Protein–RNA interactions for Protein: O00370

LINE-1 retrotransposable element ORF2 protein, humanhuman

Predictions only

Length 1,275 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
O00370 TANK-201ENST00000259075 2152 ntAPPRIS P1 TSL 1 (best) BASIC2.59□□□□□ -1.99
O00370 EYS-202ENST00000342421 2168 ntTSL 1 (best) BASIC2.59□□□□□ -1.99
O00370 CCPG1-203ENST00000442196 3453 ntAPPRIS P1 TSL 2 BASIC2.59□□□□□ -1.99
O00370 CFH-202ENST00000367429 4127 ntAPPRIS P1 TSL 1 (best) BASIC2.59□□□□□ -1.99
O00370 XPO4-202ENST00000400602 9884 ntAPPRIS ALT1 TSL 5 BASIC2.59□□□□□ -1.99
O00370 MAPK8-202ENST00000374174 739 ntTSL 3 BASIC2.59□□□□□ -1.99
O00370 RNU6-301P-201ENST00000384277 107 ntBASIC2.59□□□□□ -1.99
O00370 RNU6-166P-201ENST00000384371 107 ntBASIC2.59□□□□□ -1.99
O00370 Y_RNA.481-201ENST00000384373 102 ntBASIC2.59□□□□□ -1.99
O00370 RNU6-45P-201ENST00000384471 107 ntBASIC2.59□□□□□ -1.99
O00370 MIR218-1-201ENST00000384999 110 ntBASIC2.59□□□□□ -1.99
O00370 SNORD70.1-201ENST00000391007 85 ntBASIC2.59□□□□□ -1.99
O00370 SNORD115-47-201ENST00000391226 86 ntBASIC2.59□□□□□ -1.99
O00370 SNORA40C-201ENST00000391285 128 ntBASIC2.59□□□□□ -1.99
O00370 Y_RNA.623-201ENST00000411128 95 ntBASIC2.59□□□□□ -1.99
O00370 AC011243.1-201ENST00000420184 415 ntTSL 3 BASIC2.59□□□□□ -1.99
O00370 MTCYBP5-201ENST00000423752 1135 ntBASIC2.59□□□□□ -1.99
O00370 AC004869.2-201ENST00000436501 229 ntTSL 3 BASIC2.59□□□□□ -1.99
O00370 BRK1P2-201ENST00000442875 223 ntBASIC2.59□□□□□ -1.99
O00370 AC005062.1-201ENST00000457921 566 ntTSL 3 BASIC2.59□□□□□ -1.99
O00370 SCARNA18-201ENST00000459004 134 ntBASIC2.59□□□□□ -1.99
O00370 AC083798.1-201ENST00000472671 131 ntBASIC2.59□□□□□ -1.99
O00370 RN7SL429P-201ENST00000479090 223 ntBASIC2.59□□□□□ -1.99
O00370 RN7SL489P-201ENST00000486185 223 ntBASIC2.59□□□□□ -1.99
O00370 RN7SL327P-201ENST00000488659 223 ntBASIC2.59□□□□□ -1.99
O00370 RNU6-1038P-201ENST00000516516 104 ntBASIC2.59□□□□□ -1.99
O00370 RPL7P20-201ENST00000520308 745 ntBASIC2.59□□□□□ -1.99
O00370 DEUP1-203ENST00000527307 767 ntTSL 3 BASIC2.59□□□□□ -1.99
O00370 NACAP3-201ENST00000552100 481 ntBASIC2.59□□□□□ -1.99
O00370 TPRKBP2-201ENST00000565969 475 ntBASIC2.59□□□□□ -1.99
O00370 MIR3199-1-201ENST00000582434 88 ntBASIC2.59□□□□□ -1.99
O00370 AC073539.2-201ENST00000597113 165 ntBASIC2.59□□□□□ -1.99
O00370 BNIP3P30-201ENST00000601184 574 ntBASIC2.59□□□□□ -1.99
O00370 AC025165.5-201ENST00000602802 578 ntBASIC2.59□□□□□ -1.99
O00370 AC079610.3-201ENST00000606960 147 ntTSL 3 BASIC2.59□□□□□ -1.99
O00370 AC011890.2-201ENST00000613393 294 ntBASIC2.59□□□□□ -1.99
O00370 RN7SL853P-201ENST00000617250 223 ntBASIC2.59□□□□□ -1.99
O00370 uc_338.34-201ENST00000617467 174 ntBASIC2.59□□□□□ -1.99
O00370 USP12-203ENST00000620323 349 ntTSL 3 BASIC2.59□□□□□ -1.99
O00370 AGTPBP1-205ENST00000376083 4208 ntAPPRIS P1 TSL 1 (best) BASIC2.59□□□□□ -1.99
O00370 ANP32E-209ENST00000616917 2989 ntTSL 2 BASIC2.58□□□□□ -2
O00370 EDDM3A-201ENST00000326842 927 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
O00370 MIR412-201ENST00000362142 91 ntBASIC2.58□□□□□ -2
O00370 Y_RNA.6-201ENST00000362350 114 ntBASIC2.58□□□□□ -2
O00370 RNU6-858P-201ENST00000362436 107 ntBASIC2.58□□□□□ -2
O00370 RNU6-1083P-201ENST00000384022 107 ntBASIC2.58□□□□□ -2
O00370 U3.37-201ENST00000408528 213 ntBASIC2.58□□□□□ -2
O00370 RNU6-1328P-201ENST00000410938 106 ntBASIC2.58□□□□□ -2
O00370 AC016831.2-201ENST00000417179 352 ntBASIC2.58□□□□□ -2
