Protein–RNA interactions for Protein: Q9Y3C4

TPRKB, EKC/KEOPS complex subunit TPRKB, humanhuman

Predictions only

Length 175 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPRKBQ9Y3C4 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC17.35■□□□□ 0.37
TPRKBQ9Y3C4 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
TPRKBQ9Y3C4 BRWD1-AS2-201ENST00000603064 1028 ntBASIC17.35■□□□□ 0.37
TPRKBQ9Y3C4 AC100791.3-201ENST00000617619 330 ntBASIC17.35■□□□□ 0.37
TPRKBQ9Y3C4 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC17.35■□□□□ 0.37
TPRKBQ9Y3C4 AL136967.2-201ENST00000623968 743 ntBASIC17.35■□□□□ 0.37
TPRKBQ9Y3C4 REPS1-202ENST00000367663 2607 ntAPPRIS ALT1 TSL 5 BASIC17.35■□□□□ 0.37
TPRKBQ9Y3C4 DTX2-206ENST00000430490 2623 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
TPRKBQ9Y3C4 MARC2-201ENST00000359316 1335 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
TPRKBQ9Y3C4 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
TPRKBQ9Y3C4 TES-201ENST00000358204 2782 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
TPRKBQ9Y3C4 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC17.35■□□□□ 0.37
TPRKBQ9Y3C4 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
TPRKBQ9Y3C4 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
TPRKBQ9Y3C4 OLFM2-203ENST00000590841 1665 ntTSL 2 BASIC17.35■□□□□ 0.37
TPRKBQ9Y3C4 PCGF3-201ENST00000362003 5685 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
TPRKBQ9Y3C4 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC17.35■□□□□ 0.37
TPRKBQ9Y3C4 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
TPRKBQ9Y3C4 CAPN5-205ENST00000529629 2333 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
TPRKBQ9Y3C4 MAGI1-213ENST00000483466 4791 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
TPRKBQ9Y3C4 METTL21A-203ENST00000411432 4805 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
TPRKBQ9Y3C4 FCGBP-203ENST00000620799 4926 ntTSL 5 BASIC17.35■□□□□ 0.37
TPRKBQ9Y3C4 FAM129C-202ENST00000335393 2508 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
TPRKBQ9Y3C4 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
TPRKBQ9Y3C4 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
TPRKBQ9Y3C4 MAPK11-201ENST00000330651 2431 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
TPRKBQ9Y3C4 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
TPRKBQ9Y3C4 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
TPRKBQ9Y3C4 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
TPRKBQ9Y3C4 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
TPRKBQ9Y3C4 RAB32-201ENST00000367495 1217 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
TPRKBQ9Y3C4 MFSD14A-201ENST00000370152 2777 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
TPRKBQ9Y3C4 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
TPRKBQ9Y3C4 BBS5-202ENST00000392663 3107 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
TPRKBQ9Y3C4 PGM5-202ENST00000396396 3338 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
TPRKBQ9Y3C4 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC17.34■□□□□ 0.37
TPRKBQ9Y3C4 KIAA1324L-207ENST00000444627 3527 ntTSL 5 BASIC17.34■□□□□ 0.37
TPRKBQ9Y3C4 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
TPRKBQ9Y3C4 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
TPRKBQ9Y3C4 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
TPRKBQ9Y3C4 AC104417.2-201ENST00000562989 1793 ntBASIC17.34■□□□□ 0.37
TPRKBQ9Y3C4 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
TPRKBQ9Y3C4 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC17.34■□□□□ 0.37
TPRKBQ9Y3C4 C6orf132-201ENST00000341865 6210 ntAPPRIS P2 TSL 5 BASIC17.34■□□□□ 0.37
TPRKBQ9Y3C4 DMRTA2-201ENST00000404795 3137 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
TPRKBQ9Y3C4 FST-202ENST00000396947 2538 ntTSL 5 BASIC17.34■□□□□ 0.37
TPRKBQ9Y3C4 CCDC137-201ENST00000329214 2468 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.37
TPRKBQ9Y3C4 GNA13-201ENST00000439174 4922 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
TPRKBQ9Y3C4 PRSS35-201ENST00000369700 2440 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
