Protein–RNA interactions for Protein: O75400

PRPF40A, Pre-mRNA-processing factor 40 homolog A, humanhuman

Known RBP Predictions only

Length 957 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40AO75400 HMGN2P10-201ENST00000448085 265 ntBASIC4.42□□□□□ -1.7
PRPF40AO75400 snoU13.28-201ENST00000459235 104 ntBASIC4.42□□□□□ -1.7
PRPF40AO75400 RPL32P34-201ENST00000486380 400 ntBASIC4.42□□□□□ -1.7
PRPF40AO75400 WHAMMP2-201ENST00000512149 5482 ntTSL 5 BASIC4.42□□□□□ -1.7
PRPF40AO75400 RNU6-581P-201ENST00000516214 105 ntBASIC4.42□□□□□ -1.7
PRPF40AO75400 YPEL5P3-201ENST00000547227 352 ntBASIC4.42□□□□□ -1.7
PRPF40AO75400 CR383656.8-201ENST00000549046 145 ntBASIC4.42□□□□□ -1.7
PRPF40AO75400 AL136038.2-201ENST00000553983 283 ntTSL 3 BASIC4.42□□□□□ -1.7
PRPF40AO75400 MIR4738-201ENST00000579134 87 ntBASIC4.42□□□□□ -1.7
PRPF40AO75400 AC006557.5-201ENST00000603126 811 ntBASIC4.42□□□□□ -1.7
PRPF40AO75400 HSPE1P7-201ENST00000604681 321 ntBASIC4.42□□□□□ -1.7
PRPF40AO75400 AL137849.1-201ENST00000604767 169 ntBASIC4.42□□□□□ -1.7
PRPF40AO75400 U7.8-201ENST00000619968 63 ntBASIC4.42□□□□□ -1.7
PRPF40AO75400 AC243829.7-201ENST00000633081 225 ntBASIC4.42□□□□□ -1.7
PRPF40AO75400 ZNF266-204ENST00000590306 3317 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
PRPF40AO75400 CEP170-215ENST00000481987 3031 ntTSL 5 BASIC4.42□□□□□ -1.7
PRPF40AO75400 AK9-201ENST00000285397 2566 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
PRPF40AO75400 USP33-201ENST00000357428 4155 ntTSL 5 BASIC4.41□□□□□ -1.7
PRPF40AO75400 ERBIN-212ENST00000508515 4374 ntTSL 5 BASIC4.41□□□□□ -1.7
PRPF40AO75400 RNU1-140P-201ENST00000365040 165 ntBASIC4.41□□□□□ -1.7
PRPF40AO75400 AL513008.1-201ENST00000412701 161 ntTSL 5 BASIC4.41□□□□□ -1.7
PRPF40AO75400 BPY2DP-201ENST00000422208 265 ntBASIC4.41□□□□□ -1.7
PRPF40AO75400 AL117339.2-201ENST00000430475 180 ntBASIC4.41□□□□□ -1.7
PRPF40AO75400 AC004869.2-201ENST00000436501 229 ntTSL 3 BASIC4.41□□□□□ -1.7
PRPF40AO75400 SNORA71B-202ENST00000439232 272 ntBASIC4.41□□□□□ -1.7
PRPF40AO75400 AL353705.4-201ENST00000449661 238 ntBASIC4.41□□□□□ -1.7
PRPF40AO75400 AC117465.1-201ENST00000457125 522 ntTSL 3 BASIC4.41□□□□□ -1.7
PRPF40AO75400 AC063944.1-201ENST00000496943 295 ntTSL 3 BASIC4.41□□□□□ -1.7
PRPF40AO75400 SNORA40.15-201ENST00000516884 107 ntBASIC4.41□□□□□ -1.7
PRPF40AO75400 AC021739.1-201ENST00000559631 174 ntBASIC4.41□□□□□ -1.7
PRPF40AO75400 AC113146.1-202ENST00000560259 433 ntTSL 5 BASIC4.41□□□□□ -1.7
PRPF40AO75400 PWRN1-209ENST00000568019 359 ntTSL 3 BASIC4.41□□□□□ -1.7
PRPF40AO75400 AC004147.1-201ENST00000580658 299 ntTSL 3 BASIC4.41□□□□□ -1.7
