Protein–RNA interactions for Protein: Q9NRR8

CDC42SE1, CDC42 small effector protein 1, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1Q9NRR8 MPPE1-211ENST00000588072 4236 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
CDC42SE1Q9NRR8 ZNF302-202ENST00000446502 2635 ntAPPRIS ALT2 TSL 2 BASIC9.78□□□□□ -0.84
CDC42SE1Q9NRR8 RASL10B-201ENST00000603017 3205 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
CDC42SE1Q9NRR8 ACAN-202ENST00000439576 8840 ntAPPRIS P2 TSL 5 BASIC9.78□□□□□ -0.84
CDC42SE1Q9NRR8 COL7A1-201ENST00000328333 9276 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
CDC42SE1Q9NRR8 MRPL4-201ENST00000253099 1455 ntAPPRIS P2 TSL 1 (best) BASIC9.78□□□□□ -0.84
CDC42SE1Q9NRR8 AL022069.1-201ENST00000568025 1636 ntBASIC9.78□□□□□ -0.84
CDC42SE1Q9NRR8 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC9.78□□□□□ -0.84
CDC42SE1Q9NRR8 CLEC18C-201ENST00000314151 1934 ntAPPRIS P2 TSL 1 (best) BASIC9.78□□□□□ -0.84
CDC42SE1Q9NRR8 CLEC18A-208ENST00000568461 1934 ntAPPRIS P2 TSL 1 (best) BASIC9.78□□□□□ -0.84
CDC42SE1Q9NRR8 TXNRD2-214ENST00000491939 2238 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
CDC42SE1Q9NRR8 PPP6R1-203ENST00000587283 2953 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
CDC42SE1Q9NRR8 PSD-201ENST00000020673 4183 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
CDC42SE1Q9NRR8 ATP2B1-AS1-201ENST00000605386 3632 ntBASIC9.77□□□□□ -0.84
CDC42SE1Q9NRR8 ERLEC1-201ENST00000185150 2433 ntAPPRIS P3 TSL 1 (best) BASIC9.77□□□□□ -0.84
CDC42SE1Q9NRR8 PRPF31-203ENST00000419967 2269 ntTSL 5 BASIC9.77□□□□□ -0.84
CDC42SE1Q9NRR8 ABHD16A-201ENST00000395952 2103 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.84
CDC42SE1Q9NRR8 NR1H2-201ENST00000253727 1998 ntAPPRIS P2 TSL 1 (best) BASIC9.77□□□□□ -0.84
CDC42SE1Q9NRR8 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.84
CDC42SE1Q9NRR8 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC9.77□□□□□ -0.84
CDC42SE1Q9NRR8 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.84
CDC42SE1Q9NRR8 NORAD-201ENST00000565493 5339 ntBASIC9.77□□□□□ -0.84
CDC42SE1Q9NRR8 TNS2-201ENST00000314250 5010 ntAPPRIS ALT2 TSL 1 (best) BASIC9.77□□□□□ -0.84
CDC42SE1Q9NRR8 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC9.77□□□□□ -0.84
CDC42SE1Q9NRR8 COL11A2-201ENST00000341947 6425 ntAPPRIS ALT2 TSL 5 BASIC9.77□□□□□ -0.84
CDC42SE1Q9NRR8 SYNC-202ENST00000409190 3398 ntAPPRIS P3 TSL 2 BASIC9.77□□□□□ -0.84
CDC42SE1Q9NRR8 RASA4-204ENST00000462172 2634 ntTSL 1 (best) BASIC9.77□□□□□ -0.85
CDC42SE1Q9NRR8 PPIL2-212ENST00000626352 2625 ntTSL 1 (best) BASIC9.77□□□□□ -0.85
CDC42SE1Q9NRR8 STK32C-204ENST00000368622 2010 ntTSL 1 (best) BASIC9.77□□□□□ -0.85
CDC42SE1Q9NRR8 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC9.77□□□□□ -0.85
CDC42SE1Q9NRR8 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC9.77□□□□□ -0.85
CDC42SE1Q9NRR8 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC9.77□□□□□ -0.85
CDC42SE1Q9NRR8 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
