Protein–RNA interactions for Protein: H3BSU7

TMX2-CTNND1, TMX2-CTNND1 readthrough (NMD candidate), humanhuman

Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMX2-CTNND1H3BSU7 OR5AQ1P-201ENST00000527596 927 ntBASIC1.94□□□□□ -2.1
TMX2-CTNND1H3BSU7 AC068587.5-201ENST00000528506 175 ntBASIC1.94□□□□□ -2.1
TMX2-CTNND1H3BSU7 AL391840.1-201ENST00000571144 367 ntBASIC1.94□□□□□ -2.1
TMX2-CTNND1H3BSU7 AC011933.3-201ENST00000578226 372 ntTSL 1 (best) BASIC1.94□□□□□ -2.1
TMX2-CTNND1H3BSU7 AC005357.2-201ENST00000586473 583 ntTSL 2 BASIC1.94□□□□□ -2.1
TMX2-CTNND1H3BSU7 AC098848.2-201ENST00000588023 330 ntBASIC1.94□□□□□ -2.1
TMX2-CTNND1H3BSU7 AC104365.1-201ENST00000588835 394 ntTSL 5 BASIC1.94□□□□□ -2.1
TMX2-CTNND1H3BSU7 C8orf59-207ENST00000611854 563 ntAPPRIS P1 TSL 2 BASIC1.94□□□□□ -2.1
TMX2-CTNND1H3BSU7 AC012409.4-201ENST00000612923 249 ntBASIC1.94□□□□□ -2.1
TMX2-CTNND1H3BSU7 AL161629.2-201ENST00000615347 275 ntBASIC1.94□□□□□ -2.1
TMX2-CTNND1H3BSU7 AC072046.2-201ENST00000618366 268 ntBASIC1.94□□□□□ -2.1
TMX2-CTNND1H3BSU7 AC009161.2-201ENST00000624626 138 ntBASIC1.94□□□□□ -2.1
TMX2-CTNND1H3BSU7 MTND5P26-201ENST00000426018 1752 ntBASIC1.94□□□□□ -2.1
TMX2-CTNND1H3BSU7 CCDC82-202ENST00000423339 1878 ntAPPRIS P2 TSL 1 (best) BASIC1.94□□□□□ -2.1
TMX2-CTNND1H3BSU7 XRCC4-205ENST00000511817 1636 ntAPPRIS P4 TSL 1 (best) BASIC1.94□□□□□ -2.1
TMX2-CTNND1H3BSU7 LINC00836-202ENST00000626230 1640 ntTSL 2 BASIC1.94□□□□□ -2.1
TMX2-CTNND1H3BSU7 MTND5P17-201ENST00000418405 1603 ntBASIC1.93□□□□□ -2.1
TMX2-CTNND1H3BSU7 Y_RNA.559-201ENST00000384686 107 ntBASIC1.93□□□□□ -2.1
TMX2-CTNND1H3BSU7 Y_RNA.576-201ENST00000384781 102 ntBASIC1.93□□□□□ -2.1
TMX2-CTNND1H3BSU7 AC068050.1-201ENST00000394891 380 ntBASIC1.93□□□□□ -2.1
TMX2-CTNND1H3BSU7 FGFR1OP2P1-201ENST00000395943 500 ntBASIC1.93□□□□□ -2.1
TMX2-CTNND1H3BSU7 U3.40-201ENST00000408706 208 ntBASIC1.93□□□□□ -2.1
TMX2-CTNND1H3BSU7 AL109914.1-201ENST00000414740 146 ntTSL 5 BASIC1.93□□□□□ -2.1
TMX2-CTNND1H3BSU7 OR51A5P-201ENST00000415429 942 ntBASIC1.93□□□□□ -2.1
TMX2-CTNND1H3BSU7 AL160162.1-202ENST00000417654 244 ntTSL 3 BASIC1.93□□□□□ -2.1
TMX2-CTNND1H3BSU7 AC083900.1-201ENST00000421964 469 ntTSL 2 BASIC1.93□□□□□ -2.1
TMX2-CTNND1H3BSU7 AC007560.1-201ENST00000426912 237 ntBASIC1.93□□□□□ -2.1
TMX2-CTNND1H3BSU7 AL589986.2-201ENST00000429352 397 ntTSL 2 BASIC1.93□□□□□ -2.1
TMX2-CTNND1H3BSU7 ARPC3P1-201ENST00000437218 533 ntBASIC1.93□□□□□ -2.1
TMX2-CTNND1H3BSU7 IKZF2-209ENST00000442445 551 ntTSL 5 BASIC1.93□□□□□ -2.1
TMX2-CTNND1H3BSU7 AC099566.1-201ENST00000442558 479 ntTSL 3 BASIC1.93□□□□□ -2.1
TMX2-CTNND1H3BSU7 BRK1P2-201ENST00000442875 223 ntBASIC1.93□□□□□ -2.1
