Protein–RNA interactions for Protein: P18847

ATF3, Cyclic AMP-dependent transcription factor ATF-3, humanhuman

Predictions only

Length 181 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATF3P18847 AL139397.1-201ENST00000430456 644 ntTSL 2 BASIC3.63□□□□□ -1.83
ATF3P18847 AL035258.1-201ENST00000439450 439 ntTSL 3 BASIC3.63□□□□□ -1.83
ATF3P18847 AC125238.1-201ENST00000448842 249 ntBASIC3.63□□□□□ -1.83
ATF3P18847 RNU6-1208P-201ENST00000459588 107 ntBASIC3.63□□□□□ -1.83
ATF3P18847 AC003982.1-202ENST00000469928 248 ntBASIC3.63□□□□□ -1.83
ATF3P18847 RPS29P25-201ENST00000481709 171 ntBASIC3.63□□□□□ -1.83
ATF3P18847 SRIP1-201ENST00000489235 288 ntBASIC3.63□□□□□ -1.83
ATF3P18847 LINC02061-201ENST00000514225 335 ntTSL 3 BASIC3.63□□□□□ -1.83
ATF3P18847 RN7SKP24-201ENST00000515888 284 ntBASIC3.63□□□□□ -1.83
ATF3P18847 AP004607.1-201ENST00000524456 203 ntBASIC3.63□□□□□ -1.83
ATF3P18847 AC078814.3-201ENST00000553036 491 ntBASIC3.63□□□□□ -1.83
ATF3P18847 AL118558.2-201ENST00000556294 238 ntBASIC3.63□□□□□ -1.83
ATF3P18847 AC008739.2-201ENST00000597006 317 ntBASIC3.63□□□□□ -1.83
ATF3P18847 AC078899.3-201ENST00000599065 212 ntBASIC3.63□□□□□ -1.83
ATF3P18847 RNU6-89P-201ENST00000606519 100 ntBASIC3.63□□□□□ -1.83
ATF3P18847 RMST_3.1-201ENST00000611651 109 ntBASIC3.63□□□□□ -1.83
ATF3P18847 AC024614.3-201ENST00000637860 256 ntBASIC3.63□□□□□ -1.83
ATF3P18847 ZNF72P-201ENST00000425869 1908 ntBASIC3.63□□□□□ -1.83
ATF3P18847 AL365440.2-201ENST00000419738 2597 ntTSL 2 BASIC3.63□□□□□ -1.83
ATF3P18847 TMPRSS11A-201ENST00000334830 3054 ntAPPRIS P3 TSL 2 BASIC3.63□□□□□ -1.83
ATF3P18847 CDK1-209ENST00000614696 1884 ntTSL 5 BASIC3.62□□□□□ -1.83
ATF3P18847 OR4K2-204ENST00000641885 8681 ntAPPRIS P1 BASIC3.62□□□□□ -1.83
ATF3P18847 ZNF470-202ENST00000391709 6601 ntAPPRIS P1 TSL 5 BASIC3.62□□□□□ -1.83
ATF3P18847 CUL3-203ENST00000409096 2701 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
ATF3P18847 RNU6-266P-201ENST00000364225 107 ntBASIC3.62□□□□□ -1.83
ATF3P18847 RNA5SP219-201ENST00000390940 113 ntBASIC3.62□□□□□ -1.83
ATF3P18847 PGBD4P6-201ENST00000421501 610 ntBASIC3.62□□□□□ -1.83
ATF3P18847 PLCE1-AS2-203ENST00000433038 396 ntTSL 2 BASIC3.62□□□□□ -1.83
ATF3P18847 AC010975.1-201ENST00000443301 669 ntTSL 3 BASIC3.62□□□□□ -1.83
ATF3P18847 RPS27AP9-201ENST00000477681 438 ntBASIC3.62□□□□□ -1.83
ATF3P18847 AC107208.1-201ENST00000508265 519 ntTSL 4 BASIC3.62□□□□□ -1.83
ATF3P18847 AC116655.1-201ENST00000508324 901 ntBASIC3.62□□□□□ -1.83
