Protein–RNA interactions for Protein: Q96NG5

ZNF558, Zinc finger protein 558, humanhuman

Predictions only

Length 402 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF558Q96NG5 PTGIR-204ENST00000596260 1009 ntTSL 2 BASIC20.19■□□□□ 0.82
ZNF558Q96NG5 AC112497.1-201ENST00000624824 639 ntBASIC20.19■□□□□ 0.82
ZNF558Q96NG5 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
ZNF558Q96NG5 GOSR2-210ENST00000576910 1891 ntAPPRIS ALT1 TSL 5 BASIC20.19■□□□□ 0.82
ZNF558Q96NG5 THNSL2-205ENST00000449349 1616 ntTSL 5 BASIC20.19■□□□□ 0.82
ZNF558Q96NG5 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
ZNF558Q96NG5 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC20.19■□□□□ 0.82
ZNF558Q96NG5 FAM50A-202ENST00000393600 1352 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
ZNF558Q96NG5 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
ZNF558Q96NG5 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC20.18■□□□□ 0.82
ZNF558Q96NG5 OSR2-201ENST00000297565 1838 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
ZNF558Q96NG5 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC20.18■□□□□ 0.82
ZNF558Q96NG5 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC20.18■□□□□ 0.82
ZNF558Q96NG5 BDKRB1-202ENST00000553356 1526 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
ZNF558Q96NG5 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
ZNF558Q96NG5 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
ZNF558Q96NG5 FCER2-201ENST00000346664 1596 ntAPPRIS P2 TSL 1 (best) BASIC20.18■□□□□ 0.82
ZNF558Q96NG5 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
ZNF558Q96NG5 FCER2-205ENST00000597921 1560 ntAPPRIS P2 TSL 1 (best) BASIC20.18■□□□□ 0.82
ZNF558Q96NG5 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
ZNF558Q96NG5 SLC50A1-201ENST00000303343 1137 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
ZNF558Q96NG5 ZNF575-201ENST00000314228 1298 ntAPPRIS P1 TSL 2 BASIC20.18■□□□□ 0.82
ZNF558Q96NG5 IFT27-205ENST00000433985 1095 ntAPPRIS ALT1 TSL 1 (best) BASIC20.18■□□□□ 0.82
ZNF558Q96NG5 AL445472.1-201ENST00000452532 1007 ntTSL 2 BASIC20.18■□□□□ 0.82
ZNF558Q96NG5 MTG1-205ENST00000477902 1283 ntTSL 3 BASIC20.18■□□□□ 0.82
ZNF558Q96NG5 AL161669.1-201ENST00000559843 386 ntTSL 3 BASIC20.18■□□□□ 0.82
ZNF558Q96NG5 REXO2-220ENST00000611665 1158 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
ZNF558Q96NG5 AC012366.1-201ENST00000615411 473 ntTSL 5 BASIC20.18■□□□□ 0.82
ZNF558Q96NG5 IFNL4-202ENST00000616270 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
ZNF558Q96NG5 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
ZNF558Q96NG5 KRT14-201ENST00000167586 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
ZNF558Q96NG5 AC016734.2-201ENST00000624325 1377 ntBASIC20.18■□□□□ 0.82
ZNF558Q96NG5 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
ZNF558Q96NG5 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
ZNF558Q96NG5 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
ZNF558Q96NG5 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
ZNF558Q96NG5 TMEM91-210ENST00000542945 1610 ntTSL 2 BASIC20.17■□□□□ 0.82
ZNF558Q96NG5 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC20.17■□□□□ 0.82
ZNF558Q96NG5 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
ZNF558Q96NG5 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
ZNF558Q96NG5 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
ZNF558Q96NG5 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC20.17■□□□□ 0.82
ZNF558Q96NG5 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
ZNF558Q96NG5 ATP5J-203ENST00000400090 647 ntAPPRIS P1 TSL 2 BASIC20.17■□□□□ 0.82
ZNF558Q96NG5 EMC9-202ENST00000419198 953 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
ZNF558Q96NG5 AQP12A-202ENST00000429564 1110 ntAPPRIS P5 TSL 5 BASIC20.17■□□□□ 0.82
ZNF558Q96NG5 AC013402.1-201ENST00000456999 561 ntTSL 4 BASIC20.17■□□□□ 0.82
ZNF558Q96NG5 AC004771.4-201ENST00000576752 474 ntTSL 5 BASIC20.17■□□□□ 0.82
ZNF558Q96NG5 MIF4GD-205ENST00000578305 569 ntTSL 5 BASIC20.17■□□□□ 0.82
