Protein–RNA interactions for Protein: Q9Y5I4

PCDHAC2, Protocadherin alpha-C2, humanhuman

Predictions only

Length 1,007 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHAC2Q9Y5I4 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
PCDHAC2Q9Y5I4 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC22.6■■□□□ 1.21
PCDHAC2Q9Y5I4 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC22.6■■□□□ 1.21
PCDHAC2Q9Y5I4 PAQR6-201ENST00000292291 1908 ntAPPRIS P3 TSL 1 (best) BASIC22.6■■□□□ 1.21
PCDHAC2Q9Y5I4 PTPRN2-204ENST00000404321 1374 ntTSL 5 BASIC22.6■■□□□ 1.21
PCDHAC2Q9Y5I4 AGPAT2-205ENST00000538402 1357 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
PCDHAC2Q9Y5I4 KCNMA1-283ENST00000640523 5425 ntAPPRIS ALT2 TSL 5 BASIC22.6■■□□□ 1.21
PCDHAC2Q9Y5I4 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
PCDHAC2Q9Y5I4 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
PCDHAC2Q9Y5I4 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC22.6■■□□□ 1.21
PCDHAC2Q9Y5I4 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
PCDHAC2Q9Y5I4 TP73-202ENST00000354437 2140 ntTSL 5 BASIC22.6■■□□□ 1.21
PCDHAC2Q9Y5I4 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC22.59■■□□□ 1.21
PCDHAC2Q9Y5I4 SPSB3-201ENST00000301717 1449 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
PCDHAC2Q9Y5I4 C6orf136-203ENST00000376473 1402 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
PCDHAC2Q9Y5I4 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
PCDHAC2Q9Y5I4 NAT6-202ENST00000417393 1163 ntAPPRIS ALT2 TSL 1 (best) BASIC22.59■■□□□ 1.21
PCDHAC2Q9Y5I4 BX276092.5-203ENST00000456199 560 ntBASIC22.59■■□□□ 1.21
PCDHAC2Q9Y5I4 NDUFB9-202ENST00000517367 636 ntTSL 3 BASIC22.59■■□□□ 1.21
PCDHAC2Q9Y5I4 AC135586.2-201ENST00000537262 567 ntAPPRIS P1 TSL 4 BASIC22.59■■□□□ 1.21
PCDHAC2Q9Y5I4 MPI-205ENST00000562606 1052 ntTSL 3 BASIC22.59■■□□□ 1.21
PCDHAC2Q9Y5I4 RNF126P1-202ENST00000569893 925 ntBASIC22.59■■□□□ 1.21
PCDHAC2Q9Y5I4 CLDN7-204ENST00000571881 735 ntTSL 3 BASIC22.59■■□□□ 1.21
PCDHAC2Q9Y5I4 ANAPC11-217ENST00000579978 575 ntAPPRIS P1 TSL 2 BASIC22.59■■□□□ 1.21
PCDHAC2Q9Y5I4 SMN2-213ENST00000614240 804 ntAPPRIS ALT2 TSL 5 BASIC22.59■■□□□ 1.21
PCDHAC2Q9Y5I4 BEAN1-211ENST00000622872 1171 ntAPPRIS P2 TSL 5 BASIC22.59■■□□□ 1.21
PCDHAC2Q9Y5I4 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC22.59■■□□□ 1.21
PCDHAC2Q9Y5I4 ZNF655-203ENST00000357864 1370 ntTSL 2 BASIC22.59■■□□□ 1.21
PCDHAC2Q9Y5I4 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC22.59■■□□□ 1.21
PCDHAC2Q9Y5I4 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
PCDHAC2Q9Y5I4 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC22.59■■□□□ 1.21
PCDHAC2Q9Y5I4 PACRGL-203ENST00000444671 1720 ntTSL 2 BASIC22.59■■□□□ 1.21
PCDHAC2Q9Y5I4 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
PCDHAC2Q9Y5I4 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
PCDHAC2Q9Y5I4 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC22.58■■□□□ 1.21
PCDHAC2Q9Y5I4 ASCL5-202ENST00000458416 1420 ntAPPRIS P1 BASIC22.58■■□□□ 1.21
PCDHAC2Q9Y5I4 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC22.58■■□□□ 1.21
PCDHAC2Q9Y5I4 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
PCDHAC2Q9Y5I4 HAAO-201ENST00000294973 1265 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
PCDHAC2Q9Y5I4 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC22.58■■□□□ 1.21
PCDHAC2Q9Y5I4 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC22.58■■□□□ 1.21
PCDHAC2Q9Y5I4 HLA-F-220ENST00000434407 884 ntBASIC22.58■■□□□ 1.21
PCDHAC2Q9Y5I4 LINC02106-201ENST00000506534 606 ntTSL 2 BASIC22.58■■□□□ 1.21
PCDHAC2Q9Y5I4 SNHG15-203ENST00000578968 982 ntTSL 1 (best) BASIC22.58■■□□□ 1.21
PCDHAC2Q9Y5I4 AL121672.3-201ENST00000608644 468 ntBASIC22.58■■□□□ 1.21
PCDHAC2Q9Y5I4 AP000547.2-201ENST00000609641 661 ntTSL 5 BASIC22.58■■□□□ 1.21
PCDHAC2Q9Y5I4 TP53I11-223ENST00000627720 195 ntTSL 5 BASIC22.58■■□□□ 1.21
PCDHAC2Q9Y5I4 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC22.58■■□□□ 1.21
PCDHAC2Q9Y5I4 GLYCTK-201ENST00000305690 1371 ntTSL 5 BASIC22.58■■□□□ 1.21
PCDHAC2Q9Y5I4 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC22.58■■□□□ 1.21