ATF3P18847 RNU6-581P-201ENST00000516214 105 ntBASIC3.62□□□□□ -1.83
ATF3P18847 SNORA25.17-201ENST00000517184 124 ntBASIC3.62□□□□□ -1.83
ATF3P18847 CYCSP27-201ENST00000527643 293 ntBASIC3.62□□□□□ -1.83
ATF3P18847 LINC02253-201ENST00000559321 448 ntTSL 2 BASIC3.62□□□□□ -1.83
ATF3P18847 AC113137.1-201ENST00000591869 558 ntTSL 4 BASIC3.62□□□□□ -1.83
ATF3P18847 VN1R80P-201ENST00000597126 338 ntBASIC3.62□□□□□ -1.83
ATF3P18847 AL391813.1-201ENST00000603098 260 ntBASIC3.62□□□□□ -1.83
ATF3P18847 AC092747.3-201ENST00000603769 301 ntBASIC3.62□□□□□ -1.83
ATF3P18847 AC092807.2-201ENST00000609367 243 ntBASIC3.62□□□□□ -1.83
ATF3P18847 AC090115.4-201ENST00000609970 188 ntBASIC3.62□□□□□ -1.83
ATF3P18847 DCAF17-212ENST00000611110 975 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
ATF3P18847 AC002553.4-201ENST00000616896 331 ntBASIC3.62□□□□□ -1.83
ATF3P18847 AC103705.1-201ENST00000619013 241 ntBASIC3.62□□□□□ -1.83
ATF3P18847 AKAP9-202ENST00000358100 10309 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
ATF3P18847 LRRC39-201ENST00000342895 1881 ntAPPRIS P1 TSL 5 BASIC3.62□□□□□ -1.83
ATF3P18847 ATP11C-201ENST00000327569 6115 ntAPPRIS P3 TSL 1 (best) BASIC3.62□□□□□ -1.83
ATF3P18847 OR8K3-203ENST00000641662 2438 ntAPPRIS P1 BASIC3.61□□□□□ -1.83
ATF3P18847 DLEU2_6.3-201ENST00000340052 136 ntBASIC3.61□□□□□ -1.83
ATF3P18847 Y_RNA.378-201ENST00000365652 113 ntBASIC3.61□□□□□ -1.83
ATF3P18847 MIR518C-201ENST00000384822 101 ntBASIC3.61□□□□□ -1.83
ATF3P18847 EI24P2-201ENST00000397776 1076 ntBASIC3.61□□□□□ -1.83
ATF3P18847 ELF3-AS1-201ENST00000415582 500 ntTSL 2 BASIC3.61□□□□□ -1.83
ATF3P18847 AL500522.1-201ENST00000423667 318 ntTSL 3 BASIC3.61□□□□□ -1.83
ATF3P18847 PTGES3P4-201ENST00000426243 356 ntBASIC3.61□□□□□ -1.83
ATF3P18847 TRIAP1P1-201ENST00000427062 225 ntBASIC3.61□□□□□ -1.83
ATF3P18847 AL162400.2-201ENST00000427547 157 ntTSL 3 BASIC3.61□□□□□ -1.83
ATF3P18847 AL024497.2-201ENST00000457081 317 ntTSL 3 BASIC3.61□□□□□ -1.83
ATF3P18847 AC006026.2-201ENST00000457376 180 ntBASIC3.61□□□□□ -1.83
ATF3P18847 AC074033.2-201ENST00000480669 535 ntTSL 3 BASIC3.61□□□□□ -1.83
ATF3P18847 RN7SL636P-201ENST00000497504 294 ntBASIC3.61□□□□□ -1.83
ATF3P18847 RNU6-1038P-201ENST00000516516 104 ntBASIC3.61□□□□□ -1.83
ATF3P18847 Y_RNA.687-201ENST00000516558 91 ntBASIC3.61□□□□□ -1.83
ATF3P18847 AC069113.1-201ENST00000517763 267 ntBASIC3.61□□□□□ -1.83
ATF3P18847 AC096558.1-203ENST00000550516 574 ntTSL 3 BASIC3.61□□□□□ -1.83
ATF3P18847 AL049775.2-201ENST00000557547 558 ntTSL 4 BASIC3.61□□□□□ -1.83
