Protein–RNA interactions for Protein: Q9H788

SH2D4A, SH2 domain-containing protein 4A, humanhuman

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH2D4AQ9H788 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC22.14■■□□□ 1.13
SH2D4AQ9H788 GOLGA6L5P-202ENST00000515341 1828 ntBASIC22.14■■□□□ 1.13
SH2D4AQ9H788 PCDHAC2-203ENST00000615316 3011 ntBASIC22.14■■□□□ 1.13
SH2D4AQ9H788 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
SH2D4AQ9H788 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
SH2D4AQ9H788 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
SH2D4AQ9H788 GOSR2-210ENST00000576910 1891 ntAPPRIS ALT1 TSL 5 BASIC22.13■■□□□ 1.13
SH2D4AQ9H788 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC22.13■■□□□ 1.13
SH2D4AQ9H788 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
SH2D4AQ9H788 TBC1D7-201ENST00000343141 1027 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
SH2D4AQ9H788 ILF2-202ENST00000368681 726 ntTSL 2 BASIC22.13■■□□□ 1.13
SH2D4AQ9H788 UPK3BP1-201ENST00000428678 509 ntBASIC22.13■■□□□ 1.13
SH2D4AQ9H788 DAP-202ENST00000432074 1048 ntTSL 2 BASIC22.13■■□□□ 1.13
SH2D4AQ9H788 FOSL1-203ENST00000531493 1200 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
SH2D4AQ9H788 L34079.3-201ENST00000600242 546 ntTSL 4 BASIC22.13■■□□□ 1.13
SH2D4AQ9H788 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC22.13■■□□□ 1.13
SH2D4AQ9H788 PCCB-216ENST00000483687 1727 ntTSL 3 BASIC22.13■■□□□ 1.13
SH2D4AQ9H788 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
SH2D4AQ9H788 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
SH2D4AQ9H788 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
SH2D4AQ9H788 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
SH2D4AQ9H788 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
SH2D4AQ9H788 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC22.13■■□□□ 1.13
SH2D4AQ9H788 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC22.13■■□□□ 1.13
SH2D4AQ9H788 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC22.12■■□□□ 1.13
SH2D4AQ9H788 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC22.12■■□□□ 1.13
SH2D4AQ9H788 FKBP8-206ENST00000596558 1756 ntAPPRIS ALT1 TSL 2 BASIC22.12■■□□□ 1.13
SH2D4AQ9H788 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC22.12■■□□□ 1.13
SH2D4AQ9H788 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
SH2D4AQ9H788 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
SH2D4AQ9H788 AC007952.6-201ENST00000573168 2673 ntBASIC22.12■■□□□ 1.13
SH2D4AQ9H788 AC003957.1-201ENST00000625108 2673 ntBASIC22.12■■□□□ 1.13
SH2D4AQ9H788 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC22.12■■□□□ 1.13
SH2D4AQ9H788 OGG1-201ENST00000302003 1655 ntAPPRIS P4 TSL 1 (best) BASIC22.12■■□□□ 1.13
SH2D4AQ9H788 CRYZL1-203ENST00000381540 1482 ntTSL 2 BASIC22.12■■□□□ 1.13
SH2D4AQ9H788 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC22.12■■□□□ 1.13
SH2D4AQ9H788 STARD4-203ENST00000502322 1467 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
SH2D4AQ9H788 FAM86B2-202ENST00000309608 806 ntTSL 3 BASIC22.12■■□□□ 1.13
SH2D4AQ9H788 SURF4-206ENST00000485435 1206 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
SH2D4AQ9H788 CD320-202ENST00000537716 1119 ntTSL 2 BASIC22.12■■□□□ 1.13
SH2D4AQ9H788 RAP1B-229ENST00000543393 874 ntTSL 3 BASIC22.12■■□□□ 1.13
SH2D4AQ9H788 AC239803.1-201ENST00000594189 1278 ntTSL 5 BASIC22.12■■□□□ 1.13
SH2D4AQ9H788 KLK7-206ENST00000597707 1054 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
SH2D4AQ9H788 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
SH2D4AQ9H788 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
SH2D4AQ9H788 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC22.12■■□□□ 1.13
SH2D4AQ9H788 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC22.12■■□□□ 1.13
SH2D4AQ9H788 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC22.12■■□□□ 1.13
SH2D4AQ9H788 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
SH2D4AQ9H788 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC22.11■■□□□ 1.13