PCDHAC2Q9Y5I4 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC22.58■■□□□ 1.21
PCDHAC2Q9Y5I4 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC22.58■■□□□ 1.2
PCDHAC2Q9Y5I4 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC22.58■■□□□ 1.2
PCDHAC2Q9Y5I4 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC22.58■■□□□ 1.2
PCDHAC2Q9Y5I4 AC125437.2-201ENST00000625180 2167 ntBASIC22.57■■□□□ 1.2
PCDHAC2Q9Y5I4 TRAPPC3-209ENST00000616395 1336 ntTSL 3 BASIC22.57■■□□□ 1.2
PCDHAC2Q9Y5I4 STEAP1B-201ENST00000404369 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC22.57■■□□□ 1.2
PCDHAC2Q9Y5I4 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC22.57■■□□□ 1.2
PCDHAC2Q9Y5I4 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
PCDHAC2Q9Y5I4 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC22.57■■□□□ 1.2
PCDHAC2Q9Y5I4 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC22.57■■□□□ 1.2
PCDHAC2Q9Y5I4 ZNF575-201ENST00000314228 1298 ntAPPRIS P1 TSL 2 BASIC22.57■■□□□ 1.2
PCDHAC2Q9Y5I4 KCNK7-202ENST00000342202 1283 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
PCDHAC2Q9Y5I4 TRAPPC3-202ENST00000373162 1056 ntTSL 2 BASIC22.57■■□□□ 1.2
PCDHAC2Q9Y5I4 RASGRP2-208ENST00000394428 444 ntTSL 2 BASIC22.57■■□□□ 1.2
PCDHAC2Q9Y5I4 SUMF2-203ENST00000395435 1287 ntTSL 2 BASIC22.57■■□□□ 1.2
PCDHAC2Q9Y5I4 AC093901.1-201ENST00000414886 778 ntTSL 5 BASIC22.57■■□□□ 1.2
PCDHAC2Q9Y5I4 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
PCDHAC2Q9Y5I4 NAPSB-203ENST00000531692 561 ntTSL 2 BASIC22.57■■□□□ 1.2
PCDHAC2Q9Y5I4 AC004771.4-201ENST00000576752 474 ntTSL 5 BASIC22.57■■□□□ 1.2
PCDHAC2Q9Y5I4 ZSCAN1-203ENST00000601162 813 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
PCDHAC2Q9Y5I4 IFNL4-202ENST00000616270 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC22.57■■□□□ 1.2
PCDHAC2Q9Y5I4 MIR4300HG-201ENST00000500502 1397 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
PCDHAC2Q9Y5I4 MAP2K5-202ENST00000340972 1491 ntTSL 2 BASIC22.57■■□□□ 1.2
PCDHAC2Q9Y5I4 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
PCDHAC2Q9Y5I4 CYP2D7-201ENST00000358097 1655 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
PCDHAC2Q9Y5I4 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC22.57■■□□□ 1.2
PCDHAC2Q9Y5I4 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
PCDHAC2Q9Y5I4 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC22.57■■□□□ 1.2
PCDHAC2Q9Y5I4 KRT8P3-201ENST00000519669 1449 ntBASIC22.57■■□□□ 1.2
PCDHAC2Q9Y5I4 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
PCDHAC2Q9Y5I4 AL391807.1-203ENST00000604392 2365 ntBASIC22.56■■□□□ 1.2
PCDHAC2Q9Y5I4 SLC35G2-202ENST00000446465 2060 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
PCDHAC2Q9Y5I4 SRP9-203ENST00000366839 1596 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
PCDHAC2Q9Y5I4 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC22.56■■□□□ 1.2
PCDHAC2Q9Y5I4 TEX13A-201ENST00000600991 1377 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
PCDHAC2Q9Y5I4 PVRIG2P-201ENST00000435460 978 ntBASIC22.56■■□□□ 1.2
PCDHAC2Q9Y5I4 AP000347.1-202ENST00000435868 847 ntBASIC22.56■■□□□ 1.2
PCDHAC2Q9Y5I4 AC069368.1-202ENST00000437723 750 ntAPPRIS P1 TSL 5 BASIC22.56■■□□□ 1.2
PCDHAC2Q9Y5I4 AC013402.1-201ENST00000456999 561 ntTSL 4 BASIC22.56■■□□□ 1.2
PCDHAC2Q9Y5I4 STK32A-AS1-201ENST00000504297 863 ntTSL 3 BASIC22.56■■□□□ 1.2
PCDHAC2Q9Y5I4 ABHD17A-204ENST00000590661 1079 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
PCDHAC2Q9Y5I4 AL365255.1-201ENST00000637702 847 ntTSL 2 BASIC22.56■■□□□ 1.2
PCDHAC2Q9Y5I4 MAP3K7CL-206ENST00000399928 1904 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
PCDHAC2Q9Y5I4 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
PCDHAC2Q9Y5I4 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC22.56■■□□□ 1.2
PCDHAC2Q9Y5I4 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC22.56■■□□□ 1.2
PCDHAC2Q9Y5I4 MRAS-204ENST00000464896 1534 ntTSL 2 BASIC22.56■■□□□ 1.2
PCDHAC2Q9Y5I4 CDC14B-202ENST00000375241 5589 ntAPPRIS P2 TSL 1 (best) BASIC22.56■■□□□ 1.2
PCDHAC2Q9Y5I4 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
Retrieved 100 of 98,524 protein–RNA pairs in 24.1 ms