TMX2-CTNND1H3BSU7 FABP5P13-201ENST00000452144 328 ntBASIC1.93□□□□□ -2.1
TMX2-CTNND1H3BSU7 AC093899.1-201ENST00000457984 376 ntBASIC1.93□□□□□ -2.1
TMX2-CTNND1H3BSU7 RNU6-953P-201ENST00000459154 107 ntBASIC1.93□□□□□ -2.1
TMX2-CTNND1H3BSU7 AC117462.1-201ENST00000461186 554 ntTSL 4 BASIC1.93□□□□□ -2.1
TMX2-CTNND1H3BSU7 MTCO3P9-201ENST00000506989 781 ntBASIC1.93□□□□□ -2.1
TMX2-CTNND1H3BSU7 AC117522.1-201ENST00000509821 380 ntBASIC1.93□□□□□ -2.1
TMX2-CTNND1H3BSU7 RNU6-123P-201ENST00000516163 102 ntBASIC1.93□□□□□ -2.1
TMX2-CTNND1H3BSU7 AC068880.3-201ENST00000519185 179 ntTSL 5 BASIC1.93□□□□□ -2.1
TMX2-CTNND1H3BSU7 FAM92A1P1-201ENST00000528023 890 ntBASIC1.93□□□□□ -2.1
TMX2-CTNND1H3BSU7 MTCYBP33-201ENST00000575007 1130 ntBASIC1.93□□□□□ -2.1
TMX2-CTNND1H3BSU7 OR1M4P-201ENST00000589199 287 ntBASIC1.93□□□□□ -2.1
TMX2-CTNND1H3BSU7 BNIP3P9-201ENST00000603714 553 ntBASIC1.93□□□□□ -2.1
TMX2-CTNND1H3BSU7 AC091805.2-201ENST00000603848 235 ntBASIC1.93□□□□□ -2.1
TMX2-CTNND1H3BSU7 AL136363.2-201ENST00000604173 851 ntBASIC1.93□□□□□ -2.1
TMX2-CTNND1H3BSU7 AC011939.3-201ENST00000613686 466 ntBASIC1.93□□□□□ -2.1
TMX2-CTNND1H3BSU7 AC138649.3-201ENST00000622154 254 ntBASIC1.93□□□□□ -2.1
TMX2-CTNND1H3BSU7 MTND4P35-201ENST00000604257 1375 ntBASIC1.93□□□□□ -2.1
TMX2-CTNND1H3BSU7 ZGRF1-203ENST00000445203 6529 ntAPPRIS P1 TSL 5 BASIC1.93□□□□□ -2.1
TMX2-CTNND1H3BSU7 CENPCP1-201ENST00000533085 2578 ntBASIC1.93□□□□□ -2.1
TMX2-CTNND1H3BSU7 TECRL-202ENST00000507440 2876 ntTSL 5 BASIC1.92□□□□□ -2.1
TMX2-CTNND1H3BSU7 NACAP2-201ENST00000318548 624 ntBASIC1.92□□□□□ -2.1
TMX2-CTNND1H3BSU7 RNU6-259P-201ENST00000383999 107 ntBASIC1.92□□□□□ -2.1
TMX2-CTNND1H3BSU7 MIR454-201ENST00000390180 115 ntBASIC1.92□□□□□ -2.1
TMX2-CTNND1H3BSU7 RNU6ATAC15P-201ENST00000408279 121 ntBASIC1.92□□□□□ -2.1
TMX2-CTNND1H3BSU7 PPP3R1-202ENST00000409377 684 ntTSL 3 BASIC1.92□□□□□ -2.1
TMX2-CTNND1H3BSU7 RNU2-68P-201ENST00000410878 191 ntBASIC1.92□□□□□ -2.1
TMX2-CTNND1H3BSU7 UBE2V1P10-201ENST00000414685 269 ntBASIC1.92□□□□□ -2.1
TMX2-CTNND1H3BSU7 AC133106.1-201ENST00000419029 397 ntTSL 3 BASIC1.92□□□□□ -2.1
TMX2-CTNND1H3BSU7 AC073311.1-201ENST00000420146 505 ntTSL 5 BASIC1.92□□□□□ -2.1
TMX2-CTNND1H3BSU7 AL445685.2-201ENST00000422551 342 ntBASIC1.92□□□□□ -2.1
TMX2-CTNND1H3BSU7 RPL36AP53-201ENST00000432891 316 ntBASIC1.92□□□□□ -2.1
TMX2-CTNND1H3BSU7 AC025038.1-201ENST00000433249 336 ntTSL 3 BASIC1.92□□□□□ -2.1
TMX2-CTNND1H3BSU7 AC098831.1-201ENST00000440661 216 ntBASIC1.92□□□□□ -2.1
TMX2-CTNND1H3BSU7 MTND4P25-201ENST00000441039 533 ntBASIC1.92□□□□□ -2.1
TMX2-CTNND1H3BSU7 GPM6BP3-201ENST00000442797 145 ntBASIC1.92□□□□□ -2.1
