Protein–RNA interactions for Protein: Q9Y6K1

DNMT3A, DNA (cytosine-5)-methyltransferase 3A, humanhuman

Predicted RBP Predictions only

Length 912 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3AQ9Y6K1 TNFRSF19-202ENST00000382258 1625 ntAPPRIS P4 TSL 1 (best) BASIC18.63■□□□□ 0.57
DNMT3AQ9Y6K1 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
DNMT3AQ9Y6K1 MRPL3-201ENST00000264995 1706 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
DNMT3AQ9Y6K1 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
DNMT3AQ9Y6K1 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC18.62■□□□□ 0.57
DNMT3AQ9Y6K1 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC18.62■□□□□ 0.57
DNMT3AQ9Y6K1 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
DNMT3AQ9Y6K1 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
DNMT3AQ9Y6K1 AC009133.6-201ENST00000609618 2252 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
DNMT3AQ9Y6K1 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
DNMT3AQ9Y6K1 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
DNMT3AQ9Y6K1 DHRS4L2-202ENST00000397071 1117 ntTSL 2 BASIC18.62■□□□□ 0.57
DNMT3AQ9Y6K1 GXYLT1P6-201ENST00000456472 1187 ntBASIC18.62■□□□□ 0.57
DNMT3AQ9Y6K1 DCTN3-209ENST00000477738 713 ntTSL 3 BASIC18.62■□□□□ 0.57
DNMT3AQ9Y6K1 TMA16-209ENST00000513272 803 ntTSL 2 BASIC18.62■□□□□ 0.57
DNMT3AQ9Y6K1 AC090970.2-201ENST00000561318 865 ntTSL 5 BASIC18.62■□□□□ 0.57
DNMT3AQ9Y6K1 MLF2-202ENST00000435120 1379 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
DNMT3AQ9Y6K1 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
DNMT3AQ9Y6K1 IFNLR1-202ENST00000327575 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
DNMT3AQ9Y6K1 ABCC5-204ENST00000392579 1848 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
DNMT3AQ9Y6K1 MLST8-232ENST00000569417 1870 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
DNMT3AQ9Y6K1 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
DNMT3AQ9Y6K1 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC18.62■□□□□ 0.57
DNMT3AQ9Y6K1 AC087289.5-201ENST00000586076 3175 ntBASIC18.62■□□□□ 0.57
DNMT3AQ9Y6K1 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
DNMT3AQ9Y6K1 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
DNMT3AQ9Y6K1 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC18.61■□□□□ 0.57
DNMT3AQ9Y6K1 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
DNMT3AQ9Y6K1 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC18.61■□□□□ 0.57
DNMT3AQ9Y6K1 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
DNMT3AQ9Y6K1 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
DNMT3AQ9Y6K1 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
DNMT3AQ9Y6K1 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
DNMT3AQ9Y6K1 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC18.61■□□□□ 0.57
DNMT3AQ9Y6K1 PLPP2-201ENST00000269812 1228 ntTSL 3 BASIC18.61■□□□□ 0.57
DNMT3AQ9Y6K1 HMGA1P5-201ENST00000412453 271 ntBASIC18.61■□□□□ 0.57
DNMT3AQ9Y6K1 C20orf166-AS1-202ENST00000436101 761 ntTSL 5 BASIC18.61■□□□□ 0.57
DNMT3AQ9Y6K1 AC098829.1-201ENST00000502344 630 ntTSL 3 BASIC18.61■□□□□ 0.57
DNMT3AQ9Y6K1 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
DNMT3AQ9Y6K1 AL929554.1-201ENST00000568665 460 ntAPPRIS P1 TSL 3 BASIC18.61■□□□□ 0.57
DNMT3AQ9Y6K1 AL512604.3-201ENST00000569583 964 ntBASIC18.61■□□□□ 0.57
DNMT3AQ9Y6K1 AC100793.2-201ENST00000593139 542 ntTSL 5 BASIC18.61■□□□□ 0.57
DNMT3AQ9Y6K1 AC005363.2-201ENST00000618631 242 ntBASIC18.61■□□□□ 0.57
DNMT3AQ9Y6K1 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
DNMT3AQ9Y6K1 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC18.61■□□□□ 0.57
DNMT3AQ9Y6K1 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC18.61■□□□□ 0.57
DNMT3AQ9Y6K1 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
DNMT3AQ9Y6K1 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC18.61■□□□□ 0.57
