Protein–RNA interactions for Protein: Q9NR96

TLR9, Toll-like receptor 9, humanhuman

Predictions only

Length 1,032 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TLR9Q9NR96 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
TLR9Q9NR96 JAKMIP1-208ENST00000637373 1362 ntTSL 5 BASIC20.14■□□□□ 0.81
TLR9Q9NR96 PPIH-202ENST00000372549 327 ntTSL 3 BASIC20.14■□□□□ 0.81
TLR9Q9NR96 AL845331.1-201ENST00000424978 1190 ntBASIC20.14■□□□□ 0.81
TLR9Q9NR96 AC068134.1-202ENST00000439072 356 ntTSL 5 BASIC20.14■□□□□ 0.81
TLR9Q9NR96 MYD88-206ENST00000443433 914 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
TLR9Q9NR96 SELENOH-204ENST00000534355 818 ntAPPRIS P2 TSL 1 (best) BASIC20.14■□□□□ 0.81
TLR9Q9NR96 KCNE1B-204ENST00000623803 811 ntAPPRIS P2 TSL 1 (best) BASIC20.14■□□□□ 0.81
TLR9Q9NR96 AL732314.6-201ENST00000627721 484 ntTSL 4 BASIC20.14■□□□□ 0.81
TLR9Q9NR96 AL365255.1-201ENST00000637702 847 ntTSL 2 BASIC20.14■□□□□ 0.81
TLR9Q9NR96 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC20.14■□□□□ 0.81
TLR9Q9NR96 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC20.14■□□□□ 0.81
TLR9Q9NR96 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
TLR9Q9NR96 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC20.14■□□□□ 0.81
TLR9Q9NR96 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
TLR9Q9NR96 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC20.13■□□□□ 0.81
TLR9Q9NR96 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
TLR9Q9NR96 BCL11A-209ENST00000489516 1508 ntTSL 5 BASIC20.13■□□□□ 0.81
TLR9Q9NR96 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
TLR9Q9NR96 MAP2K5-202ENST00000340972 1491 ntTSL 2 BASIC20.13■□□□□ 0.81
TLR9Q9NR96 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC20.13■□□□□ 0.81
TLR9Q9NR96 AMACR-205ENST00000426255 1316 ntTSL 2 BASIC20.13■□□□□ 0.81
TLR9Q9NR96 SRRM2-AS1-203ENST00000571305 1344 ntTSL 2 BASIC20.13■□□□□ 0.81
TLR9Q9NR96 PKD1P6-201ENST00000343738 4769 ntBASIC20.13■□□□□ 0.81
TLR9Q9NR96 ZNF575-201ENST00000314228 1298 ntAPPRIS P1 TSL 2 BASIC20.13■□□□□ 0.81
TLR9Q9NR96 HOPX-201ENST00000317745 1129 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
TLR9Q9NR96 AP002383.4-201ENST00000442518 975 ntBASIC20.13■□□□□ 0.81
TLR9Q9NR96 ZSCAN1-203ENST00000601162 813 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
TLR9Q9NR96 AP000547.2-201ENST00000609641 661 ntTSL 5 BASIC20.13■□□□□ 0.81
TLR9Q9NR96 TP53I11-223ENST00000627720 195 ntTSL 5 BASIC20.13■□□□□ 0.81
TLR9Q9NR96 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
TLR9Q9NR96 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC20.13■□□□□ 0.81
TLR9Q9NR96 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
TLR9Q9NR96 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
TLR9Q9NR96 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
TLR9Q9NR96 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC20.13■□□□□ 0.81
TLR9Q9NR96 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC20.12■□□□□ 0.81
TLR9Q9NR96 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC20.12■□□□□ 0.81
TLR9Q9NR96 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC20.12■□□□□ 0.81
TLR9Q9NR96 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC20.12■□□□□ 0.81
TLR9Q9NR96 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
TLR9Q9NR96 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
TLR9Q9NR96 FAM50A-202ENST00000393600 1352 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
TLR9Q9NR96 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC20.12■□□□□ 0.81
TLR9Q9NR96 GTPBP8-208ENST00000619116 1378 ntTSL 5 BASIC20.12■□□□□ 0.81
TLR9Q9NR96 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC20.12■□□□□ 0.81
TLR9Q9NR96 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
TLR9Q9NR96 AURKAIP1-202ENST00000338338 1047 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
TLR9Q9NR96 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC20.12■□□□□ 0.81
