Protein–RNA interactions for Protein: O95476

CTDNEP1, CTD nuclear envelope phosphatase 1, humanhuman

Predictions only

Length 244 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1O95476 AC020661.3-201ENST00000558101 414 ntTSL 3 BASIC1.85□□□□□ -2.11
CTDNEP1O95476 AC007151.1-201ENST00000572774 483 ntBASIC1.85□□□□□ -2.11
CTDNEP1O95476 RNASEH2B-AS1-206ENST00000601286 657 ntTSL 5 BASIC1.85□□□□□ -2.11
CTDNEP1O95476 AL021997.1-201ENST00000605757 193 ntBASIC1.85□□□□□ -2.11
CTDNEP1O95476 AC091834.1-201ENST00000614543 472 ntBASIC1.85□□□□□ -2.11
CTDNEP1O95476 AC093648.1-201ENST00000623546 606 ntBASIC1.85□□□□□ -2.11
CTDNEP1O95476 AC091932.3-201ENST00000624223 323 ntBASIC1.85□□□□□ -2.11
CTDNEP1O95476 ECT2-211ENST00000441497 2825 ntAPPRIS P2 TSL 1 (best) BASIC1.85□□□□□ -2.11
CTDNEP1O95476 MTND4P23-201ENST00000447723 1363 ntBASIC1.85□□□□□ -2.11
CTDNEP1O95476 DPY19L2P1-203ENST00000458672 3347 ntTSL 1 (best) BASIC1.84□□□□□ -2.11
CTDNEP1O95476 AC073343.1-201ENST00000328239 651 ntBASIC1.84□□□□□ -2.11
CTDNEP1O95476 Y_RNA.359-201ENST00000365498 102 ntBASIC1.84□□□□□ -2.11
CTDNEP1O95476 RNU6-74P-201ENST00000384235 107 ntBASIC1.84□□□□□ -2.11
CTDNEP1O95476 RNU2-39P-201ENST00000410604 198 ntBASIC1.84□□□□□ -2.11
CTDNEP1O95476 LINC00301-202ENST00000412599 772 ntTSL 1 (best) BASIC1.84□□□□□ -2.11
CTDNEP1O95476 AL158840.1-201ENST00000414132 523 ntTSL 3 BASIC1.84□□□□□ -2.11
CTDNEP1O95476 OR51A5P-201ENST00000415429 942 ntBASIC1.84□□□□□ -2.11
CTDNEP1O95476 SPATA17-AS1-201ENST00000415765 420 ntTSL 5 BASIC1.84□□□□□ -2.11
CTDNEP1O95476 C1DP2-201ENST00000418167 426 ntBASIC1.84□□□□□ -2.11
CTDNEP1O95476 AC000123.1-201ENST00000418215 516 ntTSL 5 BASIC1.84□□□□□ -2.11
CTDNEP1O95476 AL109913.1-201ENST00000421173 514 ntBASIC1.84□□□□□ -2.11
CTDNEP1O95476 AL162726.4-201ENST00000422010 673 ntTSL 5 BASIC1.84□□□□□ -2.11
CTDNEP1O95476 MED13P1-201ENST00000428342 171 ntBASIC1.84□□□□□ -2.11
CTDNEP1O95476 CALM2P2-201ENST00000428512 440 ntBASIC1.84□□□□□ -2.11
CTDNEP1O95476 GYPB-201ENST00000429670 239 ntTSL 1 (best) BASIC1.84□□□□□ -2.11
CTDNEP1O95476 TPT1P7-201ENST00000458300 517 ntBASIC1.84□□□□□ -2.11
CTDNEP1O95476 RNU6-956P-201ENST00000458868 103 ntBASIC1.84□□□□□ -2.11
CTDNEP1O95476 AC080013.2-201ENST00000460866 323 ntBASIC1.84□□□□□ -2.11
CTDNEP1O95476 AL121769.1-201ENST00000469473 401 ntBASIC1.84□□□□□ -2.11
CTDNEP1O95476 AC079943.2-201ENST00000488999 716 ntTSL 3 BASIC1.84□□□□□ -2.11
CTDNEP1O95476 RBBP4P6-201ENST00000508098 202 ntBASIC1.84□□□□□ -2.11
CTDNEP1O95476 LINC02174-201ENST00000508977 553 ntTSL 3 BASIC1.84□□□□□ -2.11
