Protein–RNA interactions for Protein: Q9NZP6

NPAP1, Nuclear pore-associated protein 1, humanhuman

Predictions only

Length 1,156 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAP1Q9NZP6 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC17.28■□□□□ 0.36
NPAP1Q9NZP6 MTMR1-208ENST00000445323 4516 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
NPAP1Q9NZP6 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
NPAP1Q9NZP6 SLC1A5-205ENST00000594991 2031 ntTSL 2 BASIC17.28■□□□□ 0.36
NPAP1Q9NZP6 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
NPAP1Q9NZP6 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC17.28■□□□□ 0.36
NPAP1Q9NZP6 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC17.28■□□□□ 0.36
NPAP1Q9NZP6 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC17.28■□□□□ 0.36
NPAP1Q9NZP6 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
NPAP1Q9NZP6 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
NPAP1Q9NZP6 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC17.28■□□□□ 0.36
NPAP1Q9NZP6 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC17.28■□□□□ 0.36
NPAP1Q9NZP6 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC17.28■□□□□ 0.36
NPAP1Q9NZP6 RBCK1-213ENST00000475269 1200 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
NPAP1Q9NZP6 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC17.28■□□□□ 0.36
NPAP1Q9NZP6 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC17.28■□□□□ 0.36
NPAP1Q9NZP6 REXO2-216ENST00000544196 452 ntTSL 3 BASIC17.28■□□□□ 0.36
NPAP1Q9NZP6 AC090877.2-202ENST00000560363 574 ntTSL 2 BASIC17.28■□□□□ 0.36
NPAP1Q9NZP6 FLT3LG-211ENST00000600429 984 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
NPAP1Q9NZP6 ICA1-201ENST00000265577 2309 ntAPPRIS ALT1 TSL 5 BASIC17.28■□□□□ 0.36
NPAP1Q9NZP6 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
NPAP1Q9NZP6 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC17.28■□□□□ 0.36
NPAP1Q9NZP6 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
NPAP1Q9NZP6 CPT2-207ENST00000636867 2643 ntTSL 5 BASIC17.28■□□□□ 0.36
NPAP1Q9NZP6 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
NPAP1Q9NZP6 SEPT11-201ENST00000264893 5593 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
NPAP1Q9NZP6 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
NPAP1Q9NZP6 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
NPAP1Q9NZP6 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
NPAP1Q9NZP6 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
NPAP1Q9NZP6 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
NPAP1Q9NZP6 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC17.27■□□□□ 0.36
NPAP1Q9NZP6 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
NPAP1Q9NZP6 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
NPAP1Q9NZP6 LANCL3-201ENST00000378619 3063 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
NPAP1Q9NZP6 ZNF302-214ENST00000613363 2893 ntAPPRIS ALT2 TSL 4 BASIC17.27■□□□□ 0.36
NPAP1Q9NZP6 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
NPAP1Q9NZP6 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC17.27■□□□□ 0.36
NPAP1Q9NZP6 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.36
NPAP1Q9NZP6 C19orf84-202ENST00000574814 1318 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.36
NPAP1Q9NZP6 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
NPAP1Q9NZP6 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC17.27■□□□□ 0.36
NPAP1Q9NZP6 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
NPAP1Q9NZP6 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
NPAP1Q9NZP6 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
NPAP1Q9NZP6 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
NPAP1Q9NZP6 SIVA1-201ENST00000329967 802 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.36
NPAP1Q9NZP6 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
NPAP1Q9NZP6 HGNC:18790-208ENST00000506380 798 ntAPPRIS P1 TSL 3 BASIC17.27■□□□□ 0.36
NPAP1Q9NZP6 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC17.27■□□□□ 0.36
NPAP1Q9NZP6 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC17.27■□□□□ 0.36
NPAP1Q9NZP6 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
NPAP1Q9NZP6 GABBR1-204ENST00000377016 4299 ntTSL 5 BASIC17.27■□□□□ 0.35
NPAP1Q9NZP6 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
NPAP1Q9NZP6 TSGA10IP-203ENST00000532620 1925 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
NPAP1Q9NZP6 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.35
NPAP1Q9NZP6 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC17.27■□□□□ 0.35
NPAP1Q9NZP6 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
NPAP1Q9NZP6 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.35
NPAP1Q9NZP6 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC17.26■□□□□ 0.35
NPAP1Q9NZP6 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC17.26■□□□□ 0.35
NPAP1Q9NZP6 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC17.26■□□□□ 0.35
NPAP1Q9NZP6 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC17.26■□□□□ 0.35
NPAP1Q9NZP6 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
NPAP1Q9NZP6 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC17.26■□□□□ 0.35
NPAP1Q9NZP6 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
NPAP1Q9NZP6 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
NPAP1Q9NZP6 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
NPAP1Q9NZP6 NBPF21P-201ENST00000425093 1451 ntBASIC17.26■□□□□ 0.35
NPAP1Q9NZP6 ZSCAN18-201ENST00000240727 2779 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
NPAP1Q9NZP6 STX6-204ENST00000542060 4809 ntTSL 2 BASIC17.26■□□□□ 0.35
NPAP1Q9NZP6 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
NPAP1Q9NZP6 IMMP2L-201ENST00000331762 1205 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
NPAP1Q9NZP6 PLPP7-201ENST00000372261 972 ntTSL 2 BASIC17.26■□□□□ 0.35
NPAP1Q9NZP6 MDFI-202ENST00000373050 809 ntTSL 2 BASIC17.26■□□□□ 0.35
NPAP1Q9NZP6 RPS2P55-201ENST00000397318 883 ntBASIC17.26■□□□□ 0.35
NPAP1Q9NZP6 TSPAN4-209ENST00000409543 1031 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
NPAP1Q9NZP6 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC17.26■□□□□ 0.35
NPAP1Q9NZP6 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC17.26■□□□□ 0.35
NPAP1Q9NZP6 SNORA78-201ENST00000459373 127 ntBASIC17.26■□□□□ 0.35
NPAP1Q9NZP6 AC107956.1-201ENST00000494359 873 ntBASIC17.26■□□□□ 0.35
NPAP1Q9NZP6 F2R-202ENST00000505600 442 ntTSL 2 BASIC17.26■□□□□ 0.35
NPAP1Q9NZP6 AC097641.1-201ENST00000580671 588 ntTSL 4 BASIC17.26■□□□□ 0.35
NPAP1Q9NZP6 UBALD1-209ENST00000591897 1275 ntTSL 2 BASIC17.26■□□□□ 0.35
NPAP1Q9NZP6 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
NPAP1Q9NZP6 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
NPAP1Q9NZP6 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
NPAP1Q9NZP6 GLDN-201ENST00000335449 4971 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
NPAP1Q9NZP6 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
NPAP1Q9NZP6 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
NPAP1Q9NZP6 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
NPAP1Q9NZP6 PRMT2-203ENST00000355680 2688 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
NPAP1Q9NZP6 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
NPAP1Q9NZP6 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC17.25■□□□□ 0.35
NPAP1Q9NZP6 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
NPAP1Q9NZP6 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
NPAP1Q9NZP6 AL354751.1-201ENST00000412768 1863 ntBASIC17.25■□□□□ 0.35
NPAP1Q9NZP6 ARNTL-205ENST00000403510 2745 ntTSL 2 BASIC17.25■□□□□ 0.35
NPAP1Q9NZP6 DTWD1-202ENST00000403028 1584 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
NPAP1Q9NZP6 MAPK11-201ENST00000330651 2431 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 52.7 ms