DNMT3AQ9Y6K1 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC18.61■□□□□ 0.57
DNMT3AQ9Y6K1 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
DNMT3AQ9Y6K1 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC18.61■□□□□ 0.57
DNMT3AQ9Y6K1 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
DNMT3AQ9Y6K1 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
DNMT3AQ9Y6K1 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
DNMT3AQ9Y6K1 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
DNMT3AQ9Y6K1 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
DNMT3AQ9Y6K1 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
DNMT3AQ9Y6K1 SLC25A48-202ENST00000412661 1148 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
DNMT3AQ9Y6K1 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC18.6■□□□□ 0.57
DNMT3AQ9Y6K1 SLC25A48-204ENST00000433282 1111 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
DNMT3AQ9Y6K1 OOEP-AS1-201ENST00000445350 463 ntTSL 3 BASIC18.6■□□□□ 0.57
DNMT3AQ9Y6K1 DUT-205ENST00000558813 769 ntTSL 2 BASIC18.6■□□□□ 0.57
DNMT3AQ9Y6K1 ST20-MTHFS-203ENST00000615374 679 ntAPPRIS P1 TSL 3 BASIC18.6■□□□□ 0.57
DNMT3AQ9Y6K1 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
DNMT3AQ9Y6K1 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
DNMT3AQ9Y6K1 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
DNMT3AQ9Y6K1 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
DNMT3AQ9Y6K1 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
DNMT3AQ9Y6K1 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC18.6■□□□□ 0.57
DNMT3AQ9Y6K1 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
DNMT3AQ9Y6K1 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
DNMT3AQ9Y6K1 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC18.59■□□□□ 0.57
DNMT3AQ9Y6K1 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC18.59■□□□□ 0.57
DNMT3AQ9Y6K1 COLCA2-201ENST00000398035 1414 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
DNMT3AQ9Y6K1 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
DNMT3AQ9Y6K1 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC18.59■□□□□ 0.57
DNMT3AQ9Y6K1 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC18.59■□□□□ 0.57
DNMT3AQ9Y6K1 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
DNMT3AQ9Y6K1 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
DNMT3AQ9Y6K1 CHCHD6-201ENST00000290913 1006 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
DNMT3AQ9Y6K1 INSIG1-202ENST00000342407 1127 ntTSL 2 BASIC18.59■□□□□ 0.57
DNMT3AQ9Y6K1 BUB3-202ENST00000368859 667 ntTSL 3 BASIC18.59■□□□□ 0.57
DNMT3AQ9Y6K1 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC18.59■□□□□ 0.57
DNMT3AQ9Y6K1 PHB2-202ENST00000440277 996 ntTSL 5 BASIC18.59■□□□□ 0.57
DNMT3AQ9Y6K1 HMGB3P22-201ENST00000442010 597 ntTSL 2 BASIC18.59■□□□□ 0.57
DNMT3AQ9Y6K1 ECEL1P2-202ENST00000465689 757 ntBASIC18.59■□□□□ 0.57
DNMT3AQ9Y6K1 OAF-202ENST00000531220 815 ntAPPRIS ALT2 TSL 3 BASIC18.59■□□□□ 0.57
DNMT3AQ9Y6K1 GPX4-207ENST00000589115 812 ntTSL 2 BASIC18.59■□□□□ 0.57
DNMT3AQ9Y6K1 CLDND2-203ENST00000601435 575 ntAPPRIS P1 TSL 3 BASIC18.59■□□□□ 0.57
DNMT3AQ9Y6K1 FP565260.3-205ENST00000620481 816 ntTSL 5 BASIC18.59■□□□□ 0.57
DNMT3AQ9Y6K1 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
DNMT3AQ9Y6K1 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
DNMT3AQ9Y6K1 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
DNMT3AQ9Y6K1 TMEM91-210ENST00000542945 1610 ntTSL 2 BASIC18.59■□□□□ 0.57
DNMT3AQ9Y6K1 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
DNMT3AQ9Y6K1 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
DNMT3AQ9Y6K1 TNFRSF1A-213ENST00000540022 1527 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
DNMT3AQ9Y6K1 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
DNMT3AQ9Y6K1 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.57
DNMT3AQ9Y6K1 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 24.8 ms