntTSL 2 BASIC4.44□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 109.5 ms