Protein–RNA interactions for Protein: P05114

HMGN1, Non-histone chromosomal protein HMG-14, humanhuman

Predictions only

Length 100 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P05114 MIR4498-201ENST00000577599 66 ntBASIC0.45□□□□□ -2.34
HMGN1P05114 MIR4782-201ENST00000577987 79 ntBASIC0.45□□□□□ -2.34
HMGN1P05114 MIR3664-201ENST00000579074 99 ntBASIC0.45□□□□□ -2.34
HMGN1P05114 LINC02109-204ENST00000602801 563 ntTSL 4 BASIC0.45□□□□□ -2.34
HMGN1P05114 AC093788.1-201ENST00000609356 927 ntBASIC0.45□□□□□ -2.34
HMGN1P05114 AC104465.1-201ENST00000611365 139 ntBASIC0.45□□□□□ -2.34
HMGN1P05114 RMST_4.1-201ENST00000616886 107 ntBASIC0.45□□□□□ -2.34
HMGN1P05114 AC068647.2-201ENST00000637380 353 ntBASIC0.45□□□□□ -2.34
HMGN1P05114 AC068700.1-201ENST00000565862 3754 ntBASIC0.45□□□□□ -2.34
HMGN1P05114 RNU6-529P-201ENST00000363383 104 ntBASIC0.44□□□□□ -2.34
HMGN1P05114 SNRPE-201ENST00000367208 355 ntTSL 2 BASIC0.44□□□□□ -2.34
HMGN1P05114 Y_RNA.548-201ENST00000384656 105 ntBASIC0.44□□□□□ -2.34
HMGN1P05114 LINC01866-201ENST00000421181 201 ntTSL 3 BASIC0.44□□□□□ -2.34
HMGN1P05114 ISCA1P1-201ENST00000426679 387 ntBASIC0.44□□□□□ -2.34
HMGN1P05114 INTS6L-AS1-201ENST00000430820 398 ntTSL 3 BASIC0.44□□□□□ -2.34
HMGN1P05114 AL138900.1-201ENST00000449345 399 ntTSL 3 BASIC0.44□□□□□ -2.34
HMGN1P05114 AC131571.1-202ENST00000454509 598 ntTSL 4 BASIC0.44□□□□□ -2.34
HMGN1P05114 AC022695.3-201ENST00000523385 478 ntTSL 3 BASIC0.44□□□□□ -2.34
HMGN1P05114 TUG1_2.1-201ENST00000614234 87 ntBASIC0.44□□□□□ -2.34
HMGN1P05114 AC013470.4-201ENST00000619978 986 ntBASIC0.44□□□□□ -2.34
HMGN1P05114 AC084824.4-201ENST00000620106 731 ntBASIC0.44□□□□□ -2.34
HMGN1P05114 MIR96-201ENST00000362288 78 ntBASIC0.43□□□□□ -2.34
HMGN1P05114 RNU6-110P-201ENST00000384508 104 ntBASIC0.43□□□□□ -2.34
HMGN1P05114 RNU6-754P-201ENST00000391166 107 ntBASIC0.43□□□□□ -2.34
HMGN1P05114 RNU2-7P-201ENST00000410794 178 ntBASIC0.43□□□□□ -2.34
HMGN1P05114 FNDC1-IT1-201ENST00000419703 516 ntTSL 3 BASIC0.43□□□□□ -2.34
HMGN1P05114 AC073311.1-201ENST00000420146 505 ntTSL 5 BASIC0.43□□□□□ -2.34
HMGN1P05114 MTCO2P5-201ENST00000422621 426 ntBASIC0.43□□□□□ -2.34
HMGN1P05114 AL669831.1-202ENST00000428504 417 ntBASIC0.43□□□□□ -2.34
HMGN1P05114 AC007285.2-201ENST00000433088 518 ntTSL 3 BASIC0.43□□□□□ -2.34
HMGN1P05114 SNRPEP7-201ENST00000438350 220 ntBASIC0.43□□□□□ -2.34
HMGN1P05114 GTF2IP13-201ENST00000438487 386 ntBASIC0.43□□□□□ -2.34