TLR9Q9NR96 HMGN1-203ENST00000380748 829 ntTSL 3 BASIC20.12■□□□□ 0.81
TLR9Q9NR96 AL023284.2-201ENST00000405850 579 ntBASIC20.12■□□□□ 0.81
TLR9Q9NR96 GRAMD4P1-201ENST00000435181 1110 ntBASIC20.12■□□□□ 0.81
TLR9Q9NR96 AP000347.1-202ENST00000435868 847 ntBASIC20.12■□□□□ 0.81
TLR9Q9NR96 FDX1P1-201ENST00000449115 551 ntBASIC20.12■□□□□ 0.81
TLR9Q9NR96 RPL28-210ENST00000560583 1204 ntTSL 2 BASIC20.12■□□□□ 0.81
TLR9Q9NR96 CLDN7-204ENST00000571881 735 ntTSL 3 BASIC20.12■□□□□ 0.81
TLR9Q9NR96 TNNT1-204ENST00000585321 995 ntAPPRIS ALT2 TSL 5 BASIC20.12■□□□□ 0.81
TLR9Q9NR96 AP002414.4-201ENST00000589764 1148 ntBASIC20.12■□□□□ 0.81
TLR9Q9NR96 DHRS4L2-211ENST00000621761 1049 ntTSL 5 BASIC20.12■□□□□ 0.81
TLR9Q9NR96 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC20.12■□□□□ 0.81
TLR9Q9NR96 AL162377.1-201ENST00000618844 1793 ntBASIC20.12■□□□□ 0.81
TLR9Q9NR96 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
TLR9Q9NR96 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
TLR9Q9NR96 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
TLR9Q9NR96 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC20.12■□□□□ 0.81
TLR9Q9NR96 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
TLR9Q9NR96 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
TLR9Q9NR96 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC20.12■□□□□ 0.81
TLR9Q9NR96 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
TLR9Q9NR96 EMX1-202ENST00000394111 1528 ntTSL 3 BASIC20.12■□□□□ 0.81
TLR9Q9NR96 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC20.12■□□□□ 0.81
TLR9Q9NR96 CHID1-203ENST00000436108 1477 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
TLR9Q9NR96 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
TLR9Q9NR96 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
TLR9Q9NR96 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC20.11■□□□□ 0.81
TLR9Q9NR96 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
TLR9Q9NR96 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC20.11■□□□□ 0.81
TLR9Q9NR96 PFN1-201ENST00000225655 1291 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
TLR9Q9NR96 FUOM-201ENST00000278025 709 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
TLR9Q9NR96 GGT1-208ENST00000404920 657 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
TLR9Q9NR96 FAAHP1-202ENST00000446499 1238 ntBASIC20.11■□□□□ 0.81
TLR9Q9NR96 GGTLC2-203ENST00000480559 657 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
TLR9Q9NR96 ACY1-210ENST00000494103 1298 ntTSL 3 BASIC20.11■□□□□ 0.81
TLR9Q9NR96 NDUFB9-202ENST00000517367 636 ntTSL 3 BASIC20.11■□□□□ 0.81
TLR9Q9NR96 KRT8P26-201ENST00000534154 1276 ntBASIC20.11■□□□□ 0.81
TLR9Q9NR96 MIR3180-5-201ENST00000583743 153 ntBASIC20.11■□□□□ 0.81
TLR9Q9NR96 ANKRD29-202ENST00000585908 846 ntTSL 2 BASIC20.11■□□□□ 0.81
TLR9Q9NR96 AC008567.3-202ENST00000619671 859 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
TLR9Q9NR96 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC20.11■□□□□ 0.81
TLR9Q9NR96 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC20.11■□□□□ 0.81
TLR9Q9NR96 AL162741.1-201ENST00000565563 1558 ntBASIC20.11■□□□□ 0.81
TLR9Q9NR96 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC20.11■□□□□ 0.81
TLR9Q9NR96 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC20.11■□□□□ 0.81
TLR9Q9NR96 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC20.11■□□□□ 0.81
TLR9Q9NR96 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC20.1■□□□□ 0.81
TLR9Q9NR96 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC20.1■□□□□ 0.81
TLR9Q9NR96 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC20.1■□□□□ 0.81
TLR9Q9NR96 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC20.1■□□□□ 0.81
TLR9Q9NR96 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC20.1■□□□□ 0.81
TLR9Q9NR96 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 62.8 ms