SH2D4AQ9H788 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC22.11■■□□□ 1.13
SH2D4AQ9H788 Z82202.1-201ENST00000623446 1880 ntBASIC22.11■■□□□ 1.13
SH2D4AQ9H788 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC22.11■■□□□ 1.13
SH2D4AQ9H788 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
SH2D4AQ9H788 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC22.11■■□□□ 1.13
SH2D4AQ9H788 CYB561-205ENST00000542042 1302 ntTSL 2 BASIC22.11■■□□□ 1.13
SH2D4AQ9H788 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC22.11■■□□□ 1.13
SH2D4AQ9H788 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
SH2D4AQ9H788 NR1H2-202ENST00000411902 1466 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
SH2D4AQ9H788 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC22.11■■□□□ 1.13
SH2D4AQ9H788 COMTD1-201ENST00000372538 976 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
SH2D4AQ9H788 STARP1-201ENST00000397973 869 ntBASIC22.11■■□□□ 1.13
SH2D4AQ9H788 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC22.11■■□□□ 1.13
SH2D4AQ9H788 SNX5-210ENST00000481323 562 ntTSL 3 BASIC22.11■■□□□ 1.13
SH2D4AQ9H788 EHMT1-211ENST00000482340 691 ntTSL 5 BASIC22.11■■□□□ 1.13
SH2D4AQ9H788 AC021739.3-201ENST00000557908 855 ntTSL 2 BASIC22.11■■□□□ 1.13
SH2D4AQ9H788 GCSHP2-201ENST00000560971 527 ntBASIC22.11■■□□□ 1.13
SH2D4AQ9H788 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC22.11■■□□□ 1.13
SH2D4AQ9H788 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC22.11■■□□□ 1.13
SH2D4AQ9H788 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC22.11■■□□□ 1.13
SH2D4AQ9H788 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC22.11■■□□□ 1.13
SH2D4AQ9H788 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
SH2D4AQ9H788 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC22.11■■□□□ 1.13
SH2D4AQ9H788 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC22.11■■□□□ 1.13
SH2D4AQ9H788 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
SH2D4AQ9H788 TAX1BP3-201ENST00000225525 1377 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
SH2D4AQ9H788 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC22.11■■□□□ 1.13
SH2D4AQ9H788 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
SH2D4AQ9H788 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
SH2D4AQ9H788 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC22.1■■□□□ 1.13
SH2D4AQ9H788 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
SH2D4AQ9H788 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC22.1■■□□□ 1.13
SH2D4AQ9H788 GUCA1B-201ENST00000230361 1113 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
SH2D4AQ9H788 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
SH2D4AQ9H788 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
SH2D4AQ9H788 KRTAP5-10-201ENST00000398531 1176 ntAPPRIS P1 BASIC22.1■■□□□ 1.13
SH2D4AQ9H788 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC22.1■■□□□ 1.13
SH2D4AQ9H788 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
SH2D4AQ9H788 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC22.1■■□□□ 1.13
SH2D4AQ9H788 KRT8P3-201ENST00000519669 1449 ntBASIC22.1■■□□□ 1.13
SH2D4AQ9H788 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC22.1■■□□□ 1.13
SH2D4AQ9H788 EEF1D-243ENST00000532400 419 ntTSL 3 BASIC22.1■■□□□ 1.13
SH2D4AQ9H788 WIPI1-202ENST00000546360 1575 ntTSL 2 BASIC22.1■■□□□ 1.13
SH2D4AQ9H788 AC132938.3-201ENST00000579095 357 ntTSL 2 BASIC22.1■■□□□ 1.13
SH2D4AQ9H788 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC22.1■■□□□ 1.13
SH2D4AQ9H788 AC064834.1-201ENST00000606986 503 ntTSL 3 BASIC22.1■■□□□ 1.13
SH2D4AQ9H788 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC22.1■■□□□ 1.13
SH2D4AQ9H788 GPAT2P1-201ENST00000444924 1672 ntBASIC22.1■■□□□ 1.13
SH2D4AQ9H788 CRELD2-201ENST00000328268 1357 ntAPPRIS P3 TSL 1 (best) BASIC22.1■■□□□ 1.13
SH2D4AQ9H788 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC22.09■■□□□ 1.13
Retrieved 100 of 98,524 protein–RNA pairs in 26.6 ms