CTDNEP1O95476 AC079349.1-201ENST00000509096 589 ntTSL 2 BASIC1.84□□□□□ -2.11
CTDNEP1O95476 AC096711.2-201ENST00000510592 454 ntTSL 5 BASIC1.84□□□□□ -2.11
CTDNEP1O95476 AC108078.2-201ENST00000510750 236 ntBASIC1.84□□□□□ -2.11
CTDNEP1O95476 AC093206.1-201ENST00000515364 497 ntTSL 3 BASIC1.84□□□□□ -2.11
CTDNEP1O95476 AF117829.1-203ENST00000520306 421 ntTSL 5 BASIC1.84□□□□□ -2.11
CTDNEP1O95476 AC087883.1-201ENST00000551882 391 ntBASIC1.84□□□□□ -2.11
CTDNEP1O95476 AL355076.2-202ENST00000553754 574 ntTSL 4 BASIC1.84□□□□□ -2.11
CTDNEP1O95476 PCLAF-207ENST00000559519 749 ntTSL 2 BASIC1.84□□□□□ -2.11
CTDNEP1O95476 AC006362.1-201ENST00000567392 174 ntBASIC1.84□□□□□ -2.11
CTDNEP1O95476 AC012213.3-201ENST00000577199 777 ntBASIC1.84□□□□□ -2.11
CTDNEP1O95476 AC011477.3-201ENST00000585571 403 ntTSL 5 BASIC1.84□□□□□ -2.11
CTDNEP1O95476 AC005261.5-201ENST00000596280 355 ntBASIC1.84□□□□□ -2.11
CTDNEP1O95476 BNIP3P9-201ENST00000603714 553 ntBASIC1.84□□□□□ -2.11
CTDNEP1O95476 AC006566.1-201ENST00000608943 513 ntBASIC1.84□□□□□ -2.11
CTDNEP1O95476 AC099842.1-201ENST00000619919 596 ntBASIC1.84□□□□□ -2.11
CTDNEP1O95476 AC136475.10-201ENST00000620253 385 ntBASIC1.84□□□□□ -2.11
CTDNEP1O95476 FRG1KP-201ENST00000623592 341 ntBASIC1.84□□□□□ -2.11
CTDNEP1O95476 AL512643.1-201ENST00000635735 524 ntBASIC1.84□□□□□ -2.11
CTDNEP1O95476 AC090582.1-201ENST00000636321 199 ntBASIC1.84□□□□□ -2.11
CTDNEP1O95476 GYPB-216ENST00000638448 363 ntAPPRIS P1 TSL 1 (best) BASIC1.84□□□□□ -2.11
CTDNEP1O95476 CD44-239ENST00000639002 528 ntTSL 1 (best) BASIC1.84□□□□□ -2.11
CTDNEP1O95476 ANKRD20A9P-201ENST00000457997 2978 ntBASIC1.84□□□□□ -2.12
CTDNEP1O95476 AC103710.2-202ENST00000641454 2853 ntBASIC1.84□□□□□ -2.12
CTDNEP1O95476 AC110491.1-201ENST00000562191 2010 ntBASIC1.83□□□□□ -2.12
CTDNEP1O95476 AC006026.1-201ENST00000444025 1803 ntBASIC1.83□□□□□ -2.12
CTDNEP1O95476 IL36B-202ENST00000327407 1052 ntAPPRIS P1 TSL 1 (best) BASIC1.83□□□□□ -2.12
CTDNEP1O95476 RNU6-61P-201ENST00000365528 109 ntBASIC1.83□□□□□ -2.12
CTDNEP1O95476 RNU6-190P-201ENST00000384154 102 ntBASIC1.83□□□□□ -2.12
CTDNEP1O95476 TRDJ3-201ENST00000390476 59 ntAPPRIS P1 BASIC1.83□□□□□ -2.12
CTDNEP1O95476 DEFB108C-201ENST00000400154 252 ntBASIC1.83□□□□□ -2.12
CTDNEP1O95476 MIR1323-201ENST00000408090 73 ntBASIC1.83□□□□□ -2.12
CTDNEP1O95476 RN7SKP284-201ENST00000411002 343 ntBASIC1.83□□□□□ -2.12
CTDNEP1O95476 RNA5SP270-201ENST00000411361 118 ntBASIC1.83□□□□□ -2.12
CTDNEP1O95476 RPL26P27-201ENST00000414397 437 ntBASIC1.83□□□□□ -2.12