HMGN1P05114 LINC01073-201ENST00000441659 149 ntTSL 3 BASIC0.43□□□□□ -2.34
HMGN1P05114 AC044781.1-201ENST00000446193 570 ntTSL 3 BASIC0.43□□□□□ -2.34
HMGN1P05114 AC092264.1-201ENST00000456002 713 ntTSL 5 BASIC0.43□□□□□ -2.34
HMGN1P05114 SNORD124-201ENST00000459577 104 ntBASIC0.43□□□□□ -2.34
HMGN1P05114 RNA5SP384-201ENST00000516615 116 ntBASIC0.43□□□□□ -2.34
HMGN1P05114 AC011604.1-201ENST00000545978 196 ntBASIC0.43□□□□□ -2.34
HMGN1P05114 AC025423.5-201ENST00000550230 219 ntBASIC0.43□□□□□ -2.34
HMGN1P05114 HSPE1P4-201ENST00000550617 308 ntBASIC0.43□□□□□ -2.34
HMGN1P05114 AC025887.1-201ENST00000578349 264 ntTSL 3 BASIC0.43□□□□□ -2.34
HMGN1P05114 AC104984.5-201ENST00000586878 94 ntBASIC0.43□□□□□ -2.34
HMGN1P05114 AP001033.2-201ENST00000609701 1003 ntBASIC0.43□□□□□ -2.34
HMGN1P05114 MIR6715A-201ENST00000615929 79 ntBASIC0.43□□□□□ -2.34
HMGN1P05114 SENP7-207ENST00000394095 4945 ntAPPRIS P3 TSL 1 (best) BASIC0.42□□□□□ -2.34
HMGN1P05114 C8orf59-201ENST00000321777 325 ntTSL 1 (best) BASIC0.42□□□□□ -2.34
HMGN1P05114 RNA5SP361-201ENST00000362686 118 ntBASIC0.42□□□□□ -2.34
HMGN1P05114 RNU1-93P-201ENST00000364704 169 ntBASIC0.42□□□□□ -2.34
HMGN1P05114 AL590084.2-201ENST00000401481 382 ntBASIC0.42□□□□□ -2.34
HMGN1P05114 DHFRP6-201ENST00000401776 268 ntBASIC0.42□□□□□ -2.34
HMGN1P05114 RNU6-321P-201ENST00000410912 106 ntBASIC0.42□□□□□ -2.34
HMGN1P05114 AL139397.1-201ENST00000430456 644 ntTSL 2 BASIC0.42□□□□□ -2.34
HMGN1P05114 AL161935.3-201ENST00000433770 347 ntTSL 2 BASIC0.42□□□□□ -2.34
HMGN1P05114 PCDH9-AS3-201ENST00000434073 479 ntTSL 2 BASIC0.42□□□□□ -2.34
HMGN1P05114 LINC01549-201ENST00000440664 714 ntTSL 3 BASIC0.42□□□□□ -2.34
HMGN1P05114 AC003988.1-201ENST00000447198 578 ntTSL 5 BASIC0.42□□□□□ -2.34
HMGN1P05114 MTND1P9-201ENST00000453775 944 ntBASIC0.42□□□□□ -2.34
HMGN1P05114 AC108729.3-201ENST00000513484 108 ntBASIC0.42□□□□□ -2.34
HMGN1P05114 RNU5A-4P-201ENST00000516588 111 ntBASIC0.42□□□□□ -2.34
HMGN1P05114 RNA5SP102-201ENST00000516865 106 ntBASIC0.42□□□□□ -2.34
HMGN1P05114 LINC02461-201ENST00000553211 836 ntTSL 3 BASIC0.42□□□□□ -2.34
HMGN1P05114 AC011939.2-201ENST00000567396 428 ntTSL 3 BASIC0.42□□□□□ -2.34
HMGN1P05114 LINC01195-201ENST00000570118 451 ntTSL 3 BASIC0.42□□□□□ -2.34
HMGN1P05114 ZNF415-224ENST00000601493 2132 ntTSL 1 (best) BASIC0.42□□□□□ -2.34
HMGN1P05114 BNIP3P31-201ENST00000604515 566 ntBASIC0.42□□□□□ -2.34
HMGN1P05114 AC105129.3-201ENST00000605455 485 ntBASIC0.42□□□□□ -2.34