O00370 AL355674.1-201ENST00000423681 648 ntTSL 1 (best) BASIC2.58□□□□□ -2
O00370 MYL8P-204ENST00000431574 518 ntBASIC2.58□□□□□ -2
O00370 AL121601.2-201ENST00000438019 707 ntBASIC2.58□□□□□ -2
O00370 LINC00395-202ENST00000451570 415 ntTSL 3 BASIC2.58□□□□□ -2
O00370 AC092567.1-201ENST00000452397 251 ntTSL 3 BASIC2.58□□□□□ -2
O00370 MTATP6P7-201ENST00000453315 681 ntBASIC2.58□□□□□ -2
O00370 LINC02494-201ENST00000509824 427 ntTSL 3 BASIC2.58□□□□□ -2
O00370 AC114781.4-201ENST00000513707 639 ntBASIC2.58□□□□□ -2
O00370 RNU4ATAC8P-201ENST00000516196 109 ntBASIC2.58□□□□□ -2
O00370 AC103957.1-201ENST00000517681 503 ntTSL 3 BASIC2.58□□□□□ -2
O00370 AC087241.2-201ENST00000535801 324 ntBASIC2.58□□□□□ -2
O00370 LINC02398-201ENST00000536666 431 ntTSL 3 BASIC2.58□□□□□ -2
O00370 AC006199.1-201ENST00000548728 219 ntBASIC2.58□□□□□ -2
O00370 AC026470.3-201ENST00000563994 438 ntTSL 3 BASIC2.58□□□□□ -2
O00370 AC007151.1-201ENST00000572774 483 ntBASIC2.58□□□□□ -2
O00370 AP001486.3-201ENST00000615334 372 ntBASIC2.58□□□□□ -2
O00370 uc_338.11-201ENST00000619132 160 ntBASIC2.58□□□□□ -2
O00370 HOTAIRM1_5.1-201ENST00000619311 145 ntBASIC2.58□□□□□ -2
O00370 AC023490.3-201ENST00000621762 358 ntTSL 3 BASIC2.58□□□□□ -2
O00370 YWHAEP7-203ENST00000622054 312 ntBASIC2.58□□□□□ -2
O00370 AP000550.4-201ENST00000639507 358 ntTSL 3 BASIC2.58□□□□□ -2
O00370 RTL4-201ENST00000340433 2613 ntAPPRIS P1 BASIC2.58□□□□□ -2
O00370 ECT2-211ENST00000441497 2825 ntAPPRIS P2 TSL 1 (best) BASIC2.58□□□□□ -2
O00370 AC016717.2-201ENST00000609089 5141 ntBASIC2.57□□□□□ -2
O00370 DEFB107A-201ENST00000335021 389 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
O00370 DEFB107B-201ENST00000355602 389 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
O00370 MIR21-201ENST00000362134 72 ntBASIC2.57□□□□□ -2
O00370 RNU4-66P-201ENST00000365199 138 ntBASIC2.57□□□□□ -2
O00370 EQTN-201ENST00000380031 725 ntAPPRIS ALT2 TSL 1 (best) BASIC2.57□□□□□ -2
O00370 RNU6-393P-201ENST00000384475 107 ntBASIC2.57□□□□□ -2
O00370 SNORA41-201ENST00000384675 132 ntBASIC2.57□□□□□ -2
O00370 MIR181A1-201ENST00000385026 110 ntBASIC2.57□□□□□ -2
O00370 MDM2-210ENST00000393413 657 ntTSL 1 (best) BASIC2.57□□□□□ -2
O00370 RNU6-1068P-201ENST00000410958 103 ntBASIC2.57□□□□□ -2
O00370 MTCO1P20-201ENST00000425366 358 ntBASIC2.57□□□□□ -2
O00370 LINC01707-201ENST00000425517 627 ntTSL 3 BASIC2.57□□□□□ -2
O00370 TIMM9P3-201ENST00000428659 274 ntBASIC2.57□□□□□ -2
O00370 AL157882.1-201ENST00000447148 429 ntTSL 3 BASIC2.57□□□□□ -2
O00370 RNU6-261P-201ENST00000459506 102 ntBASIC2.57□□□□□ -2
O00370 AC092989.1-201ENST00000481235 277 ntBASIC2.57□□□□□ -2
O00370 AC097375.2-201ENST00000510416 579 ntTSL 5 BASIC2.57□□□□□ -2
O00370 AC107222.1-201ENST00000510899 637 ntBASIC2.57□□□□□ -2
O00370 RNU6-703P-201ENST00000516946 107 ntBASIC2.57□□□□□ -2
O00370 MTND1P35-201ENST00000526739 508 ntBASIC2.57□□□□□ -2
O00370 MDM2-233ENST00000545204 398 ntTSL 5 BASIC2.57□□□□□ -2
O00370 AC022960.1-201ENST00000582269 348 ntTSL 3 BASIC2.57□□□□□ -2
O00370 AC113137.1-201ENST00000591869 558 ntTSL 4 BASIC2.57□□□□□ -2
O00370 AC007405.1-203ENST00000623667 932 ntTSL 5 BASIC2.57□□□□□ -2
O00370 AC006355.2-201ENST00000629240 317 ntTSL 3 BASIC2.57□□□□□ -2
O00370 IGHVIII-44-202ENST00000636235 289 ntBASIC2.57□□□□□ -2
O00370 AP3S1-209ENST00000640413 489 ntTSL 5 BASIC2.57□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 138.3 ms