Protein–RNA interactions for Protein: O60840

CACNA1F, Voltage-dependent L-type calcium channel subunit alpha-1F, humanhuman

Predictions only

Length 1,977 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1FO60840 MTCO1P29-201ENST00000496868 288 ntBASIC2.69□□□□□ -1.98
CACNA1FO60840 HMGB1P22-201ENST00000505315 124 ntBASIC2.69□□□□□ -1.98
CACNA1FO60840 AP001804.3-201ENST00000525146 880 ntBASIC2.69□□□□□ -1.98
CACNA1FO60840 AL356432.3-201ENST00000568952 465 ntBASIC2.69□□□□□ -1.98
CACNA1FO60840 COX6CP3-201ENST00000580869 223 ntBASIC2.69□□□□□ -1.98
CACNA1FO60840 VN1R80P-201ENST00000597126 338 ntBASIC2.69□□□□□ -1.98
CACNA1FO60840 AC103710.2-201ENST00000609912 942 ntBASIC2.69□□□□□ -1.98
CACNA1FO60840 uc_338.5-201ENST00000611839 155 ntBASIC2.69□□□□□ -1.98
CACNA1FO60840 AC068506.1-202ENST00000613388 545 ntTSL 3 BASIC2.69□□□□□ -1.98
CACNA1FO60840 C1orf141-202ENST00000371006 2053 ntAPPRIS P3 TSL 2 BASIC2.69□□□□□ -1.98
CACNA1FO60840 RNU6-1249P-201ENST00000363237 111 ntBASIC2.69□□□□□ -1.98
CACNA1FO60840 SNORD113-7-201ENST00000363762 77 ntBASIC2.69□□□□□ -1.98
CACNA1FO60840 Y_RNA.493-201ENST00000384422 102 ntBASIC2.69□□□□□ -1.98
CACNA1FO60840 HMGN2P3-201ENST00000433603 273 ntBASIC2.69□□□□□ -1.98
CACNA1FO60840 HMGN2P5-201ENST00000436882 273 ntBASIC2.69□□□□□ -1.98
CACNA1FO60840 MRPS17P3-201ENST00000465453 385 ntBASIC2.69□□□□□ -1.98
CACNA1FO60840 PPP2R2B-IT1-201ENST00000505921 447 ntTSL 3 BASIC2.69□□□□□ -1.98
CACNA1FO60840 LINC01335-201ENST00000507890 389 ntTSL 3 BASIC2.69□□□□□ -1.98
CACNA1FO60840 SNORA31.8-201ENST00000516327 108 ntBASIC2.69□□□□□ -1.98
CACNA1FO60840 SNORA40.12-201ENST00000516329 111 ntBASIC2.69□□□□□ -1.98
CACNA1FO60840 RNU6-1314P-201ENST00000517139 104 ntBASIC2.69□□□□□ -1.98
CACNA1FO60840 NCRNA00250-201ENST00000519500 519 ntTSL 4 BASIC2.69□□□□□ -1.98
CACNA1FO60840 HMGN1P28-201ENST00000521340 364 ntBASIC2.69□□□□□ -1.98
CACNA1FO60840 hsa-mir-3119-1.1-201ENST00000577602 85 ntBASIC2.69□□□□□ -1.98
CACNA1FO60840 LIVAR-201ENST00000578633 384 ntTSL 3 BASIC2.69□□□□□ -1.98
CACNA1FO60840 BDH2P1-201ENST00000602288 736 ntBASIC2.69□□□□□ -1.98
CACNA1FO60840 AL121992.2-201ENST00000606262 256 ntBASIC2.69□□□□□ -1.98
CACNA1FO60840 AL133215.3-201ENST00000609801 448 ntBASIC2.69□□□□□ -1.98
CACNA1FO60840 uc_338.15-201ENST00000615470 191 ntBASIC2.69□□□□□ -1.98
CACNA1FO60840 MIR6076-201ENST00000617521 113 ntBASIC2.69□□□□□ -1.98
CACNA1FO60840 HOTAIRM1_5.1-201ENST00000619311 145 ntBASIC2.69□□□□□ -1.98
CACNA1FO60840 DLX6-AS1_1.1-201ENST00000621599 180 ntBASIC2.69□□□□□ -1.98
