Protein–RNA interactions for Protein: Q99986

VRK1, Serine/threonine-protein kinase VRK1, humanhuman

Predicted RBP Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1Q99986 OR10H2-201ENST00000305899 1041 ntAPPRIS P1 BASIC16.76■□□□□ 0.27
VRK1Q99986 METTL21A-206ENST00000432416 869 ntTSL 3 BASIC16.76■□□□□ 0.27
VRK1Q99986 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC16.76■□□□□ 0.27
VRK1Q99986 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC16.76■□□□□ 0.27
VRK1Q99986 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC16.76■□□□□ 0.27
VRK1Q99986 PHOSPHO2-206ENST00000616481 1252 ntAPPRIS P1 TSL 3 BASIC16.76■□□□□ 0.27
VRK1Q99986 PHOSPHO2-208ENST00000617738 1053 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
VRK1Q99986 CR392000.1-201ENST00000624770 1228 ntBASIC16.76■□□□□ 0.27
VRK1Q99986 FBXL7-202ENST00000504595 4562 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
VRK1Q99986 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
VRK1Q99986 CLUH-201ENST00000435359 5224 ntAPPRIS P2 TSL 5 BASIC16.76■□□□□ 0.27
VRK1Q99986 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC16.76■□□□□ 0.27
VRK1Q99986 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
VRK1Q99986 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
VRK1Q99986 LRWD1-201ENST00000292616 2215 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
VRK1Q99986 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
VRK1Q99986 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC16.75■□□□□ 0.27
VRK1Q99986 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
VRK1Q99986 SPRED3-201ENST00000338502 4778 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
VRK1Q99986 EIF4ENIF1-202ENST00000344710 3115 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
VRK1Q99986 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
VRK1Q99986 RABEPK-204ENST00000394125 1466 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
VRK1Q99986 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC16.75■□□□□ 0.27
VRK1Q99986 AC005332.8-201ENST00000622750 2735 ntBASIC16.75■□□□□ 0.27
VRK1Q99986 KBTBD11-201ENST00000320248 6710 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
VRK1Q99986 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC16.75■□□□□ 0.27
VRK1Q99986 BIK-201ENST00000216115 953 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
VRK1Q99986 TSPY15P-201ENST00000457163 923 ntBASIC16.75■□□□□ 0.27
VRK1Q99986 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC16.75■□□□□ 0.27
VRK1Q99986 AC026412.1-201ENST00000507290 1033 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
VRK1Q99986 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC16.75■□□□□ 0.27
VRK1Q99986 GRAP-204ENST00000573099 846 ntTSL 3 BASIC16.75■□□□□ 0.27
VRK1Q99986 AC020913.2-201ENST00000601929 629 ntTSL 5 BASIC16.75■□□□□ 0.27
VRK1Q99986 ADK-206ENST00000541550 2222 ntTSL 2 BASIC16.75■□□□□ 0.27
VRK1Q99986 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
VRK1Q99986 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
VRK1Q99986 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
VRK1Q99986 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
VRK1Q99986 EVPL-202ENST00000586740 6223 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
VRK1Q99986 AC093484.2-201ENST00000580996 2166 ntBASIC16.75■□□□□ 0.27
VRK1Q99986 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
VRK1Q99986 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
VRK1Q99986 GABBR1-204ENST00000377016 4299 ntTSL 5 BASIC16.75■□□□□ 0.27
VRK1Q99986 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
VRK1Q99986 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
VRK1Q99986 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
VRK1Q99986 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
VRK1Q99986 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
VRK1Q99986 SORCS3-202ENST00000369701 5757 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
VRK1Q99986 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC16.74■□□□□ 0.27
VRK1Q99986 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC16.74■□□□□ 0.27
VRK1Q99986 ESPN-216ENST00000636330 4731 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
VRK1Q99986 SRI-203ENST00000419179 1307 ntTSL 2 BASIC16.74■□□□□ 0.27
VRK1Q99986 NADK-201ENST00000341426 3235 ntAPPRIS P3 TSL 2 BASIC16.74■□□□□ 0.27
VRK1Q99986 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
VRK1Q99986 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
VRK1Q99986 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC16.74■□□□□ 0.27
VRK1Q99986 PODN-203ENST00000395871 2744 ntTSL 5 BASIC16.74■□□□□ 0.27
VRK1Q99986 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
VRK1Q99986 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
VRK1Q99986 TFP1-202ENST00000475455 1573 ntBASIC16.74■□□□□ 0.27
VRK1Q99986 CACNA1A-214ENST00000614285 8410 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
VRK1Q99986 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
VRK1Q99986 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
VRK1Q99986 VKORC1-202ENST00000319788 1077 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
VRK1Q99986 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC16.74■□□□□ 0.27
VRK1Q99986 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC16.74■□□□□ 0.27
VRK1Q99986 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
VRK1Q99986 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC16.74■□□□□ 0.27
VRK1Q99986 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC16.74■□□□□ 0.27
VRK1Q99986 RPS20-210ENST00000523936 899 ntTSL 2 BASIC16.74■□□□□ 0.27
VRK1Q99986 DEUP1-206ENST00000530273 410 ntTSL 3 BASIC16.74■□□□□ 0.27
VRK1Q99986 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC16.74■□□□□ 0.27
VRK1Q99986 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC16.74■□□□□ 0.27
VRK1Q99986 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
VRK1Q99986 LINC01023-201ENST00000606054 436 ntBASIC16.74■□□□□ 0.27
VRK1Q99986 FMR1-AS1_2.1-201ENST00000613724 127 ntBASIC16.74■□□□□ 0.27
VRK1Q99986 SNX21-213ENST00000614929 587 ntTSL 5 BASIC16.74■□□□□ 0.27
VRK1Q99986 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
VRK1Q99986 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC16.74■□□□□ 0.27
VRK1Q99986 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
VRK1Q99986 TFRC-202ENST00000392396 5032 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
VRK1Q99986 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
VRK1Q99986 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC16.74■□□□□ 0.27
VRK1Q99986 CEMP1-202ENST00000567119 1374 ntAPPRIS P2 BASIC16.74■□□□□ 0.27
VRK1Q99986 MALT1-202ENST00000348428 9368 ntAPPRIS P4 TSL 1 (best) BASIC16.74■□□□□ 0.27
VRK1Q99986 UBE2O-201ENST00000319380 5436 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
VRK1Q99986 HEG1-201ENST00000311127 9156 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
VRK1Q99986 FZD1-201ENST00000287934 6963 ntAPPRIS P1 BASIC16.73■□□□□ 0.27
VRK1Q99986 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
VRK1Q99986 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
VRK1Q99986 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
VRK1Q99986 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
VRK1Q99986 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC16.73■□□□□ 0.27
VRK1Q99986 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
VRK1Q99986 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC16.73■□□□□ 0.27
VRK1Q99986 MAN2A1-201ENST00000261483 4667 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
VRK1Q99986 DCAKD-208ENST00000614054 2054 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
VRK1Q99986 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC16.73■□□□□ 0.27
VRK1Q99986 JAG1-201ENST00000254958 6048 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 39.5 ms