HMGN1P05114 AC123767.1-202ENST00000620407 817 ntBASIC0.42□□□□□ -2.34
HMGN1P05114 AC120349.3-201ENST00000624377 529 ntBASIC0.42□□□□□ -2.34
HMGN1P05114 RNY1P10-201ENST00000363268 113 ntBASIC0.41□□□□□ -2.34
HMGN1P05114 MIR29B2-201ENST00000385055 81 ntBASIC0.41□□□□□ -2.34
HMGN1P05114 MIR605-201ENST00000385078 83 ntBASIC0.41□□□□□ -2.34
HMGN1P05114 MIR548B-201ENST00000385247 97 ntBASIC0.41□□□□□ -2.34
HMGN1P05114 AL121904.1-202ENST00000416638 656 ntTSL 5 BASIC0.41□□□□□ -2.34
HMGN1P05114 AL669831.2-201ENST00000422528 456 ntTSL 5 BASIC0.41□□□□□ -2.34
HMGN1P05114 CBX3P6-201ENST00000430257 527 ntBASIC0.41□□□□□ -2.34
HMGN1P05114 AC020550.1-201ENST00000447385 163 ntBASIC0.41□□□□□ -2.34
HMGN1P05114 BTF3P15-201ENST00000455606 336 ntBASIC0.41□□□□□ -2.34
HMGN1P05114 RPL30P6-201ENST00000475925 342 ntBASIC0.41□□□□□ -2.34
HMGN1P05114 RNU6-390P-201ENST00000516259 103 ntBASIC0.41□□□□□ -2.34
HMGN1P05114 RNA5SP481-201ENST00000516814 122 ntBASIC0.41□□□□□ -2.34
HMGN1P05114 AC007495.2-202ENST00000564102 535 ntTSL 4 BASIC0.41□□□□□ -2.34
HMGN1P05114 AC068790.6-201ENST00000602558 258 ntBASIC0.41□□□□□ -2.34
HMGN1P05114 AL390208.1-201ENST00000605885 644 ntBASIC0.41□□□□□ -2.34
HMGN1P05114 DLEU1_2.1-201ENST00000617920 342 ntBASIC0.41□□□□□ -2.34
HMGN1P05114 AC009541.1-201ENST00000438279 2662 ntBASIC0.41□□□□□ -2.34
HMGN1P05114 RNU6-223P-201ENST00000362830 107 ntBASIC0.4□□□□□ -2.35
HMGN1P05114 RNU6-655P-201ENST00000362858 107 ntBASIC0.4□□□□□ -2.35
HMGN1P05114 Y_RNA.234-201ENST00000364409 97 ntBASIC0.4□□□□□ -2.35
HMGN1P05114 RNU6-898P-201ENST00000365627 104 ntBASIC0.4□□□□□ -2.35
HMGN1P05114 MIR200A-201ENST00000384875 90 ntBASIC0.4□□□□□ -2.35
HMGN1P05114 AC114737.2-201ENST00000421583 173 ntBASIC0.4□□□□□ -2.35
HMGN1P05114 AC063976.4-201ENST00000421971 163 ntBASIC0.4□□□□□ -2.35
HMGN1P05114 AC234064.1-201ENST00000436312 247 ntBASIC0.4□□□□□ -2.35
HMGN1P05114 RPL39P6-201ENST00000448289 150 ntBASIC0.4□□□□□ -2.35
HMGN1P05114 AC108733.1-201ENST00000479244 705 ntTSL 3 BASIC0.4□□□□□ -2.35
HMGN1P05114 AC108752.1-203ENST00000496674 339 ntTSL 5 BASIC0.4□□□□□ -2.35
HMGN1P05114 AP001001.1-201ENST00000532422 826 ntTSL 3 BASIC0.4□□□□□ -2.35
HMGN1P05114 AC022469.2-201ENST00000554759 396 ntTSL 5 BASIC0.4□□□□□ -2.35
HMGN1P05114 MIR4769-201ENST00000584126 77 ntBASIC0.4□□□□□ -2.35
HMGN1P05114 AP001029.2-202ENST00000588197 739 ntTSL 3 BASIC0.4□□□□□ -2.35
Retrieved 100 of 98,524 protein–RNA pairs in 102.5 ms