Protein–RNA interactions for Protein: Q9UBC3

DNMT3B, DNA (cytosine-5)-methyltransferase 3B, humanhuman

Known RBP Predictions only

Length 853 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3BQ9UBC3 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
DNMT3BQ9UBC3 FBXW9-203ENST00000587955 1437 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
DNMT3BQ9UBC3 RNF113B-201ENST00000267291 1376 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
DNMT3BQ9UBC3 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
DNMT3BQ9UBC3 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC19.83■□□□□ 0.77
DNMT3BQ9UBC3 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC19.83■□□□□ 0.77
DNMT3BQ9UBC3 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
DNMT3BQ9UBC3 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC19.83■□□□□ 0.77
DNMT3BQ9UBC3 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
DNMT3BQ9UBC3 AGAP2-AS1-201ENST00000542466 1500 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
DNMT3BQ9UBC3 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC19.83■□□□□ 0.77
DNMT3BQ9UBC3 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC19.83■□□□□ 0.77
DNMT3BQ9UBC3 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
DNMT3BQ9UBC3 AL450487.1-201ENST00000426799 995 ntBASIC19.83■□□□□ 0.77
DNMT3BQ9UBC3 AC092597.1-201ENST00000487352 616 ntBASIC19.83■□□□□ 0.77
DNMT3BQ9UBC3 AP003396.3-201ENST00000530918 778 ntTSL 5 BASIC19.83■□□□□ 0.77
DNMT3BQ9UBC3 AC011773.3-202ENST00000549291 790 ntTSL 3 BASIC19.83■□□□□ 0.77
DNMT3BQ9UBC3 NDUFV2-AS1-203ENST00000608008 779 ntBASIC19.83■□□□□ 0.77
DNMT3BQ9UBC3 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC19.83■□□□□ 0.76
DNMT3BQ9UBC3 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
DNMT3BQ9UBC3 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC19.83■□□□□ 0.76
DNMT3BQ9UBC3 SYT8-202ENST00000381968 1424 ntAPPRIS P2 TSL 5 BASIC19.83■□□□□ 0.76
DNMT3BQ9UBC3 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
DNMT3BQ9UBC3 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC19.83■□□□□ 0.76
DNMT3BQ9UBC3 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
DNMT3BQ9UBC3 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC19.83■□□□□ 0.76
DNMT3BQ9UBC3 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.76
DNMT3BQ9UBC3 JAKMIP1-208ENST00000637373 1362 ntTSL 5 BASIC19.83■□□□□ 0.76
DNMT3BQ9UBC3 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
DNMT3BQ9UBC3 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
DNMT3BQ9UBC3 RFXANK-205ENST00000456252 1325 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
DNMT3BQ9UBC3 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
DNMT3BQ9UBC3 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC19.82■□□□□ 0.76
DNMT3BQ9UBC3 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC19.82■□□□□ 0.76
DNMT3BQ9UBC3 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC19.82■□□□□ 0.76
DNMT3BQ9UBC3 GOLGA6L5P-202ENST00000515341 1828 ntBASIC19.82■□□□□ 0.76
DNMT3BQ9UBC3 AL023284.2-201ENST00000405850 579 ntBASIC19.82■□□□□ 0.76
DNMT3BQ9UBC3 PLPP5-202ENST00000422581 853 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
DNMT3BQ9UBC3 AGBL5-AS1-201ENST00000444217 407 ntTSL 5 BASIC19.82■□□□□ 0.76
DNMT3BQ9UBC3 RASA4DP-201ENST00000460726 1199 ntBASIC19.82■□□□□ 0.76
DNMT3BQ9UBC3 IFI27L1-206ENST00000554562 571 ntTSL 3 BASIC19.82■□□□□ 0.76
DNMT3BQ9UBC3 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC19.82■□□□□ 0.76
DNMT3BQ9UBC3 AC007952.6-201ENST00000573168 2673 ntBASIC19.82■□□□□ 0.76
DNMT3BQ9UBC3 AC003957.1-201ENST00000625108 2673 ntBASIC19.82■□□□□ 0.76
DNMT3BQ9UBC3 KLHDC4-227ENST00000622456 1422 ntTSL 5 BASIC19.82■□□□□ 0.76
DNMT3BQ9UBC3 CADPS-219ENST00000612439 5455 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
DNMT3BQ9UBC3 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
DNMT3BQ9UBC3 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC19.82■□□□□ 0.76
DNMT3BQ9UBC3 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC19.82■□□□□ 0.76
