Protein–RNA interactions for Protein: A0A0B4J276

TRAV25, T-cell receptor alpha variable 25 (Fragment), humanhuman

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV25A0A0B4J276 AC087241.4-201ENST00000612441 480 ntBASIC1.53□□□□□ -2.16
TRAV25A0A0B4J276 AC026585.1-201ENST00000619582 524 ntBASIC1.53□□□□□ -2.16
TRAV25A0A0B4J276 FANCD2-213ENST00000625535 117 ntTSL 5 BASIC1.53□□□□□ -2.16
TRAV25A0A0B4J276 AC068733.3-201ENST00000632757 269 ntTSL 3 BASIC1.53□□□□□ -2.16
TRAV25A0A0B4J276 ZNF29P-201ENST00000225587 168 ntBASIC1.52□□□□□ -2.17
TRAV25A0A0B4J276 DEFB114-201ENST00000322066 253 ntAPPRIS P1 TSL 1 (best) BASIC1.52□□□□□ -2.17
TRAV25A0A0B4J276 RNU6-23P-201ENST00000363283 107 ntBASIC1.52□□□□□ -2.17
TRAV25A0A0B4J276 RNU6-160P-201ENST00000384591 107 ntBASIC1.52□□□□□ -2.17
TRAV25A0A0B4J276 TRAJ49-201ENST00000390488 56 ntAPPRIS P1 BASIC1.52□□□□□ -2.17
TRAV25A0A0B4J276 TRAJ23-201ENST00000390514 63 ntAPPRIS P1 BASIC1.52□□□□□ -2.17
TRAV25A0A0B4J276 SNORA48.1-201ENST00000390879 135 ntBASIC1.52□□□□□ -2.17
TRAV25A0A0B4J276 MRPL42P2-201ENST00000403169 426 ntBASIC1.52□□□□□ -2.17
TRAV25A0A0B4J276 AC003985.1-201ENST00000414127 362 ntTSL 3 BASIC1.52□□□□□ -2.17
TRAV25A0A0B4J276 RPL23AP39-201ENST00000415533 405 ntBASIC1.52□□□□□ -2.17
TRAV25A0A0B4J276 TTTY3-201ENST00000417334 344 ntTSL 1 (best) BASIC1.52□□□□□ -2.17
TRAV25A0A0B4J276 LINC01344-201ENST00000420760 261 ntTSL 3 BASIC1.52□□□□□ -2.17
TRAV25A0A0B4J276 RPS15AP10-201ENST00000432472 382 ntBASIC1.52□□□□□ -2.17
TRAV25A0A0B4J276 HMGB1P18-201ENST00000438801 619 ntBASIC1.52□□□□□ -2.17
TRAV25A0A0B4J276 USP9YP15-201ENST00000442391 422 ntBASIC1.52□□□□□ -2.17
TRAV25A0A0B4J276 AL513124.1-201ENST00000450410 614 ntBASIC1.52□□□□□ -2.17
TRAV25A0A0B4J276 FGF14-AS1-202ENST00000451630 321 ntTSL 2 BASIC1.52□□□□□ -2.17
TRAV25A0A0B4J276 HMGN2P23-201ENST00000456759 269 ntBASIC1.52□□□□□ -2.17
TRAV25A0A0B4J276 UBE2V1P12-201ENST00000503954 474 ntBASIC1.52□□□□□ -2.17
TRAV25A0A0B4J276 RNU6-123P-201ENST00000516163 102 ntBASIC1.52□□□□□ -2.17
TRAV25A0A0B4J276 LINC02294-201ENST00000549330 497 ntTSL 2 BASIC1.52□□□□□ -2.17
TRAV25A0A0B4J276 AC011611.2-201ENST00000549888 358 ntTSL 3 BASIC1.52□□□□□ -2.17
TRAV25A0A0B4J276 OR11H5P-201ENST00000554039 926 ntBASIC1.52□□□□□ -2.17
TRAV25A0A0B4J276 ZNF519P3-201ENST00000557158 1032 ntBASIC1.52□□□□□ -2.17
TRAV25A0A0B4J276 AC099850.3-201ENST00000577678 321 ntTSL 3 BASIC1.52□□□□□ -2.17
TRAV25A0A0B4J276 AC078795.2-201ENST00000602835 1252 ntBASIC1.52□□□□□ -2.17
TRAV25A0A0B4J276 AL136363.2-201ENST00000604173 851 ntBASIC1.52□□□□□ -2.17
TRAV25A0A0B4J276 AC010900.2-201ENST00000604508 210 ntBASIC1.52□□□□□ -2.17
