Protein–RNA interactions for Protein: Q9BXS0

COL25A1, Collagen alpha-1(XXV) chain, humanhuman

Predicted RBP Predictions only

Length 654 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL25A1Q9BXS0 AC012617.1-203ENST00000590845 439 ntTSL 2 BASIC19.27■□□□□ 0.68
COL25A1Q9BXS0 AC034238.1-212ENST00000596137 723 ntTSL 5 BASIC19.27■□□□□ 0.68
COL25A1Q9BXS0 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC19.27■□□□□ 0.68
COL25A1Q9BXS0 IL15-208ENST00000529613 1355 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
COL25A1Q9BXS0 SCAND1-203ENST00000615116 1371 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
COL25A1Q9BXS0 PYCR1-202ENST00000337943 1890 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
COL25A1Q9BXS0 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
COL25A1Q9BXS0 AMHR2-202ENST00000379791 1437 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
COL25A1Q9BXS0 TCEAL4-201ENST00000372629 1511 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
COL25A1Q9BXS0 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
COL25A1Q9BXS0 PDE9A-205ENST00000349112 1616 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
COL25A1Q9BXS0 LRRC23-209ENST00000443597 1628 ntAPPRIS P4 TSL 1 (best) BASIC19.26■□□□□ 0.67
COL25A1Q9BXS0 MEIS3-201ENST00000331559 2104 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
COL25A1Q9BXS0 ARHGAP11B-201ENST00000428041 1017 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
COL25A1Q9BXS0 ATG10-207ENST00000513443 978 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
COL25A1Q9BXS0 WDR25-203ENST00000542471 1214 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
COL25A1Q9BXS0 TMEM263-206ENST00000550344 925 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
COL25A1Q9BXS0 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC19.26■□□□□ 0.67
COL25A1Q9BXS0 AC087641.1-201ENST00000557561 1021 ntBASIC19.26■□□□□ 0.67
COL25A1Q9BXS0 NAA60-217ENST00000572942 1089 ntTSL 2 BASIC19.26■□□□□ 0.67
COL25A1Q9BXS0 RLN3-202ENST00000585987 541 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
COL25A1Q9BXS0 WNT1-202ENST00000613114 1278 ntTSL 5 BASIC19.26■□□□□ 0.67
COL25A1Q9BXS0 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC19.26■□□□□ 0.67
COL25A1Q9BXS0 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
COL25A1Q9BXS0 FCER2-201ENST00000346664 1596 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
COL25A1Q9BXS0 FCER2-205ENST00000597921 1560 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
COL25A1Q9BXS0 LRRC61-201ENST00000323078 1684 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
COL25A1Q9BXS0 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
COL25A1Q9BXS0 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
COL25A1Q9BXS0 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
COL25A1Q9BXS0 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
COL25A1Q9BXS0 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC19.25■□□□□ 0.67
COL25A1Q9BXS0 CDYL-203ENST00000397588 2184 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
COL25A1Q9BXS0 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
COL25A1Q9BXS0 TREX1-205ENST00000625293 1783 ntBASIC19.25■□□□□ 0.67
COL25A1Q9BXS0 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
COL25A1Q9BXS0 VKORC1-201ENST00000300851 876 ntTSL 2 BASIC19.25■□□□□ 0.67
COL25A1Q9BXS0 INIP-202ENST00000374236 874 ntTSL 2 BASIC19.25■□□□□ 0.67
COL25A1Q9BXS0 IGHGP-201ENST00000390555 1178 ntBASIC19.25■□□□□ 0.67
COL25A1Q9BXS0 CLDN7-202ENST00000397317 1228 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
COL25A1Q9BXS0 SLC25A6P5-201ENST00000435663 894 ntBASIC19.25■□□□□ 0.67
COL25A1Q9BXS0 LINC02558-202ENST00000436395 298 ntTSL 5 BASIC19.25■□□□□ 0.67
COL25A1Q9BXS0 DICER1-AS1-202ENST00000439819 810 ntTSL 3 BASIC19.25■□□□□ 0.67
COL25A1Q9BXS0 NRSN2-AS1-202ENST00000442637 762 ntTSL 3 BASIC19.25■□□□□ 0.67
COL25A1Q9BXS0 NME1-207ENST00000480143 964 ntTSL 2 BASIC19.25■□□□□ 0.67
COL25A1Q9BXS0 PARP8-218ENST00000513738 596 ntTSL 4 BASIC19.25■□□□□ 0.67
COL25A1Q9BXS0 AC064807.1-203ENST00000520357 575 ntTSL 5 BASIC19.25■□□□□ 0.67
COL25A1Q9BXS0 AP001107.6-201ENST00000526655 516 ntTSL 3 BASIC19.25■□□□□ 0.67
