Protein–RNA interactions for Protein: Q9H4D5

NXF3, Nuclear RNA export factor 3, humanhuman

Known RBP Predictions only

Length 531 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NXF3Q9H4D5 TPD52-211ENST00000519303 1594 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
NXF3Q9H4D5 AC036111.1-201ENST00000533973 1582 ntBASIC20.54■□□□□ 0.88
NXF3Q9H4D5 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC20.54■□□□□ 0.88
NXF3Q9H4D5 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC20.53■□□□□ 0.88
NXF3Q9H4D5 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
NXF3Q9H4D5 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
NXF3Q9H4D5 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
NXF3Q9H4D5 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC20.53■□□□□ 0.88
NXF3Q9H4D5 LCE4A-202ENST00000368777 672 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
NXF3Q9H4D5 KRTAP5-10-201ENST00000398531 1176 ntAPPRIS P1 BASIC20.53■□□□□ 0.88
NXF3Q9H4D5 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC20.53■□□□□ 0.88
NXF3Q9H4D5 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
NXF3Q9H4D5 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
NXF3Q9H4D5 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
NXF3Q9H4D5 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC20.53■□□□□ 0.88
NXF3Q9H4D5 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC20.53■□□□□ 0.88
NXF3Q9H4D5 KRT8P3-201ENST00000519669 1449 ntBASIC20.53■□□□□ 0.88
NXF3Q9H4D5 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
NXF3Q9H4D5 NDUFB9-206ENST00000522532 1319 ntTSL 2 BASIC20.53■□□□□ 0.88
NXF3Q9H4D5 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC20.52■□□□□ 0.88
NXF3Q9H4D5 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
NXF3Q9H4D5 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC20.52■□□□□ 0.88
NXF3Q9H4D5 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC20.52■□□□□ 0.88
NXF3Q9H4D5 AL031133.1-201ENST00000406807 723 ntBASIC20.52■□□□□ 0.88
NXF3Q9H4D5 AC114763.1-202ENST00000414911 867 ntTSL 3 BASIC20.52■□□□□ 0.88
NXF3Q9H4D5 KRT18P38-201ENST00000449496 1282 ntBASIC20.52■□□□□ 0.88
NXF3Q9H4D5 EHMT1-211ENST00000482340 691 ntTSL 5 BASIC20.52■□□□□ 0.88
NXF3Q9H4D5 AZIN1-AS1-214ENST00000522850 473 ntTSL 3 BASIC20.52■□□□□ 0.88
NXF3Q9H4D5 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
NXF3Q9H4D5 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC20.52■□□□□ 0.88
NXF3Q9H4D5 AC004448.5-201ENST00000579897 567 ntTSL 5 BASIC20.52■□□□□ 0.88
NXF3Q9H4D5 NEK4P2-201ENST00000580004 1012 ntBASIC20.52■□□□□ 0.88
NXF3Q9H4D5 NUDT16L1-203ENST00000586252 922 ntTSL 3 BASIC20.52■□□□□ 0.88
NXF3Q9H4D5 AC007952.6-201ENST00000573168 2673 ntBASIC20.52■□□□□ 0.88
NXF3Q9H4D5 AC003957.1-201ENST00000625108 2673 ntBASIC20.52■□□□□ 0.88
NXF3Q9H4D5 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC20.52■□□□□ 0.87
NXF3Q9H4D5 RPS6KB1-204ENST00000443572 1913 ntTSL 2 BASIC20.51■□□□□ 0.87
NXF3Q9H4D5 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
NXF3Q9H4D5 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC20.51■□□□□ 0.87
NXF3Q9H4D5 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
NXF3Q9H4D5 PBXIP1-201ENST00000368460 1175 ntAPPRIS ALT2 TSL 3 BASIC20.51■□□□□ 0.87
NXF3Q9H4D5 ISCU-202ENST00000392807 1069 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
NXF3Q9H4D5 EEF1D-202ENST00000395119 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
NXF3Q9H4D5 ISCU-203ENST00000431221 799 ntTSL 2 BASIC20.51■□□□□ 0.87
NXF3Q9H4D5 LINC01063-201ENST00000441644 348 ntTSL 3 BASIC20.51■□□□□ 0.87
NXF3Q9H4D5 HOMER2P1-201ENST00000455653 964 ntBASIC20.51■□□□□ 0.87
NXF3Q9H4D5 RBPMS-AS1-202ENST00000519753 1031 ntTSL 5 BASIC20.51■□□□□ 0.87
NXF3Q9H4D5 GRP-204ENST00000529320 824 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
NXF3Q9H4D5 GCSHP2-201ENST00000560971 527 ntBASIC20.51■□□□□ 0.87
