Protein–RNA interactions for Protein: Q96IW2

SHD, SH2 domain-containing adapter protein D, humanhuman

Predictions only

Length 340 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHDQ96IW2 SERF1B-202ENST00000380751 703 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
SHDQ96IW2 C7orf49-209ENST00000483029 596 ntTSL 2 BASIC19.18■□□□□ 0.66
SHDQ96IW2 ORAOV1-210ENST00000539414 817 ntAPPRIS ALT1 TSL 2 BASIC19.18■□□□□ 0.66
SHDQ96IW2 AP005212.1-201ENST00000581547 1997 ntBASIC19.18■□□□□ 0.66
SHDQ96IW2 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
SHDQ96IW2 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
SHDQ96IW2 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
SHDQ96IW2 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
SHDQ96IW2 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
SHDQ96IW2 KRT8P7-201ENST00000533003 1432 ntBASIC19.17■□□□□ 0.66
SHDQ96IW2 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
SHDQ96IW2 ZNF815P-204ENST00000434898 1737 ntBASIC19.17■□□□□ 0.66
SHDQ96IW2 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC19.17■□□□□ 0.66
SHDQ96IW2 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
SHDQ96IW2 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SHDQ96IW2 PARK7-201ENST00000338639 949 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SHDQ96IW2 DFFB-203ENST00000341385 572 ntTSL 5 BASIC19.17■□□□□ 0.66
SHDQ96IW2 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
SHDQ96IW2 EEF1E1-202ENST00000429723 562 ntTSL 3 BASIC19.17■□□□□ 0.66
SHDQ96IW2 TTTY14-203ENST00000447937 920 ntTSL 3 BASIC19.17■□□□□ 0.66
SHDQ96IW2 PENK-208ENST00000523051 772 ntTSL 5 BASIC19.17■□□□□ 0.66
SHDQ96IW2 TRAF3IP2-AS1-208ENST00000525151 609 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
SHDQ96IW2 ZBED5-AS1-202ENST00000529014 771 ntTSL 5 BASIC19.17■□□□□ 0.66
SHDQ96IW2 ADAM10-217ENST00000561288 583 ntTSL 3 BASIC19.17■□□□□ 0.66
SHDQ96IW2 RNF126P1-202ENST00000569893 925 ntBASIC19.17■□□□□ 0.66
SHDQ96IW2 AC015961.2-201ENST00000589281 701 ntTSL 3 BASIC19.17■□□□□ 0.66
SHDQ96IW2 AC036176.1-201ENST00000589905 785 ntTSL 2 BASIC19.17■□□□□ 0.66
SHDQ96IW2 AC064862.7-201ENST00000604520 867 ntBASIC19.17■□□□□ 0.66
SHDQ96IW2 IGHV3-41-201ENST00000613121 348 ntBASIC19.17■□□□□ 0.66
SHDQ96IW2 LITAF-220ENST00000620789 692 ntTSL 5 BASIC19.17■□□□□ 0.66
SHDQ96IW2 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC19.17■□□□□ 0.66
SHDQ96IW2 AC016757.1-205ENST00000470346 1888 ntTSL 2 BASIC19.17■□□□□ 0.66
SHDQ96IW2 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
SHDQ96IW2 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SHDQ96IW2 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
SHDQ96IW2 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
SHDQ96IW2 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
SHDQ96IW2 TNFAIP3-207ENST00000614035 1430 ntTSL 5 BASIC19.17■□□□□ 0.66
SHDQ96IW2 CRYZL1-203ENST00000381540 1482 ntTSL 2 BASIC19.16■□□□□ 0.66
SHDQ96IW2 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
SHDQ96IW2 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
SHDQ96IW2 STEAP1B-201ENST00000404369 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
SHDQ96IW2 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
SHDQ96IW2 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
SHDQ96IW2 Z83836.1-201ENST00000624605 1642 ntBASIC19.16■□□□□ 0.66
SHDQ96IW2 ATP5J-201ENST00000284971 614 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
SHDQ96IW2 C1orf43-204ENST00000368518 1278 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
SHDQ96IW2 MRPL43-208ENST00000370242 884 ntTSL 2 BASIC19.16■□□□□ 0.66
SHDQ96IW2 AC074051.2-201ENST00000565115 352 ntBASIC19.16■□□□□ 0.66
SHDQ96IW2 TK1-205ENST00000590862 642 ntTSL 3 BASIC19.16■□□□□ 0.66