ZNF558Q96NG5 AC124016.1-202ENST00000609575 619 ntTSL 2 BASIC20.17■□□□□ 0.82
ZNF558Q96NG5 CALM2-209ENST00000628793 1103 ntTSL 5 BASIC20.17■□□□□ 0.82
ZNF558Q96NG5 AL157888.1-201ENST00000631930 593 ntBASIC20.17■□□□□ 0.82
ZNF558Q96NG5 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
ZNF558Q96NG5 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
ZNF558Q96NG5 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
ZNF558Q96NG5 MYOZ3-203ENST00000517768 1451 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
ZNF558Q96NG5 MAP3K7CL-206ENST00000399928 1904 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
ZNF558Q96NG5 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
ZNF558Q96NG5 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC20.16■□□□□ 0.82
ZNF558Q96NG5 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
ZNF558Q96NG5 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC20.16■□□□□ 0.82
ZNF558Q96NG5 DCTN3-201ENST00000259632 808 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
ZNF558Q96NG5 CHIC2-201ENST00000263921 1194 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
ZNF558Q96NG5 HIST1H2AI-201ENST00000358739 503 ntAPPRIS P1 BASIC20.16■□□□□ 0.82
ZNF558Q96NG5 RASGRP2-208ENST00000394428 444 ntTSL 2 BASIC20.16■□□□□ 0.82
ZNF558Q96NG5 MPG-203ENST00000397817 1039 ntAPPRIS ALT2 TSL 2 BASIC20.16■□□□□ 0.82
ZNF558Q96NG5 SDHD-206ENST00000528182 754 ntTSL 3 BASIC20.16■□□□□ 0.82
ZNF558Q96NG5 TMEM220-AS1-201ENST00000579114 575 ntTSL 4 BASIC20.16■□□□□ 0.82
ZNF558Q96NG5 TPSB2-201ENST00000606293 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
ZNF558Q96NG5 SMN2-213ENST00000614240 804 ntAPPRIS ALT2 TSL 5 BASIC20.16■□□□□ 0.82
ZNF558Q96NG5 SPEG-225ENST00000617028 815 ntTSL 5 BASIC20.16■□□□□ 0.82
ZNF558Q96NG5 AC079602.3-201ENST00000623931 403 ntBASIC20.16■□□□□ 0.82
ZNF558Q96NG5 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
ZNF558Q96NG5 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC20.16■□□□□ 0.82
ZNF558Q96NG5 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC20.16■□□□□ 0.82
ZNF558Q96NG5 EMX1-202ENST00000394111 1528 ntTSL 3 BASIC20.16■□□□□ 0.82
ZNF558Q96NG5 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
ZNF558Q96NG5 AL162741.1-201ENST00000565563 1558 ntBASIC20.16■□□□□ 0.82
ZNF558Q96NG5 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
ZNF558Q96NG5 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC20.16■□□□□ 0.82
ZNF558Q96NG5 PRELID3A-203ENST00000587735 1694 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
ZNF558Q96NG5 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
ZNF558Q96NG5 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
ZNF558Q96NG5 STRA8-201ENST00000275764 993 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
ZNF558Q96NG5 ACY1-210ENST00000494103 1298 ntTSL 3 BASIC20.15■□□□□ 0.82
ZNF558Q96NG5 YPEL3-204ENST00000563788 730 ntAPPRIS P1 TSL 3 BASIC20.15■□□□□ 0.82
ZNF558Q96NG5 AL136038.4-201ENST00000603606 1261 ntBASIC20.15■□□□□ 0.82
ZNF558Q96NG5 KCNE1B-204ENST00000623803 811 ntAPPRIS P2 TSL 1 (best) BASIC20.15■□□□□ 0.82
ZNF558Q96NG5 AL365255.1-201ENST00000637702 847 ntTSL 2 BASIC20.15■□□□□ 0.82
ZNF558Q96NG5 ANKRD36-207ENST00000639293 1168 ntAPPRIS ALT2 TSL 5 BASIC20.15■□□□□ 0.82
ZNF558Q96NG5 AMACR-205ENST00000426255 1316 ntTSL 2 BASIC20.15■□□□□ 0.82
ZNF558Q96NG5 DTNBP1-203ENST00000355917 1359 ntTSL 5 BASIC20.15■□□□□ 0.82
ZNF558Q96NG5 MIR4300HG-201ENST00000500502 1397 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
ZNF558Q96NG5 C6orf203-202ENST00000405204 1420 ntAPPRIS P1 TSL 2 BASIC20.15■□□□□ 0.82
ZNF558Q96NG5 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC20.15■□□□□ 0.82
ZNF558Q96NG5 GAS7-210ENST00000579158 1528 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
ZNF558Q96NG5 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC20.15■□□□□ 0.82
ZNF558Q96NG5 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC20.15■□□□□ 0.82
ZNF558Q96NG5 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
ZNF558Q96NG5 LINC01006-201ENST00000333319 2292 ntBASIC20.14■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 25.9 ms