COL25A1Q9BXS0 AC069287.3-201ENST00000527297 589 ntTSL 5 BASIC19.25■□□□□ 0.67
COL25A1Q9BXS0 ZNF710-AS1-201ENST00000558334 1168 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
COL25A1Q9BXS0 AC133919.2-201ENST00000565965 589 ntTSL 4 BASIC19.25■□□□□ 0.67
COL25A1Q9BXS0 ICAM2-205ENST00000578379 1064 ntTSL 5 BASIC19.25■□□□□ 0.67
COL25A1Q9BXS0 ICAM2-206ENST00000578892 1056 ntTSL 3 BASIC19.25■□□□□ 0.67
COL25A1Q9BXS0 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC19.25■□□□□ 0.67
COL25A1Q9BXS0 UCHL5-202ENST00000367449 1507 ntAPPRIS ALT1 TSL 1 (best) BASIC19.25■□□□□ 0.67
COL25A1Q9BXS0 DXO-203ENST00000375356 1533 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
COL25A1Q9BXS0 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
COL25A1Q9BXS0 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
COL25A1Q9BXS0 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
COL25A1Q9BXS0 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
COL25A1Q9BXS0 FKBP8-206ENST00000596558 1756 ntAPPRIS ALT1 TSL 2 BASIC19.24■□□□□ 0.67
COL25A1Q9BXS0 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC19.24■□□□□ 0.67
COL25A1Q9BXS0 WWOX-205ENST00000539474 1670 ntTSL 5 BASIC19.24■□□□□ 0.67
COL25A1Q9BXS0 ACBD4-215ENST00000592162 1684 ntTSL 5 BASIC19.24■□□□□ 0.67
COL25A1Q9BXS0 GPR137-204ENST00000438980 1596 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
COL25A1Q9BXS0 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
COL25A1Q9BXS0 TM2D3-207ENST00000559107 1353 ntTSL 3 BASIC19.24■□□□□ 0.67
COL25A1Q9BXS0 DGUOK-201ENST00000264093 1144 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
COL25A1Q9BXS0 MED16-201ENST00000269814 1199 ntTSL 5 BASIC19.24■□□□□ 0.67
COL25A1Q9BXS0 DGUOK-202ENST00000348222 880 ntTSL 2 BASIC19.24■□□□□ 0.67
COL25A1Q9BXS0 CRLF2-202ENST00000381567 1013 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
COL25A1Q9BXS0 CENPM-204ENST00000402420 688 ntTSL 5 BASIC19.24■□□□□ 0.67
COL25A1Q9BXS0 ELK2BP-201ENST00000415014 1224 ntBASIC19.24■□□□□ 0.67
COL25A1Q9BXS0 METTL21A-205ENST00000426075 1051 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
COL25A1Q9BXS0 AL807752.4-201ENST00000439076 580 ntTSL 2 BASIC19.24■□□□□ 0.67
COL25A1Q9BXS0 AC013402.1-201ENST00000456999 561 ntTSL 4 BASIC19.24■□□□□ 0.67
COL25A1Q9BXS0 AC108449.3-201ENST00000560714 585 ntTSL 3 BASIC19.24■□□□□ 0.67
COL25A1Q9BXS0 AC074135.2-201ENST00000600896 510 ntTSL 3 BASIC19.24■□□□□ 0.67
COL25A1Q9BXS0 HIST1H2AB-201ENST00000615868 393 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
COL25A1Q9BXS0 DGUOK-208ENST00000629438 1029 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
COL25A1Q9BXS0 ALKBH5-203ENST00000541285 1605 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
COL25A1Q9BXS0 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC19.24■□□□□ 0.67
COL25A1Q9BXS0 AC080038.3-201ENST00000623346 1952 ntBASIC19.24■□□□□ 0.67
COL25A1Q9BXS0 LCAT-201ENST00000264005 1507 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
COL25A1Q9BXS0 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
COL25A1Q9BXS0 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
COL25A1Q9BXS0 PPIC-201ENST00000306442 1380 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
COL25A1Q9BXS0 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
COL25A1Q9BXS0 PLGRKT-201ENST00000223864 932 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
COL25A1Q9BXS0 KRTCAP2-201ENST00000295682 552 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
COL25A1Q9BXS0 AL139400.1-201ENST00000366220 510 ntBASIC19.23■□□□□ 0.67
COL25A1Q9BXS0 PSMB8-202ENST00000374882 1124 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
COL25A1Q9BXS0 MRPL20P1-201ENST00000400819 433 ntBASIC19.23■□□□□ 0.67
COL25A1Q9BXS0 EFCAB1-209ENST00000523092 648 ntTSL 2 BASIC19.23■□□□□ 0.67
COL25A1Q9BXS0 CCDC85C-204ENST00000555822 930 ntTSL 5 BASIC19.23■□□□□ 0.67
COL25A1Q9BXS0 AC011511.2-201ENST00000592893 918 ntTSL 3 BASIC19.23■□□□□ 0.67
COL25A1Q9BXS0 AC064836.3-201ENST00000607928 673 ntBASIC19.23■□□□□ 0.67
COL25A1Q9BXS0 AC008735.5-201ENST00000623544 497 ntBASIC19.23■□□□□ 0.67
COL25A1Q9BXS0 ANKRD36-207ENST00000639293 1168 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
COL25A1Q9BXS0 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 23.3 ms