PRPF40AO75400 LINC01002-215ENST00000632203 314 ntTSL 5 BASIC4.41□□□□□ -1.7
PRPF40AO75400 MIR3199-2-201ENST00000636243 86 ntBASIC4.41□□□□□ -1.7
PRPF40AO75400 ABCA12-202ENST00000389661 7005 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
PRPF40AO75400 LRFN5-204ENST00000554171 4253 ntAPPRIS ALT2 TSL 1 (best) BASIC4.41□□□□□ -1.7
PRPF40AO75400 MCF2-202ENST00000370573 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC4.41□□□□□ -1.7
PRPF40AO75400 SNX16-212ENST00000615066 1918 ntTSL 5 BASIC4.4□□□□□ -1.7
PRPF40AO75400 HDX-202ENST00000373177 2924 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.7
PRPF40AO75400 WNK3-202ENST00000375159 5403 ntAPPRIS P3 TSL 1 (best) BASIC4.4□□□□□ -1.7
PRPF40AO75400 C5orf42-205ENST00000508244 11062 ntAPPRIS P2 TSL 5 BASIC4.4□□□□□ -1.7
PRPF40AO75400 ADAMTS9-AS1-207ENST00000594810 3609 ntTSL 4 BASIC4.4□□□□□ -1.71
PRPF40AO75400 RNU6-874P-201ENST00000362390 105 ntBASIC4.4□□□□□ -1.71
PRPF40AO75400 U3.13-201ENST00000364804 214 ntBASIC4.4□□□□□ -1.71
PRPF40AO75400 Y_RNA.512-201ENST00000384518 102 ntBASIC4.4□□□□□ -1.71
PRPF40AO75400 RPL21P65-201ENST00000406094 466 ntBASIC4.4□□□□□ -1.71
PRPF40AO75400 AC074117.2-201ENST00000417130 397 ntBASIC4.4□□□□□ -1.71
PRPF40AO75400 AC005300.1-201ENST00000428401 373 ntBASIC4.4□□□□□ -1.71
PRPF40AO75400 CYCSP32-201ENST00000440548 321 ntBASIC4.4□□□□□ -1.71
PRPF40AO75400 DYNLT3P2-201ENST00000442517 295 ntBASIC4.4□□□□□ -1.71
PRPF40AO75400 AL162151.2-201ENST00000448875 158 ntBASIC4.4□□□□□ -1.71
PRPF40AO75400 LINC02540-201ENST00000455554 570 ntTSL 3 BASIC4.4□□□□□ -1.71
PRPF40AO75400 RAC1P2-201ENST00000511164 579 ntBASIC4.4□□□□□ -1.71
PRPF40AO75400 RN7SKP272-201ENST00000516988 232 ntBASIC4.4□□□□□ -1.71
PRPF40AO75400 AC040936.1-201ENST00000534543 172 ntTSL 5 BASIC4.4□□□□□ -1.71
PRPF40AO75400 AC007347.1-201ENST00000563879 281 ntTSL 3 BASIC4.4□□□□□ -1.71
PRPF40AO75400 RLIMP1-201ENST00000339626 1680 ntBASIC4.4□□□□□ -1.71
PRPF40AO75400 RAP2C-AS1-202ENST00000441399 3473 ntTSL 2 BASIC4.4□□□□□ -1.71
PRPF40AO75400 TEX9-207ENST00000560582 2005 ntTSL 3 BASIC4.39□□□□□ -1.71
PRPF40AO75400 TNPO1P3-201ENST00000436471 2662 ntBASIC4.39□□□□□ -1.71
PRPF40AO75400 AC106871.1-201ENST00000568324 3102 ntBASIC4.39□□□□□ -1.71
PRPF40AO75400 TAX1BP1-213ENST00000543117 3365 ntAPPRIS ALT2 TSL 2 BASIC4.39□□□□□ -1.71
PRPF40AO75400 GALNT1-201ENST00000269195 3847 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
PRPF40AO75400 IL33-203ENST00000456383 2501 ntTSL 5 BASIC4.39□□□□□ -1.71
PRPF40AO75400 RXFP1-201ENST00000307765 3842 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
PRPF40AO75400 Y_RNA.188-201ENST00000363952 111 ntBASIC4.39□□□□□ -1.71