CTDNEP1O95476 AC133106.1-201ENST00000419029 397 ntTSL 3 BASIC1.83□□□□□ -2.12
CTDNEP1O95476 MTCO2P34-201ENST00000421994 607 ntBASIC1.83□□□□□ -2.12
CTDNEP1O95476 AL353729.1-201ENST00000425044 720 ntBASIC1.83□□□□□ -2.12
CTDNEP1O95476 AL024508.1-201ENST00000432477 505 ntTSL 2 BASIC1.83□□□□□ -2.12
CTDNEP1O95476 AL591704.1-201ENST00000432574 275 ntBASIC1.83□□□□□ -2.12
CTDNEP1O95476 AC005019.2-201ENST00000434321 359 ntTSL 5 BASIC1.83□□□□□ -2.12
CTDNEP1O95476 AC098831.1-201ENST00000440661 216 ntBASIC1.83□□□□□ -2.12
CTDNEP1O95476 AL356124.2-201ENST00000442449 391 ntTSL 5 BASIC1.83□□□□□ -2.12
CTDNEP1O95476 MTATP6P26-201ENST00000445926 662 ntBASIC1.83□□□□□ -2.12
CTDNEP1O95476 Z83846.1-201ENST00000446798 265 ntBASIC1.83□□□□□ -2.12
CTDNEP1O95476 AC116666.1-201ENST00000453915 551 ntTSL 5 BASIC1.83□□□□□ -2.12
CTDNEP1O95476 AMD1P1-201ENST00000457220 922 ntBASIC1.83□□□□□ -2.12
CTDNEP1O95476 AC016751.1-201ENST00000458254 306 ntTSL 3 BASIC1.83□□□□□ -2.12
CTDNEP1O95476 RNU6-953P-201ENST00000459154 107 ntBASIC1.83□□□□□ -2.12
CTDNEP1O95476 AC026780.2-201ENST00000503489 730 ntTSL 5 BASIC1.83□□□□□ -2.12
CTDNEP1O95476 AC117522.2-201ENST00000510049 657 ntBASIC1.83□□□□□ -2.12
CTDNEP1O95476 LINC02118-202ENST00000510583 419 ntTSL 3 BASIC1.83□□□□□ -2.12
CTDNEP1O95476 AC079140.3-201ENST00000511111 550 ntBASIC1.83□□□□□ -2.12
CTDNEP1O95476 GTF2H2C-212ENST00000512736 832 ntTSL 1 (best) BASIC1.83□□□□□ -2.12
CTDNEP1O95476 RNU6-123P-201ENST00000516163 102 ntBASIC1.83□□□□□ -2.12
CTDNEP1O95476 RNU6-677P-201ENST00000516914 101 ntBASIC1.83□□□□□ -2.12
CTDNEP1O95476 TMCO5B-203ENST00000529623 509 ntTSL 4 BASIC1.83□□□□□ -2.12
CTDNEP1O95476 MIR3122-201ENST00000577243 73 ntBASIC1.83□□□□□ -2.12
CTDNEP1O95476 AC069061.2-202ENST00000580280 357 ntTSL 3 BASIC1.83□□□□□ -2.12
CTDNEP1O95476 MIR3682-201ENST00000581338 84 ntBASIC1.83□□□□□ -2.12
CTDNEP1O95476 PIGPP4-201ENST00000584447 307 ntBASIC1.83□□□□□ -2.12
CTDNEP1O95476 AC005357.2-201ENST00000586473 583 ntTSL 2 BASIC1.83□□□□□ -2.12
CTDNEP1O95476 AC007229.1-201ENST00000590455 412 ntBASIC1.83□□□□□ -2.12
CTDNEP1O95476 AC008121.1-201ENST00000603244 268 ntBASIC1.83□□□□□ -2.12
CTDNEP1O95476 AL096840.1-201ENST00000603287 93 ntBASIC1.83□□□□□ -2.12
CTDNEP1O95476 RN7SKP299-201ENST00000606679 301 ntBASIC1.83□□□□□ -2.12
CTDNEP1O95476 AC126118.1-201ENST00000607744 628 ntBASIC1.83□□□□□ -2.12
CTDNEP1O95476 TP73-AS1.1-201ENST00000611447 161 ntBASIC1.83□□□□□ -2.12
CTDNEP1O95476 VBP1-204ENST00000625964 1547 ntTSL 5 BASIC1.82□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 259.6 ms