ATF3P18847 AC087463.1-201ENST00000568541 556 ntTSL 2 BASIC3.61□□□□□ -1.83
ATF3P18847 AC131274.4-201ENST00000577879 398 ntTSL 3 BASIC3.61□□□□□ -1.83
ATF3P18847 RPL23AP78-201ENST00000599928 470 ntBASIC3.61□□□□□ -1.83
ATF3P18847 BX546450.2-201ENST00000602419 435 ntTSL 5 BASIC3.61□□□□□ -1.83
ATF3P18847 AP000907.4-201ENST00000604143 237 ntBASIC3.61□□□□□ -1.83
ATF3P18847 AC091152.3-201ENST00000604227 325 ntBASIC3.61□□□□□ -1.83
ATF3P18847 AC002044.1-201ENST00000606707 158 ntBASIC3.61□□□□□ -1.83
ATF3P18847 USP12-203ENST00000620323 349 ntTSL 3 BASIC3.61□□□□□ -1.83
ATF3P18847 DLEU2_6.2-201ENST00000620994 136 ntBASIC3.61□□□□□ -1.83
ATF3P18847 DLX6-AS1_1.1-201ENST00000621599 180 ntBASIC3.61□□□□□ -1.83
ATF3P18847 PTP4A2-220ENST00000627328 615 ntTSL 5 BASIC3.61□□□□□ -1.83
ATF3P18847 MIR3662-201ENST00000637030 95 ntBASIC3.61□□□□□ -1.83
ATF3P18847 LINC00890-202ENST00000569275 4595 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
ATF3P18847 SYNE1-212ENST00000423061 27436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.61□□□□□ -1.83
ATF3P18847 LPP-221ENST00000618621 18277 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
ATF3P18847 LPP-222ENST00000640853 18277 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
ATF3P18847 U3.6-201ENST00000363622 211 ntBASIC3.6□□□□□ -1.83
ATF3P18847 RNU6-522P-201ENST00000364497 107 ntBASIC3.6□□□□□ -1.83
ATF3P18847 RNU6-19P-201ENST00000384718 107 ntBASIC3.6□□□□□ -1.83
ATF3P18847 SNORA46-201ENST00000384762 135 ntBASIC3.6□□□□□ -1.83
ATF3P18847 RNU6ATAC3P-201ENST00000387974 126 ntBASIC3.6□□□□□ -1.83
ATF3P18847 5S_rRNA.2-201ENST00000391293 112 ntBASIC3.6□□□□□ -1.83
ATF3P18847 AC010967.2-201ENST00000418451 333 ntTSL 2 BASIC3.6□□□□□ -1.83
ATF3P18847 MAGEA8-AS1-201ENST00000427671 476 ntTSL 3 BASIC3.6□□□□□ -1.83
ATF3P18847 MYCBP2-AS1-203ENST00000450627 349 ntTSL 3 BASIC3.6□□□□□ -1.83
ATF3P18847 ZEB1-AS1-204ENST00000450834 576 ntTSL 3 BASIC3.6□□□□□ -1.83
ATF3P18847 AC004936.1-201ENST00000451755 361 ntTSL 3 BASIC3.6□□□□□ -1.83
ATF3P18847 HMGN2P26-201ENST00000463169 339 ntBASIC3.6□□□□□ -1.83
ATF3P18847 RPL23AP14-201ENST00000468281 468 ntBASIC3.6□□□□□ -1.83
ATF3P18847 LINC00971-201ENST00000482721 535 ntTSL 2 BASIC3.6□□□□□ -1.83
ATF3P18847 AC243972.3-201ENST00000539655 198 ntBASIC3.6□□□□□ -1.83
ATF3P18847 AL132780.1-202ENST00000548322 591 ntTSL 4 BASIC3.6□□□□□ -1.83
ATF3P18847 LINC01533-205ENST00000593056 607 ntTSL 3 BASIC3.6□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 105.7 ms