Protein–RNA interactions for Protein: Q9UPT8

ZC3H4, Zinc finger CCCH domain-containing protein 4, humanhuman

Known RBP Predictions only

Length 1,303 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZC3H4Q9UPT8 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
ZC3H4Q9UPT8 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC22.99■■□□□ 1.27
ZC3H4Q9UPT8 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC22.99■■□□□ 1.27
ZC3H4Q9UPT8 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
ZC3H4Q9UPT8 TFF3-201ENST00000291525 407 ntAPPRIS ALT2 TSL 5 BASIC22.99■■□□□ 1.27
ZC3H4Q9UPT8 CDKN1C-201ENST00000380725 1220 ntAPPRIS ALT2 TSL 2 BASIC22.99■■□□□ 1.27
ZC3H4Q9UPT8 GRM5-203ENST00000393294 1268 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
ZC3H4Q9UPT8 AL445472.1-201ENST00000452532 1007 ntTSL 2 BASIC22.99■■□□□ 1.27
ZC3H4Q9UPT8 AC009567.1-201ENST00000515071 525 ntTSL 4 BASIC22.99■■□□□ 1.27
ZC3H4Q9UPT8 AF238378.1-201ENST00000526806 358 ntBASIC22.99■■□□□ 1.27
ZC3H4Q9UPT8 CMC2-212ENST00000565650 671 ntAPPRIS P1 TSL 2 BASIC22.99■■□□□ 1.27
ZC3H4Q9UPT8 MIR2117HG-201ENST00000588060 506 ntTSL 4 BASIC22.99■■□□□ 1.27
ZC3H4Q9UPT8 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC22.99■■□□□ 1.27
ZC3H4Q9UPT8 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC22.99■■□□□ 1.27
ZC3H4Q9UPT8 FUZ-201ENST00000313777 1675 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
ZC3H4Q9UPT8 GPAT2P1-201ENST00000444924 1672 ntBASIC22.98■■□□□ 1.27
ZC3H4Q9UPT8 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC22.98■■□□□ 1.27
ZC3H4Q9UPT8 Z83836.1-201ENST00000624605 1642 ntBASIC22.98■■□□□ 1.27
ZC3H4Q9UPT8 MYOZ3-203ENST00000517768 1451 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
ZC3H4Q9UPT8 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
ZC3H4Q9UPT8 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC22.98■■□□□ 1.27
ZC3H4Q9UPT8 MRPL43-203ENST00000318364 1010 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
ZC3H4Q9UPT8 PARK7-201ENST00000338639 949 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
ZC3H4Q9UPT8 MRPL43-204ENST00000342071 894 ntTSL 5 BASIC22.98■■□□□ 1.27
ZC3H4Q9UPT8 KRT18P67-201ENST00000432816 1264 ntBASIC22.98■■□□□ 1.27
ZC3H4Q9UPT8 AP001625.2-201ENST00000442605 575 ntTSL 2 BASIC22.98■■□□□ 1.27
ZC3H4Q9UPT8 BOC-211ENST00000484034 1286 ntTSL 1 (best) BASIC22.98■■□□□ 1.27
ZC3H4Q9UPT8 FNDC5-205ENST00000496770 837 ntTSL 1 (best) BASIC22.98■■□□□ 1.27
ZC3H4Q9UPT8 AC021739.5-201ENST00000558637 494 ntTSL 3 BASIC22.98■■□□□ 1.27
ZC3H4Q9UPT8 ABR-217ENST00000572441 563 ntTSL 4 BASIC22.98■■□□□ 1.27
ZC3H4Q9UPT8 AC007220.1-201ENST00000572466 1055 ntTSL 3 BASIC22.98■■□□□ 1.27
ZC3H4Q9UPT8 AC027796.4-201ENST00000575741 874 ntTSL 5 BASIC22.98■■□□□ 1.27
ZC3H4Q9UPT8 MIR3180-5-201ENST00000583743 153 ntBASIC22.98■■□□□ 1.27
ZC3H4Q9UPT8 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
ZC3H4Q9UPT8 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC22.98■■□□□ 1.27
ZC3H4Q9UPT8 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC22.98■■□□□ 1.27
ZC3H4Q9UPT8 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
ZC3H4Q9UPT8 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC22.97■■□□□ 1.27
ZC3H4Q9UPT8 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
ZC3H4Q9UPT8 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC22.97■■□□□ 1.27
ZC3H4Q9UPT8 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC22.97■■□□□ 1.27
ZC3H4Q9UPT8 MPIG6B-202ENST00000375805 668 ntAPPRIS ALT2 TSL 1 (best) BASIC22.97■■□□□ 1.27
ZC3H4Q9UPT8 AL031284.1-201ENST00000419297 478 ntBASIC22.97■■□□□ 1.27
ZC3H4Q9UPT8 HCG15-203ENST00000438190 1032 ntTSL 3 BASIC22.97■■□□□ 1.27
ZC3H4Q9UPT8 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC22.97■■□□□ 1.27
ZC3H4Q9UPT8 NDUFB9-204ENST00000518008 789 ntTSL 2 BASIC22.97■■□□□ 1.27
ZC3H4Q9UPT8 TMEM220-AS1-201ENST00000579114 575 ntTSL 4 BASIC22.97■■□□□ 1.27
ZC3H4Q9UPT8 AC008735.1-201ENST00000592252 802 ntTSL 5 BASIC22.97■■□□□ 1.27
ZC3H4Q9UPT8 LINC02084-201ENST00000606069 1096 ntBASIC22.97■■□□□ 1.27
ZC3H4Q9UPT8 PTPN11-207ENST00000639857 801 ntTSL 5 BASIC22.97■■□□□ 1.27