PRPF40AO75400 RNU6-283P-201ENST00000364788 107 ntBASIC4.39□□□□□ -1.71
PRPF40AO75400 Y_RNA.358-201ENST00000365491 99 ntBASIC4.39□□□□□ -1.71
PRPF40AO75400 AL358453.1-201ENST00000422522 250 ntBASIC4.39□□□□□ -1.71
PRPF40AO75400 USP9YP16-201ENST00000430287 407 ntBASIC4.39□□□□□ -1.71
PRPF40AO75400 TEX41-209ENST00000451478 452 ntTSL 2 BASIC4.39□□□□□ -1.71
PRPF40AO75400 USP9YP23-201ENST00000455085 407 ntBASIC4.39□□□□□ -1.71
PRPF40AO75400 SNRPGP7-201ENST00000469016 106 ntBASIC4.39□□□□□ -1.71
PRPF40AO75400 RPS26P21-201ENST00000475397 348 ntBASIC4.39□□□□□ -1.71
PRPF40AO75400 MED28P2-201ENST00000475771 317 ntBASIC4.39□□□□□ -1.71
PRPF40AO75400 AC008243.1-201ENST00000504955 389 ntTSL 3 BASIC4.39□□□□□ -1.71
PRPF40AO75400 LINC02501-201ENST00000510420 426 ntTSL 2 BASIC4.39□□□□□ -1.71
PRPF40AO75400 MRPS36P4-201ENST00000534436 298 ntBASIC4.39□□□□□ -1.71
PRPF40AO75400 SARNP-203ENST00000552080 726 ntTSL 2 BASIC4.39□□□□□ -1.71
PRPF40AO75400 MYL12BP1-201ENST00000569826 507 ntBASIC4.39□□□□□ -1.71
PRPF40AO75400 AC009163.5-201ENST00000575421 637 ntBASIC4.39□□□□□ -1.71
PRPF40AO75400 AL159153.1-201ENST00000619688 317 ntBASIC4.39□□□□□ -1.71
PRPF40AO75400 LINC01002-202ENST00000631412 459 ntTSL 5 BASIC4.39□□□□□ -1.71
PRPF40AO75400 IQCG-205ENST00000455191 1981 ntAPPRIS P1 TSL 2 BASIC4.39□□□□□ -1.71
PRPF40AO75400 FAM35A-202ENST00000298786 3614 ntTSL 5 BASIC4.39□□□□□ -1.71
PRPF40AO75400 SLCO1B1-201ENST00000256958 2229 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
PRPF40AO75400 OR10J1-203ENST00000642080 3503 ntAPPRIS P1 BASIC4.39□□□□□ -1.71
PRPF40AO75400 CAB39L-206ENST00000410043 1627 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
PRPF40AO75400 LINC00648-202ENST00000555985 2885 ntTSL 2 BASIC4.39□□□□□ -1.71
PRPF40AO75400 PCLO-206ENST00000437081 3786 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
PRPF40AO75400 AC025164.2-202ENST00000499685 5699 ntTSL 3 BASIC4.38□□□□□ -1.71
PRPF40AO75400 AC002546.1-201ENST00000588041 2504 ntBASIC4.38□□□□□ -1.71
PRPF40AO75400 OR56A3-203ENST00000641160 4438 ntAPPRIS P1 BASIC4.38□□□□□ -1.71
PRPF40AO75400 GEN1-201ENST00000317402 9854 ntAPPRIS P1 TSL 2 BASIC4.38□□□□□ -1.71
PRPF40AO75400 KCNJ16-203ENST00000392671 3981 ntAPPRIS P1 TSL 2 BASIC4.38□□□□□ -1.71
PRPF40AO75400 DOCK7-218ENST00000635123 6297 ntAPPRIS ALT2 TSL 5 BASIC4.38□□□□□ -1.71
PRPF40AO75400 DMXL1-201ENST00000311085 11072 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
PRPF40AO75400 Y_RNA.276-201ENST00000364732 109 ntBASIC4.38□□□□□ -1.71
PRPF40AO75400 Y_RNA.471-201ENST00000384312 102 ntBASIC4.38□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 103.7 ms