SHDQ96IW2 L34079.3-201ENST00000600242 546 ntTSL 4 BASIC19.16■□□□□ 0.66
SHDQ96IW2 Z69720.1-201ENST00000601483 472 ntBASIC19.16■□□□□ 0.66
SHDQ96IW2 AL353801.3-201ENST00000609898 542 ntBASIC19.16■□□□□ 0.66
SHDQ96IW2 SPINK2-205ENST00000616980 677 ntTSL 5 BASIC19.16■□□□□ 0.66
SHDQ96IW2 AL691432.2-201ENST00000607222 2038 ntBASIC19.16■□□□□ 0.66
SHDQ96IW2 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
SHDQ96IW2 MAFG-202ENST00000392366 1743 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
SHDQ96IW2 ZNF655-203ENST00000357864 1370 ntTSL 2 BASIC19.16■□□□□ 0.66
SHDQ96IW2 SEPT9-211ENST00000585930 1387 ntTSL 2 BASIC19.16■□□□□ 0.66
SHDQ96IW2 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
SHDQ96IW2 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
SHDQ96IW2 SPSB3-201ENST00000301717 1449 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
SHDQ96IW2 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
SHDQ96IW2 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
SHDQ96IW2 FBXL18-203ENST00000453700 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
SHDQ96IW2 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC19.15■□□□□ 0.66
SHDQ96IW2 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
SHDQ96IW2 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
SHDQ96IW2 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC19.15■□□□□ 0.66
SHDQ96IW2 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
SHDQ96IW2 CELA2A-201ENST00000359621 919 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
SHDQ96IW2 C7orf34-201ENST00000409607 766 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
SHDQ96IW2 AP001625.2-201ENST00000442605 575 ntTSL 2 BASIC19.15■□□□□ 0.66
SHDQ96IW2 PCAT7-201ENST00000452148 1164 ntTSL 2 BASIC19.15■□□□□ 0.66
SHDQ96IW2 NECTIN3-AS1-204ENST00000476301 568 ntTSL 4 BASIC19.15■□□□□ 0.66
SHDQ96IW2 AC084125.4-201ENST00000580385 338 ntTSL 3 BASIC19.15■□□□□ 0.66
SHDQ96IW2 AC138894.3-201ENST00000603787 634 ntBASIC19.15■□□□□ 0.66
SHDQ96IW2 BX640515.1-201ENST00000617215 977 ntBASIC19.15■□□□□ 0.66
SHDQ96IW2 CYP1B1-AS1-214ENST00000620177 554 ntTSL 4 BASIC19.15■□□□□ 0.66
SHDQ96IW2 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
SHDQ96IW2 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
SHDQ96IW2 AC026310.3-201ENST00000625186 2373 ntBASIC19.15■□□□□ 0.66
SHDQ96IW2 SETD3-201ENST00000329331 1330 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
SHDQ96IW2 ZFYVE21-202ENST00000311141 1383 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
SHDQ96IW2 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC19.15■□□□□ 0.66
SHDQ96IW2 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC19.15■□□□□ 0.66
SHDQ96IW2 KRT8P3-201ENST00000519669 1449 ntBASIC19.15■□□□□ 0.66
SHDQ96IW2 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
SHDQ96IW2 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
SHDQ96IW2 STARD10-218ENST00000543304 1513 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
SHDQ96IW2 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC19.14■□□□□ 0.66
SHDQ96IW2 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.66
SHDQ96IW2 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
SHDQ96IW2 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
SHDQ96IW2 RPS6KB1-204ENST00000443572 1913 ntTSL 2 BASIC19.14■□□□□ 0.65
SHDQ96IW2 MRPL43-203ENST00000318364 1010 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
SHDQ96IW2 MRPL43-204ENST00000342071 894 ntTSL 5 BASIC19.14■□□□□ 0.65
SHDQ96IW2 TBPL1-203ENST00000367871 808 ntTSL 2 BASIC19.14■□□□□ 0.65
SHDQ96IW2 TEX30-205ENST00000376029 959 ntTSL 2 BASIC19.14■□□□□ 0.65
SHDQ96IW2 SLC2A1-204ENST00000460369 541 ntTSL 2 BASIC19.14■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 16.9 ms