CACNA1FO60840 NBPF20-202ENST00000392971 18450 ntAPPRIS P2 TSL 5 BASIC2.68□□□□□ -1.98
CACNA1FO60840 Y_RNA.132-201ENST00000363421 102 ntBASIC2.68□□□□□ -1.98
CACNA1FO60840 RNU6-1284P-201ENST00000363701 100 ntBASIC2.68□□□□□ -1.98
CACNA1FO60840 RNU6-82P-201ENST00000363970 107 ntBASIC2.68□□□□□ -1.98
CACNA1FO60840 Y_RNA.259-201ENST00000364619 101 ntBASIC2.68□□□□□ -1.98
CACNA1FO60840 Y_RNA.378-201ENST00000365652 113 ntBASIC2.68□□□□□ -1.98
CACNA1FO60840 RNU1-101P-201ENST00000391171 127 ntBASIC2.68□□□□□ -1.98
CACNA1FO60840 AL109755.1-201ENST00000401791 649 ntBASIC2.68□□□□□ -1.98
CACNA1FO60840 AJ239322.2-201ENST00000421696 575 ntTSL 5 BASIC2.68□□□□□ -1.98
CACNA1FO60840 ACTR3BP6-201ENST00000422332 1241 ntBASIC2.68□□□□□ -1.98
CACNA1FO60840 AL139289.1-201ENST00000436713 731 ntTSL 3 BASIC2.68□□□□□ -1.98
CACNA1FO60840 SSXP4-201ENST00000451349 245 ntBASIC2.68□□□□□ -1.98
CACNA1FO60840 AC019155.3-201ENST00000454957 600 ntTSL 2 BASIC2.68□□□□□ -1.98
CACNA1FO60840 AL133481.3-201ENST00000456546 333 ntTSL 3 BASIC2.68□□□□□ -1.98
CACNA1FO60840 AC083904.1-201ENST00000487828 231 ntBASIC2.68□□□□□ -1.98
CACNA1FO60840 AC112206.3-201ENST00000514578 389 ntBASIC2.68□□□□□ -1.98
CACNA1FO60840 RNU6-566P-201ENST00000516790 107 ntBASIC2.68□□□□□ -1.98
CACNA1FO60840 AC091944.1-201ENST00000521984 449 ntTSL 3 BASIC2.68□□□□□ -1.98
CACNA1FO60840 AC007619.1-201ENST00000544086 412 ntTSL 5 BASIC2.68□□□□□ -1.98
CACNA1FO60840 MIR3672-201ENST00000584290 82 ntBASIC2.68□□□□□ -1.98
CACNA1FO60840 AC004696.1-201ENST00000614345 607 ntBASIC2.68□□□□□ -1.98
CACNA1FO60840 AL355810.1-201ENST00000614629 552 ntBASIC2.68□□□□□ -1.98
CACNA1FO60840 U6.114-201ENST00000636407 96 ntBASIC2.68□□□□□ -1.98
CACNA1FO60840 AGTPBP1-205ENST00000376083 4208 ntAPPRIS P1 TSL 1 (best) BASIC2.68□□□□□ -1.98
CACNA1FO60840 NEBL-202ENST00000377122 9216 ntTSL 1 (best) BASIC2.68□□□□□ -1.98
CACNA1FO60840 DDX10P1-201ENST00000448545 1933 ntBASIC2.68□□□□□ -1.98
CACNA1FO60840 RNU6-946P-201ENST00000383878 107 ntBASIC2.67□□□□□ -1.98
CACNA1FO60840 SNORA64-201ENST00000384674 134 ntBASIC2.67□□□□□ -1.98
CACNA1FO60840 TRAV24-201ENST00000390453 343 ntAPPRIS P1 BASIC2.67□□□□□ -1.98
CACNA1FO60840 AC114491.1-201ENST00000416095 246 ntBASIC2.67□□□□□ -1.98
CACNA1FO60840 AC005062.1-207ENST00000418442 587 ntTSL 3 BASIC2.67□□□□□ -1.98
CACNA1FO60840 MED13P1-201ENST00000428342 171 ntBASIC2.67□□□□□ -1.98
CACNA1FO60840 AL451060.1-203ENST00000431307 362 ntTSL 3 BASIC2.67□□□□□ -1.98
CACNA1FO60840 NRG3-AS1-201ENST00000448936 555 ntTSL 2 BASIC2.67□□□□□ -1.98