NXF3Q9H4D5 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC20.51■□□□□ 0.87
NXF3Q9H4D5 AC064834.1-201ENST00000606986 503 ntTSL 3 BASIC20.51■□□□□ 0.87
NXF3Q9H4D5 AC243829.1-201ENST00000615128 1059 ntTSL 2 BASIC20.51■□□□□ 0.87
NXF3Q9H4D5 FBXL22-204ENST00000638704 729 ntAPPRIS ALT2 TSL 2 BASIC20.51■□□□□ 0.87
NXF3Q9H4D5 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
NXF3Q9H4D5 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
NXF3Q9H4D5 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC20.51■□□□□ 0.87
NXF3Q9H4D5 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC20.51■□□□□ 0.87
NXF3Q9H4D5 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
NXF3Q9H4D5 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
NXF3Q9H4D5 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
NXF3Q9H4D5 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC20.51■□□□□ 0.87
NXF3Q9H4D5 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC20.51■□□□□ 0.87
NXF3Q9H4D5 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
NXF3Q9H4D5 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
NXF3Q9H4D5 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
NXF3Q9H4D5 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
NXF3Q9H4D5 CYB561-205ENST00000542042 1302 ntTSL 2 BASIC20.51■□□□□ 0.87
NXF3Q9H4D5 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC20.51■□□□□ 0.87
NXF3Q9H4D5 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC20.51■□□□□ 0.87
NXF3Q9H4D5 MAGED2-213ENST00000627068 1811 ntAPPRIS ALT2 TSL 5 BASIC20.5■□□□□ 0.87
NXF3Q9H4D5 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC20.5■□□□□ 0.87
NXF3Q9H4D5 NR1H2-202ENST00000411902 1466 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
NXF3Q9H4D5 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
NXF3Q9H4D5 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC20.5■□□□□ 0.87
NXF3Q9H4D5 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
NXF3Q9H4D5 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
NXF3Q9H4D5 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC20.5■□□□□ 0.87
NXF3Q9H4D5 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC20.5■□□□□ 0.87
NXF3Q9H4D5 COMTD1-201ENST00000372538 976 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
NXF3Q9H4D5 AP000523.1-201ENST00000398242 1049 ntBASIC20.5■□□□□ 0.87
NXF3Q9H4D5 IMP3-202ENST00000403490 1237 ntAPPRIS P1 BASIC20.5■□□□□ 0.87
NXF3Q9H4D5 MIR1302-2HG-202ENST00000473358 712 ntTSL 5 BASIC20.5■□□□□ 0.87
NXF3Q9H4D5 CCNG1-211ENST00000512163 919 ntTSL 2 BASIC20.5■□□□□ 0.87
NXF3Q9H4D5 MOK-234ENST00000524370 1165 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
NXF3Q9H4D5 SSSCA1-206ENST00000531405 879 ntTSL 2 BASIC20.5■□□□□ 0.87
NXF3Q9H4D5 MTHFS-202ENST00000559722 948 ntTSL 2 BASIC20.5■□□□□ 0.87
NXF3Q9H4D5 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC20.5■□□□□ 0.87
NXF3Q9H4D5 YIPF2-209ENST00000590329 958 ntTSL 5 BASIC20.5■□□□□ 0.87
NXF3Q9H4D5 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
NXF3Q9H4D5 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
NXF3Q9H4D5 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC20.5■□□□□ 0.87
NXF3Q9H4D5 IRX1P1-201ENST00000438849 1838 ntBASIC20.5■□□□□ 0.87
NXF3Q9H4D5 LINC01586-201ENST00000506090 1840 ntTSL 2 BASIC20.5■□□□□ 0.87
NXF3Q9H4D5 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
NXF3Q9H4D5 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC20.5■□□□□ 0.87
NXF3Q9H4D5 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC20.49■□□□□ 0.87
NXF3Q9H4D5 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
NXF3Q9H4D5 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC20.49■□□□□ 0.87
NXF3Q9H4D5 TMEM91-210ENST00000542945 1610 ntTSL 2 BASIC20.49■□□□□ 0.87
NXF3Q9H4D5 AC093484.2-201ENST00000580996 2166 ntBASIC20.49■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 35.3 ms