DNMT3BQ9UBC3 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC19.82■□□□□ 0.76
DNMT3BQ9UBC3 AC140125.2-201ENST00000502515 1517 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
DNMT3BQ9UBC3 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
DNMT3BQ9UBC3 GJA8-201ENST00000369235 1302 ntAPPRIS P1 BASIC19.81■□□□□ 0.76
DNMT3BQ9UBC3 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC19.81■□□□□ 0.76
DNMT3BQ9UBC3 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC19.81■□□□□ 0.76
DNMT3BQ9UBC3 C20orf196-201ENST00000303142 1154 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
DNMT3BQ9UBC3 RPA2-201ENST00000313433 1237 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
DNMT3BQ9UBC3 CHTOP-202ENST00000368687 1094 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
DNMT3BQ9UBC3 TBC1D7-205ENST00000379307 1084 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
DNMT3BQ9UBC3 ATP5G2P1-201ENST00000433580 426 ntBASIC19.81■□□□□ 0.76
DNMT3BQ9UBC3 AC024243.1-201ENST00000609234 778 ntBASIC19.81■□□□□ 0.76
DNMT3BQ9UBC3 PRDX3-201ENST00000298510 1591 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
DNMT3BQ9UBC3 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC19.81■□□□□ 0.76
DNMT3BQ9UBC3 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC19.81■□□□□ 0.76
DNMT3BQ9UBC3 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC19.81■□□□□ 0.76
DNMT3BQ9UBC3 PNKP-224ENST00000631020 1545 ntTSL 5 BASIC19.81■□□□□ 0.76
DNMT3BQ9UBC3 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
DNMT3BQ9UBC3 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
DNMT3BQ9UBC3 GAS2L1P1-201ENST00000420145 1480 ntBASIC19.8■□□□□ 0.76
DNMT3BQ9UBC3 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC19.8■□□□□ 0.76
DNMT3BQ9UBC3 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
DNMT3BQ9UBC3 AC125437.2-201ENST00000625180 2167 ntBASIC19.8■□□□□ 0.76
DNMT3BQ9UBC3 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
DNMT3BQ9UBC3 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
DNMT3BQ9UBC3 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC19.8■□□□□ 0.76
DNMT3BQ9UBC3 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
DNMT3BQ9UBC3 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
DNMT3BQ9UBC3 OR10H5-201ENST00000308940 1132 ntAPPRIS P1 BASIC19.8■□□□□ 0.76
DNMT3BQ9UBC3 PDCD2L-203ENST00000587065 492 ntTSL 3 BASIC19.8■□□□□ 0.76
DNMT3BQ9UBC3 NTF4-201ENST00000593537 932 ntAPPRIS P1 BASIC19.8■□□□□ 0.76
DNMT3BQ9UBC3 GPX4-210ENST00000611653 793 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
DNMT3BQ9UBC3 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
DNMT3BQ9UBC3 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC19.79■□□□□ 0.76
DNMT3BQ9UBC3 ZACN-201ENST00000334586 1335 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
DNMT3BQ9UBC3 NTMT1-203ENST00000372483 1315 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
DNMT3BQ9UBC3 AC036111.1-201ENST00000533973 1582 ntBASIC19.79■□□□□ 0.76
DNMT3BQ9UBC3 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
DNMT3BQ9UBC3 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
DNMT3BQ9UBC3 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
DNMT3BQ9UBC3 ZFAND2A-201ENST00000316495 860 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
DNMT3BQ9UBC3 ZFAND2A-203ENST00000401903 968 ntTSL 3 BASIC19.79■□□□□ 0.76
DNMT3BQ9UBC3 DECR2-202ENST00000424398 1012 ntTSL 5 BASIC19.79■□□□□ 0.76
DNMT3BQ9UBC3 ZNF534-205ENST00000617900 1085 ntTSL 2 BASIC19.79■□□□□ 0.76
DNMT3BQ9UBC3 BCL10-202ENST00000620248 774 ntTSL 5 BASIC19.79■□□□□ 0.76
DNMT3BQ9UBC3 AC012313.10-201ENST00000623509 926 ntBASIC19.79■□□□□ 0.76
DNMT3BQ9UBC3 DNAJB6-218ENST00000634080 1005 ntTSL 2 BASIC19.79■□□□□ 0.76
DNMT3BQ9UBC3 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC19.79■□□□□ 0.76
DNMT3BQ9UBC3 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
DNMT3BQ9UBC3 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
DNMT3BQ9UBC3 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 28.2 ms