TMX2-CTNND1H3BSU7 MTND1P18-201ENST00000448191 573 ntBASIC1.92□□□□□ -2.1
TMX2-CTNND1H3BSU7 RPS27P26-201ENST00000494583 239 ntBASIC1.92□□□□□ -2.1
TMX2-CTNND1H3BSU7 LAMTOR3P2-201ENST00000504479 232 ntBASIC1.92□□□□□ -2.1
TMX2-CTNND1H3BSU7 SUB1-206ENST00000506237 908 ntAPPRIS P1 TSL 2 BASIC1.92□□□□□ -2.1
TMX2-CTNND1H3BSU7 AC114786.4-201ENST00000508771 728 ntBASIC1.92□□□□□ -2.1
TMX2-CTNND1H3BSU7 RN7SKP298-201ENST00000515950 94 ntBASIC1.92□□□□□ -2.1
TMX2-CTNND1H3BSU7 RNU6ATAC12P-201ENST00000516542 115 ntBASIC1.92□□□□□ -2.1
TMX2-CTNND1H3BSU7 RNU1-40P-201ENST00000516816 164 ntBASIC1.92□□□□□ -2.1
TMX2-CTNND1H3BSU7 RNU1-97P-201ENST00000516872 164 ntBASIC1.92□□□□□ -2.1
TMX2-CTNND1H3BSU7 RNU6-677P-201ENST00000516914 101 ntBASIC1.92□□□□□ -2.1
TMX2-CTNND1H3BSU7 RNU6-410P-201ENST00000517006 107 ntBASIC1.92□□□□□ -2.1
TMX2-CTNND1H3BSU7 RNU6-1315P-201ENST00000517187 99 ntBASIC1.92□□□□□ -2.1
TMX2-CTNND1H3BSU7 AF117829.1-204ENST00000519854 284 ntTSL 3 BASIC1.92□□□□□ -2.1
TMX2-CTNND1H3BSU7 AC021242.2-203ENST00000521842 687 ntTSL 3 BASIC1.92□□□□□ -2.1
TMX2-CTNND1H3BSU7 AP005435.4-201ENST00000529514 284 ntBASIC1.92□□□□□ -2.1
TMX2-CTNND1H3BSU7 AC133480.1-201ENST00000547563 381 ntTSL 3 BASIC1.92□□□□□ -2.1
TMX2-CTNND1H3BSU7 MIR1273C-201ENST00000578669 77 ntBASIC1.92□□□□□ -2.1
TMX2-CTNND1H3BSU7 AC069061.2-202ENST00000580280 357 ntTSL 3 BASIC1.92□□□□□ -2.1
TMX2-CTNND1H3BSU7 AC126118.1-201ENST00000607744 628 ntBASIC1.92□□□□□ -2.1
TMX2-CTNND1H3BSU7 MIR6845-201ENST00000613182 61 ntBASIC1.92□□□□□ -2.1
TMX2-CTNND1H3BSU7 Y_RNA.783-201ENST00000613546 102 ntBASIC1.92□□□□□ -2.1
TMX2-CTNND1H3BSU7 AC244517.12-201ENST00000623581 663 ntBASIC1.92□□□□□ -2.1
TMX2-CTNND1H3BSU7 AC073308.1-201ENST00000623696 305 ntBASIC1.92□□□□□ -2.1
TMX2-CTNND1H3BSU7 AC012640.5-201ENST00000623897 319 ntBASIC1.92□□□□□ -2.1
TMX2-CTNND1H3BSU7 AL157786.1-207ENST00000627771 695 ntBASIC1.92□□□□□ -2.1
TMX2-CTNND1H3BSU7 SRP54-214ENST00000630962 162 ntTSL 5 BASIC1.92□□□□□ -2.1
TMX2-CTNND1H3BSU7 CCSAP-202ENST00000366686 4399 ntTSL 2 BASIC1.91□□□□□ -2.1
TMX2-CTNND1H3BSU7 SPAM1-206ENST00000460182 2154 ntAPPRIS ALT2 TSL 1 (best) BASIC1.91□□□□□ -2.1
TMX2-CTNND1H3BSU7 SI-201ENST00000264382 6011 ntAPPRIS P1 TSL 1 (best) BASIC1.91□□□□□ -2.1
TMX2-CTNND1H3BSU7 RNY1P12-201ENST00000364251 105 ntBASIC1.91□□□□□ -2.1
TMX2-CTNND1H3BSU7 SNORA68.1-201ENST00000364537 132 ntBASIC1.91□□□□□ -2.1
TMX2-CTNND1H3BSU7 TSHB-202ENST00000369517 474 ntAPPRIS P1 TSL 1 (best) BASIC1.91□□□□□ -2.1
TMX2-CTNND1H3BSU7 RNU6-641P-201ENST00000384006 107 ntBASIC1.91□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 90.3 ms