TRAV25A0A0B4J276 AC016925.2-201ENST00000605108 242 ntBASIC1.52□□□□□ -2.17
TRAV25A0A0B4J276 AC092106.3-201ENST00000611308 722 ntBASIC1.52□□□□□ -2.17
TRAV25A0A0B4J276 AC130454.1-201ENST00000622948 401 ntBASIC1.52□□□□□ -2.17
TRAV25A0A0B4J276 TTTY3B-201ENST00000631331 344 ntTSL 1 (best) BASIC1.52□□□□□ -2.17
TRAV25A0A0B4J276 OR4G3P-201ENST00000633500 913 ntBASIC1.52□□□□□ -2.17
TRAV25A0A0B4J276 AC242426.3-202ENST00000607149 2397 ntTSL 5 BASIC1.52□□□□□ -2.17
TRAV25A0A0B4J276 XIRP2-201ENST00000295237 5246 ntTSL 2 BASIC1.52□□□□□ -2.17
TRAV25A0A0B4J276 WWP1P1-201ENST00000466609 2769 ntBASIC1.51□□□□□ -2.17
TRAV25A0A0B4J276 RNU4-26P-201ENST00000410270 107 ntBASIC1.51□□□□□ -2.17
TRAV25A0A0B4J276 NCOR1P3-201ENST00000420479 303 ntBASIC1.51□□□□□ -2.17
TRAV25A0A0B4J276 PGBD4P6-201ENST00000421501 610 ntBASIC1.51□□□□□ -2.17
TRAV25A0A0B4J276 AC002386.1-201ENST00000436714 398 ntTSL 2 BASIC1.51□□□□□ -2.17
TRAV25A0A0B4J276 AL591719.1-201ENST00000444669 744 ntBASIC1.51□□□□□ -2.17
TRAV25A0A0B4J276 AL035666.1-201ENST00000446195 348 ntBASIC1.51□□□□□ -2.17
TRAV25A0A0B4J276 AP002075.1-201ENST00000505091 603 ntTSL 3 BASIC1.51□□□□□ -2.17
TRAV25A0A0B4J276 CFAP100-207ENST00000510833 481 ntAPPRIS ALT2 TSL 3 BASIC1.51□□□□□ -2.17
TRAV25A0A0B4J276 RNA5SP182-201ENST00000516064 82 ntBASIC1.51□□□□□ -2.17
TRAV25A0A0B4J276 AC145141.2-201ENST00000518473 501 ntTSL 3 BASIC1.51□□□□□ -2.17
TRAV25A0A0B4J276 AC139497.1-201ENST00000524042 501 ntTSL 5 BASIC1.51□□□□□ -2.17
TRAV25A0A0B4J276 AP000756.1-201ENST00000532606 679 ntTSL 2 BASIC1.51□□□□□ -2.17
TRAV25A0A0B4J276 AC087318.1-201ENST00000536786 389 ntTSL 3 BASIC1.51□□□□□ -2.17
TRAV25A0A0B4J276 DEFB122-202ENST00000569013 197 ntBASIC1.51□□□□□ -2.17
TRAV25A0A0B4J276 MIR5692A1-201ENST00000580523 69 ntBASIC1.51□□□□□ -2.17
TRAV25A0A0B4J276 AC097467.3-208ENST00000593486 670 ntTSL 5 BASIC1.51□□□□□ -2.17
TRAV25A0A0B4J276 AC123912.5-201ENST00000605470 343 ntBASIC1.51□□□□□ -2.17
TRAV25A0A0B4J276 AP000654.2-201ENST00000605633 586 ntBASIC1.51□□□□□ -2.17
TRAV25A0A0B4J276 AL159153.1-201ENST00000619688 317 ntBASIC1.51□□□□□ -2.17
TRAV25A0A0B4J276 ZBBX-205ENST00000455345 3185 ntAPPRIS ALT2 TSL 1 (best) BASIC1.51□□□□□ -2.17
TRAV25A0A0B4J276 CEP57L1-223ENST00000523787 2522 ntAPPRIS ALT2 TSL 5 BASIC1.51□□□□□ -2.17
TRAV25A0A0B4J276 ASPM-202ENST00000367408 3747 ntTSL 1 (best) BASIC1.51□□□□□ -2.17
TRAV25A0A0B4J276 LINC00645-203ENST00000557399 3512 ntTSL 1 (best) BASIC1.5□□□□□ -2.17
TRAV25A0A0B4J276 PPIL4-202ENST00000340881 1089 ntTSL 1 (best) BASIC1.5□□□□□ -2.17
TRAV25A0A0B4J276 RNU6-661P-201ENST00000362409 107 ntBASIC1.5□□□□□ -2.17
TRAV25A0A0B4J276 SNORD114-1-201ENST00000362705 72 ntBASIC1.5□□□□□ -2.17