TPRKBQ9Y3C4 IL17RC-215ENST00000455057 2244 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
TPRKBQ9Y3C4 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
TPRKBQ9Y3C4 SDCBP-202ENST00000413219 2086 ntAPPRIS P3 TSL 2 BASIC17.33■□□□□ 0.37
TPRKBQ9Y3C4 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
TPRKBQ9Y3C4 GNAS-203ENST00000306120 1878 ntBASIC17.33■□□□□ 0.37
TPRKBQ9Y3C4 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.37
TPRKBQ9Y3C4 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
TPRKBQ9Y3C4 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC17.33■□□□□ 0.37
TPRKBQ9Y3C4 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC17.33■□□□□ 0.37
TPRKBQ9Y3C4 FBXO6-201ENST00000376753 1520 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
TPRKBQ9Y3C4 ARHGEF19-201ENST00000270747 3029 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
TPRKBQ9Y3C4 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
TPRKBQ9Y3C4 HNRNPLL-202ENST00000358367 2779 ntTSL 5 BASIC17.33■□□□□ 0.36
TPRKBQ9Y3C4 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC17.33■□□□□ 0.36
TPRKBQ9Y3C4 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC17.33■□□□□ 0.36
TPRKBQ9Y3C4 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
TPRKBQ9Y3C4 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC17.33■□□□□ 0.36
TPRKBQ9Y3C4 FAM66C-209ENST00000544214 2623 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
TPRKBQ9Y3C4 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
TPRKBQ9Y3C4 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
TPRKBQ9Y3C4 COX20-201ENST00000366528 568 ntTSL 2 BASIC17.33■□□□□ 0.36
TPRKBQ9Y3C4 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC17.33■□□□□ 0.36
TPRKBQ9Y3C4 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
TPRKBQ9Y3C4 AC027612.3-201ENST00000413684 1047 ntBASIC17.33■□□□□ 0.36
TPRKBQ9Y3C4 ATXN7-210ENST00000487717 3683 ntAPPRIS P3 TSL 5 BASIC17.33■□□□□ 0.36
TPRKBQ9Y3C4 PPP1R7-201ENST00000234038 2386 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
TPRKBQ9Y3C4 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
TPRKBQ9Y3C4 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC17.33■□□□□ 0.36
TPRKBQ9Y3C4 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
TPRKBQ9Y3C4 ANKRD18DP-204ENST00000455355 1975 ntBASIC17.33■□□□□ 0.36
TPRKBQ9Y3C4 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
TPRKBQ9Y3C4 TRIM8-201ENST00000302424 2831 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
TPRKBQ9Y3C4 YAP1-209ENST00000537274 5350 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.36
TPRKBQ9Y3C4 OLFM1-201ENST00000252854 2591 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
TPRKBQ9Y3C4 ZNF22-201ENST00000298299 2551 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
TPRKBQ9Y3C4 KMT2E-207ENST00000476671 2523 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
TPRKBQ9Y3C4 DCAF17-211ENST00000539783 5623 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
TPRKBQ9Y3C4 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC17.32■□□□□ 0.36
TPRKBQ9Y3C4 TPD52-211ENST00000519303 1594 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
TPRKBQ9Y3C4 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC17.32■□□□□ 0.36
TPRKBQ9Y3C4 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
TPRKBQ9Y3C4 MYH14-203ENST00000425460 6811 ntAPPRIS P3 TSL 5 BASIC17.32■□□□□ 0.36
TPRKBQ9Y3C4 FBXL5-202ENST00000412094 2837 ntAPPRIS ALT1 TSL 1 (best) BASIC17.32■□□□□ 0.36
TPRKBQ9Y3C4 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
TPRKBQ9Y3C4 SPTBN4-212ENST00000598249 8070 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
TPRKBQ9Y3C4 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
TPRKBQ9Y3C4 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC17.32■□□□□ 0.36
TPRKBQ9Y3C4 ZFP3-201ENST00000318833 5206 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
TPRKBQ9Y3C4 WHAMMP3-203ENST00000621139 4494 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
TPRKBQ9Y3C4 MIF-201ENST00000215754 939 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
TPRKBQ9Y3C4 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 27.2 ms