CACNA1FO60840 FABP5P13-201ENST00000452144 328 ntBASIC2.67□□□□□ -1.98
CACNA1FO60840 AC096733.1-201ENST00000503844 402 ntTSL 3 BASIC2.67□□□□□ -1.98
CACNA1FO60840 AC004054.1-201ENST00000515111 270 ntTSL 3 BASIC2.67□□□□□ -1.98
CACNA1FO60840 Y_RNA.665-201ENST00000516177 98 ntBASIC2.67□□□□□ -1.98
CACNA1FO60840 AC100768.1-201ENST00000525512 506 ntTSL 3 BASIC2.67□□□□□ -1.98
CACNA1FO60840 DEFB130C-201ENST00000528518 237 ntTSL 1 (best) BASIC2.67□□□□□ -1.98
CACNA1FO60840 AP001825.1-201ENST00000534275 351 ntTSL 2 BASIC2.67□□□□□ -1.98
CACNA1FO60840 AC087318.1-201ENST00000536786 389 ntTSL 3 BASIC2.67□□□□□ -1.98
CACNA1FO60840 AC093027.1-201ENST00000546698 429 ntBASIC2.67□□□□□ -1.98
CACNA1FO60840 AC008083.3-202ENST00000552063 277 ntTSL 3 BASIC2.67□□□□□ -1.98
CACNA1FO60840 LINC02305-201ENST00000554142 476 ntTSL 3 BASIC2.67□□□□□ -1.98
CACNA1FO60840 TIMM9-207ENST00000555930 448 ntTSL 3 BASIC2.67□□□□□ -1.98
CACNA1FO60840 AC093249.1-201ENST00000567049 203 ntBASIC2.67□□□□□ -1.98
CACNA1FO60840 POLR3GP2-201ENST00000588366 668 ntBASIC2.67□□□□□ -1.98
CACNA1FO60840 AC092807.2-201ENST00000609367 243 ntBASIC2.67□□□□□ -1.98
CACNA1FO60840 AL359198.2-201ENST00000611836 194 ntBASIC2.67□□□□□ -1.98
CACNA1FO60840 MIR6130-201ENST00000619419 109 ntBASIC2.67□□□□□ -1.98
CACNA1FO60840 PTPRQ-209ENST00000616559 8165 ntTSL 5 BASIC2.67□□□□□ -1.98
CACNA1FO60840 RNU1-91P-201ENST00000364746 163 ntBASIC2.67□□□□□ -1.98
CACNA1FO60840 Y_RNA.326-201ENST00000365176 113 ntBASIC2.67□□□□□ -1.98
CACNA1FO60840 SMIM11P1-201ENST00000369586 178 ntBASIC2.67□□□□□ -1.98
CACNA1FO60840 RNU6-637P-201ENST00000384050 107 ntBASIC2.67□□□□□ -1.98
CACNA1FO60840 RNU2-2P-201ENST00000410396 191 ntBASIC2.67□□□□□ -1.98
CACNA1FO60840 RNU6-712P-201ENST00000410558 100 ntBASIC2.67□□□□□ -1.98
CACNA1FO60840 RNU6-1148P-201ENST00000410992 104 ntBASIC2.67□□□□□ -1.98
CACNA1FO60840 AC023051.1-201ENST00000414098 876 ntTSL 5 BASIC2.67□□□□□ -1.98
CACNA1FO60840 CALM2P2-201ENST00000428512 440 ntBASIC2.67□□□□□ -1.98
CACNA1FO60840 LINC00844-201ENST00000432535 477 ntTSL 2 BASIC2.67□□□□□ -1.98
CACNA1FO60840 UBE2Q2P9-201ENST00000490086 202 ntBASIC2.67□□□□□ -1.98
CACNA1FO60840 AC106892.1-201ENST00000491608 406 ntTSL 3 BASIC2.67□□□□□ -1.98
CACNA1FO60840 LINC01846-201ENST00000505908 651 ntTSL 5 BASIC2.67□□□□□ -1.98
CACNA1FO60840 RNU6-1088P-201ENST00000516850 104 ntBASIC2.67□□□□□ -1.98
CACNA1FO60840 DNAJC8P1-201ENST00000554535 372 ntBASIC2.67□□□□□ -1.98
CACNA1FO60840 PSMA3P-201ENST00000555485 635 ntBASIC2.67□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 131.7 ms