CDC42SE1Q9NRR8 PLD3-201ENST00000356508 1906 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
CDC42SE1Q9NRR8 TBC1D10B-201ENST00000409939 3350 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
CDC42SE1Q9NRR8 TBC1D30-203ENST00000539867 2594 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
CDC42SE1Q9NRR8 AIFM2-204ENST00000613322 3247 ntAPPRIS P1 TSL 5 BASIC9.77□□□□□ -0.85
CDC42SE1Q9NRR8 F7-201ENST00000346342 2409 ntAPPRIS ALT2 TSL 1 (best) BASIC9.77□□□□□ -0.85
CDC42SE1Q9NRR8 ZNF385A-203ENST00000394313 2430 ntTSL 1 (best) BASIC9.77□□□□□ -0.85
CDC42SE1Q9NRR8 FOXP1-218ENST00000498215 2400 ntAPPRIS P3 TSL 2 BASIC9.77□□□□□ -0.85
CDC42SE1Q9NRR8 NLRX1-202ENST00000409109 4092 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
CDC42SE1Q9NRR8 SDK1-210ENST00000615806 10258 ntAPPRIS ALT2 TSL 5 BASIC9.77□□□□□ -0.85
CDC42SE1Q9NRR8 IFNGR1-201ENST00000367739 2139 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
CDC42SE1Q9NRR8 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC9.77□□□□□ -0.85
CDC42SE1Q9NRR8 FMO5-201ENST00000254090 2632 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
CDC42SE1Q9NRR8 MASTL-203ENST00000375946 3623 ntAPPRIS P3 TSL 1 (best) BASIC9.77□□□□□ -0.85
CDC42SE1Q9NRR8 HIPK3-201ENST00000303296 7408 ntTSL 5 BASIC9.77□□□□□ -0.85
CDC42SE1Q9NRR8 DKFZP434K028-202ENST00000536405 2466 ntTSL 1 (best) BASIC9.77□□□□□ -0.85
CDC42SE1Q9NRR8 TLE3-205ENST00000539550 2464 ntTSL 2 BASIC9.77□□□□□ -0.85
CDC42SE1Q9NRR8 CNST-203ENST00000366513 5126 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
CDC42SE1Q9NRR8 ACTN2-207ENST00000546208 5103 ntTSL 1 (best) BASIC9.77□□□□□ -0.85
CDC42SE1Q9NRR8 FICD-204ENST00000552695 3347 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
CDC42SE1Q9NRR8 AFF3-202ENST00000409236 9849 ntAPPRIS ALT2 TSL 5 BASIC9.77□□□□□ -0.85
CDC42SE1Q9NRR8 ARVCF-204ENST00000406522 2682 ntTSL 5 BASIC9.77□□□□□ -0.85
CDC42SE1Q9NRR8 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC9.77□□□□□ -0.85
CDC42SE1Q9NRR8 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC9.77□□□□□ -0.85
CDC42SE1Q9NRR8 AL359710.1-201ENST00000427039 1544 ntTSL 2 BASIC9.77□□□□□ -0.85
CDC42SE1Q9NRR8 PRSS16-201ENST00000230582 2716 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
CDC42SE1Q9NRR8 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC9.76□□□□□ -0.85
CDC42SE1Q9NRR8 MINDY2-203ENST00000559228 9238 ntAPPRIS P3 TSL 2 BASIC9.76□□□□□ -0.85
CDC42SE1Q9NRR8 AC020659.1-201ENST00000309874 2900 ntTSL 2 BASIC9.76□□□□□ -0.85
CDC42SE1Q9NRR8 RNF182-206ENST00000537388 3274 ntAPPRIS P1 TSL 2 BASIC9.76□□□□□ -0.85
CDC42SE1Q9NRR8 ANKMY1-203ENST00000373318 2449 ntTSL 1 (best) BASIC9.76□□□□□ -0.85
CDC42SE1Q9NRR8 PLEKHN1-203ENST00000379410 2404 ntAPPRIS P3 TSL 1 (best) BASIC9.76□□□□□ -0.85
CDC42SE1Q9NRR8 GCM2-201ENST00000379491 2441 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
CDC42SE1Q9NRR8 PPP3CA-201ENST00000323055 4519 ntTSL 1 (best) BASIC9.76□□□□□ -0.85