TRAV25A0A0B4J276 RNU6-660P-201ENST00000364566 109 ntBASIC1.5□□□□□ -2.17
TRAV25A0A0B4J276 TSHB-202ENST00000369517 474 ntAPPRIS P1 TSL 1 (best) BASIC1.5□□□□□ -2.17
TRAV25A0A0B4J276 RNU6-533P-201ENST00000384144 107 ntBASIC1.5□□□□□ -2.17
TRAV25A0A0B4J276 MIR578-201ENST00000384828 96 ntBASIC1.5□□□□□ -2.17
TRAV25A0A0B4J276 AL023284.1-201ENST00000403956 276 ntBASIC1.5□□□□□ -2.17
TRAV25A0A0B4J276 RNA5SP111-201ENST00000411386 101 ntBASIC1.5□□□□□ -2.17
TRAV25A0A0B4J276 RPS20P15-201ENST00000412792 311 ntBASIC1.5□□□□□ -2.17
TRAV25A0A0B4J276 AL109924.3-201ENST00000413324 393 ntTSL 2 BASIC1.5□□□□□ -2.17
TRAV25A0A0B4J276 LINC02238-201ENST00000424953 557 ntTSL 5 BASIC1.5□□□□□ -2.17
TRAV25A0A0B4J276 AL354949.1-201ENST00000446438 170 ntTSL 2 BASIC1.5□□□□□ -2.17
TRAV25A0A0B4J276 AL021397.1-201ENST00000451806 248 ntBASIC1.5□□□□□ -2.17
TRAV25A0A0B4J276 RN7SL274P-201ENST00000492268 272 ntBASIC1.5□□□□□ -2.17
TRAV25A0A0B4J276 RPL38P4-201ENST00000502376 214 ntBASIC1.5□□□□□ -2.17
TRAV25A0A0B4J276 AC116563.1-201ENST00000505454 396 ntTSL 3 BASIC1.5□□□□□ -2.17
TRAV25A0A0B4J276 AC117522.1-201ENST00000509821 380 ntBASIC1.5□□□□□ -2.17
TRAV25A0A0B4J276 RNU6-991P-201ENST00000516168 107 ntBASIC1.5□□□□□ -2.17
TRAV25A0A0B4J276 AC099554.1-201ENST00000520032 572 ntTSL 3 BASIC1.5□□□□□ -2.17
TRAV25A0A0B4J276 AC091944.1-201ENST00000521984 449 ntTSL 3 BASIC1.5□□□□□ -2.17
TRAV25A0A0B4J276 AC107886.1-201ENST00000526935 516 ntTSL 3 BASIC1.5□□□□□ -2.17
TRAV25A0A0B4J276 AC239802.1-201ENST00000531288 406 ntTSL 5 BASIC1.5□□□□□ -2.17
TRAV25A0A0B4J276 TRAV32-201ENST00000553993 340 ntBASIC1.5□□□□□ -2.17
TRAV25A0A0B4J276 AC022469.2-201ENST00000554759 396 ntTSL 5 BASIC1.5□□□□□ -2.17
TRAV25A0A0B4J276 UBE2Q2P8-201ENST00000560644 102 ntBASIC1.5□□□□□ -2.17
TRAV25A0A0B4J276 AC091135.1-201ENST00000585943 307 ntBASIC1.5□□□□□ -2.17
TRAV25A0A0B4J276 AC022022.2-201ENST00000602989 360 ntBASIC1.5□□□□□ -2.17
TRAV25A0A0B4J276 AC063943.3-201ENST00000615562 356 ntBASIC1.5□□□□□ -2.17
TRAV25A0A0B4J276 HOTAIRM1_5.1-201ENST00000619311 145 ntBASIC1.5□□□□□ -2.17
TRAV25A0A0B4J276 MRPL42-202ENST00000393128 1983 ntAPPRIS ALT1 TSL 3 BASIC1.5□□□□□ -2.17
TRAV25A0A0B4J276 KTN1-207ENST00000438792 4449 ntAPPRIS ALT2 TSL 5 BASIC1.49□□□□□ -2.17
TRAV25A0A0B4J276 MIR424-201ENST00000362227 98 ntBASIC1.49□□□□□ -2.17
TRAV25A0A0B4J276 RNU6-384P-201ENST00000364900 104 ntBASIC1.49□□□□□ -2.17
TRAV25A0A0B4J276 RNU6-1200P-201ENST00000384162 107 ntBASIC1.49□□□□□ -2.17
TRAV25A0A0B4J276 AL357139.1-201ENST00000407792 426 ntBASIC1.49□□□□□ -2.17
TRAV25A0A0B4J276 RNU2-39P-201ENST00000410604 198 ntBASIC1.49□□□□□ -2.17
Retrieved 100 of 98,524 protein–RNA pairs in 110.7 ms