ZC3H4Q9UPT8 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
ZC3H4Q9UPT8 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
ZC3H4Q9UPT8 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC22.97■■□□□ 1.27
ZC3H4Q9UPT8 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC22.97■■□□□ 1.27
ZC3H4Q9UPT8 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
ZC3H4Q9UPT8 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
ZC3H4Q9UPT8 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC22.97■■□□□ 1.27
ZC3H4Q9UPT8 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC22.97■■□□□ 1.27
ZC3H4Q9UPT8 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC22.96■■□□□ 1.27
ZC3H4Q9UPT8 UBC-206ENST00000538617 1303 ntTSL 5 BASIC22.96■■□□□ 1.27
ZC3H4Q9UPT8 LAT-204ENST00000395461 1448 ntAPPRIS ALT2 TSL 1 (best) BASIC22.96■■□□□ 1.27
ZC3H4Q9UPT8 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC22.96■■□□□ 1.27
ZC3H4Q9UPT8 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC22.96■■□□□ 1.27
ZC3H4Q9UPT8 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC22.96■■□□□ 1.27
ZC3H4Q9UPT8 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC22.96■■□□□ 1.27
ZC3H4Q9UPT8 DNASE1L2-202ENST00000382437 1222 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
ZC3H4Q9UPT8 PTTG1-202ENST00000393964 1070 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
ZC3H4Q9UPT8 FABP5-202ENST00000396359 986 ntTSL 5 BASIC22.96■■□□□ 1.27
ZC3H4Q9UPT8 ANKRD54-202ENST00000406423 954 ntTSL 3 BASIC22.96■■□□□ 1.27
ZC3H4Q9UPT8 UBXN10-AS1-201ENST00000442226 510 ntTSL 2 BASIC22.96■■□□□ 1.27
ZC3H4Q9UPT8 POLD2P1-201ENST00000511220 997 ntBASIC22.96■■□□□ 1.27
ZC3H4Q9UPT8 AP002770.1-201ENST00000540547 428 ntTSL 4 BASIC22.96■■□□□ 1.27
ZC3H4Q9UPT8 HOXA11-AS1_5.1-201ENST00000620211 203 ntBASIC22.96■■□□□ 1.27
ZC3H4Q9UPT8 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
ZC3H4Q9UPT8 CYP2D7-203ENST00000433992 1740 ntTSL 1 (best) BASIC22.96■■□□□ 1.27
ZC3H4Q9UPT8 CYP2D7-207ENST00000612115 1734 ntAPPRIS P1 TSL 5 BASIC22.96■■□□□ 1.27
ZC3H4Q9UPT8 ZNF655-203ENST00000357864 1370 ntTSL 2 BASIC22.96■■□□□ 1.27
ZC3H4Q9UPT8 AGPAT2-201ENST00000371694 1391 ntTSL 1 (best) BASIC22.96■■□□□ 1.27
ZC3H4Q9UPT8 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
ZC3H4Q9UPT8 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC22.96■■□□□ 1.27
ZC3H4Q9UPT8 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC22.96■■□□□ 1.27
ZC3H4Q9UPT8 PABPC1L-204ENST00000255136 2129 ntAPPRIS P1 TSL 5 BASIC22.96■■□□□ 1.27
ZC3H4Q9UPT8 GRIN2D-201ENST00000263269 5093 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.27
ZC3H4Q9UPT8 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC22.95■■□□□ 1.27
ZC3H4Q9UPT8 JMJD7-201ENST00000397299 1416 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.27
ZC3H4Q9UPT8 CXorf40B-205ENST00000462691 1440 ntAPPRIS ALT1 TSL 3 BASIC22.95■■□□□ 1.27
ZC3H4Q9UPT8 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC22.95■■□□□ 1.26
ZC3H4Q9UPT8 BDKRB1-202ENST00000553356 1526 ntTSL 1 (best) BASIC22.95■■□□□ 1.26
ZC3H4Q9UPT8 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC22.95■■□□□ 1.26
ZC3H4Q9UPT8 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
ZC3H4Q9UPT8 POU4F3-201ENST00000230732 1182 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
ZC3H4Q9UPT8 RAMP1-201ENST00000254661 910 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
ZC3H4Q9UPT8 NPFFR2-202ENST00000344413 1234 ntTSL 1 (best) BASIC22.95■■□□□ 1.26
ZC3H4Q9UPT8 EDN3-203ENST00000371025 1153 ntAPPRIS ALT2 TSL 1 (best) BASIC22.95■■□□□ 1.26
ZC3H4Q9UPT8 DRAP1-202ENST00000376991 819 ntTSL 5 BASIC22.95■■□□□ 1.26
ZC3H4Q9UPT8 CHMP3-203ENST00000409225 1099 ntTSL 2 BASIC22.95■■□□□ 1.26
ZC3H4Q9UPT8 AC093909.1-201ENST00000504731 1122 ntBASIC22.95■■□□□ 1.26
ZC3H4Q9UPT8 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC22.95■■□□□ 1.26
ZC3H4Q9UPT8 AC015961.2-201ENST00000589281 701 ntTSL 3 BASIC22.95■■□□□ 1.26
ZC3H4Q9UPT8 TERC-201ENST00000602385 541 ntBASIC22.95■■□□□ 1.26
Retrieved 100 of 98,524 protein–RNA pairs in 32.3 ms