CDC42SE1Q9NRR8 WDR81-206ENST00000446363 2968 ntTSL 1 (best) BASIC9.76□□□□□ -0.85
CDC42SE1Q9NRR8 SLIT1-201ENST00000266058 7925 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
CDC42SE1Q9NRR8 ATP5F1-202ENST00000369722 3156 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
CDC42SE1Q9NRR8 CA10-203ENST00000451037 3189 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
CDC42SE1Q9NRR8 MFGE8-202ENST00000268151 1752 ntTSL 1 (best) BASIC9.76□□□□□ -0.85
CDC42SE1Q9NRR8 IRF2BP2-202ENST00000366610 4615 ntAPPRIS ALT2 TSL 1 (best) BASIC9.76□□□□□ -0.85
CDC42SE1Q9NRR8 C5orf30-201ENST00000319933 3049 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
CDC42SE1Q9NRR8 TSSC2-204ENST00000529482 2337 ntTSL 2 BASIC9.76□□□□□ -0.85
CDC42SE1Q9NRR8 NFIA-205ENST00000371189 1989 ntTSL 2 BASIC9.76□□□□□ -0.85
CDC42SE1Q9NRR8 WDR25-202ENST00000402312 1969 ntAPPRIS P1 TSL 2 BASIC9.76□□□□□ -0.85
CDC42SE1Q9NRR8 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC9.76□□□□□ -0.85
CDC42SE1Q9NRR8 TNKS-211ENST00000520408 1964 ntTSL 2 BASIC9.76□□□□□ -0.85
CDC42SE1Q9NRR8 MAPT-204ENST00000344290 6816 ntAPPRIS ALT2 TSL 1 (best) BASIC9.76□□□□□ -0.85
CDC42SE1Q9NRR8 PTPN13-203ENST00000427191 8487 ntAPPRIS ALT2 TSL 1 (best) BASIC9.76□□□□□ -0.85
CDC42SE1Q9NRR8 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
CDC42SE1Q9NRR8 PNCK-204ENST00000370150 1612 ntAPPRIS P1 TSL 5 BASIC9.76□□□□□ -0.85
CDC42SE1Q9NRR8 ANKRD6-201ENST00000339746 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC9.76□□□□□ -0.85
CDC42SE1Q9NRR8 SBF1P1-201ENST00000444527 5631 ntBASIC9.76□□□□□ -0.85
CDC42SE1Q9NRR8 DYNLL1-208ENST00000550178 581 ntBASIC9.76□□□□□ -0.85
CDC42SE1Q9NRR8 AC008738.5-201ENST00000587312 482 ntTSL 3 BASIC9.76□□□□□ -0.85
CDC42SE1Q9NRR8 CARD9-202ENST00000371734 1814 ntTSL 5 BASIC9.76□□□□□ -0.85
CDC42SE1Q9NRR8 AC132872.2-201ENST00000581303 2368 ntTSL 5 BASIC9.76□□□□□ -0.85
CDC42SE1Q9NRR8 WT1-201ENST00000332351 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC9.76□□□□□ -0.85
CDC42SE1Q9NRR8 MAZ-208ENST00000563402 1461 ntTSL 5 BASIC9.76□□□□□ -0.85
CDC42SE1Q9NRR8 MAZ-210ENST00000566906 1455 ntTSL 5 BASIC9.76□□□□□ -0.85
CDC42SE1Q9NRR8 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC9.76□□□□□ -0.85
CDC42SE1Q9NRR8 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC9.76□□□□□ -0.85
CDC42SE1Q9NRR8 SSTR2-201ENST00000357585 7683 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
CDC42SE1Q9NRR8 STARD7-201ENST00000337288 3368 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
CDC42SE1Q9NRR8 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
CDC42SE1Q9NRR8 PRPS1-204ENST00000372435 2073 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
CDC42SE1Q9NRR8 GPSM2-201ENST00000264126 3032 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
CDC42SE1Q9NRR8 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC9.76□□□□□ -0.85
CDC42SE1Q9NRR8 HDAC11-214ENST00000446613 2875 ntTSL 5 BASIC9.76□□□□□ -0.85
Retrieved 100 of 98,524 protein–RNA pairs in 24.7 ms