Protein–RNA interactions for Protein: Q8WZA2

RAPGEF4, Rap guanine nucleotide exchange factor 4, humanhuman

Predictions only

Length 1,011 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF4Q8WZA2 AL365255.1-201ENST00000637702 847 ntTSL 2 BASIC24.91■■□□□ 1.58
RAPGEF4Q8WZA2 C6orf136-203ENST00000376473 1402 ntAPPRIS P1 TSL 1 (best) BASIC24.91■■□□□ 1.58
RAPGEF4Q8WZA2 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC24.91■■□□□ 1.58
RAPGEF4Q8WZA2 ZBTB22-208ENST00000431845 2651 ntAPPRIS P1 TSL 1 (best) BASIC24.91■■□□□ 1.58
RAPGEF4Q8WZA2 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC24.91■■□□□ 1.58
RAPGEF4Q8WZA2 NAA50-209ENST00000497525 1385 ntTSL 2 BASIC24.91■■□□□ 1.58
RAPGEF4Q8WZA2 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC24.91■■□□□ 1.58
RAPGEF4Q8WZA2 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC24.91■■□□□ 1.58
RAPGEF4Q8WZA2 CHID1-203ENST00000436108 1477 ntAPPRIS P1 TSL 1 (best) BASIC24.9■■□□□ 1.58
RAPGEF4Q8WZA2 MYOZ3-203ENST00000517768 1451 ntAPPRIS P1 TSL 1 (best) BASIC24.9■■□□□ 1.58
RAPGEF4Q8WZA2 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC24.9■■□□□ 1.58
RAPGEF4Q8WZA2 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC24.9■■□□□ 1.58
RAPGEF4Q8WZA2 AP002383.4-201ENST00000442518 975 ntBASIC24.9■■□□□ 1.58
RAPGEF4Q8WZA2 AL445472.1-201ENST00000452532 1007 ntTSL 2 BASIC24.9■■□□□ 1.58
RAPGEF4Q8WZA2 AC013402.1-201ENST00000456999 561 ntTSL 4 BASIC24.9■■□□□ 1.58
RAPGEF4Q8WZA2 SPEG-225ENST00000617028 815 ntTSL 5 BASIC24.9■■□□□ 1.58
RAPGEF4Q8WZA2 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC24.9■■□□□ 1.58
RAPGEF4Q8WZA2 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC24.9■■□□□ 1.58
RAPGEF4Q8WZA2 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC24.9■■□□□ 1.58
RAPGEF4Q8WZA2 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC24.9■■□□□ 1.58
RAPGEF4Q8WZA2 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC24.89■■□□□ 1.58
RAPGEF4Q8WZA2 LINC01006-201ENST00000333319 2292 ntBASIC24.89■■□□□ 1.58
RAPGEF4Q8WZA2 AMACR-205ENST00000426255 1316 ntTSL 2 BASIC24.89■■□□□ 1.58
RAPGEF4Q8WZA2 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC24.89■■□□□ 1.58
RAPGEF4Q8WZA2 C6orf203-202ENST00000405204 1420 ntAPPRIS P1 TSL 2 BASIC24.89■■□□□ 1.58
RAPGEF4Q8WZA2 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC24.89■■□□□ 1.58
RAPGEF4Q8WZA2 STRA8-201ENST00000275764 993 ntAPPRIS P1 TSL 1 (best) BASIC24.89■■□□□ 1.58
RAPGEF4Q8WZA2 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC24.89■■□□□ 1.58
RAPGEF4Q8WZA2 AURKAIP1-202ENST00000338338 1047 ntAPPRIS P1 TSL 1 (best) BASIC24.89■■□□□ 1.58
RAPGEF4Q8WZA2 DHRS4-203ENST00000397075 727 ntTSL 2 BASIC24.89■■□□□ 1.58
RAPGEF4Q8WZA2 LENG8-AS1-201ENST00000416022 582 ntTSL 3 BASIC24.89■■□□□ 1.58
RAPGEF4Q8WZA2 HLA-F-220ENST00000434407 884 ntBASIC24.89■■□□□ 1.58
RAPGEF4Q8WZA2 TMEM220-AS1-201ENST00000579114 575 ntTSL 4 BASIC24.89■■□□□ 1.58
RAPGEF4Q8WZA2 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC24.89■■□□□ 1.57
RAPGEF4Q8WZA2 MIR4300HG-201ENST00000500502 1397 ntTSL 1 (best) BASIC24.89■■□□□ 1.57
RAPGEF4Q8WZA2 TMEM91-210ENST00000542945 1610 ntTSL 2 BASIC24.89■■□□□ 1.57
RAPGEF4Q8WZA2 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC24.89■■□□□ 1.57
RAPGEF4Q8WZA2 AC112907.3-201ENST00000577781 2400 ntBASIC24.88■■□□□ 1.57
RAPGEF4Q8WZA2 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC24.88■■□□□ 1.57
RAPGEF4Q8WZA2 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC24.88■■□□□ 1.57
RAPGEF4Q8WZA2 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC24.88■■□□□ 1.57
RAPGEF4Q8WZA2 GAS7-210ENST00000579158 1528 ntTSL 1 (best) BASIC24.88■■□□□ 1.57
RAPGEF4Q8WZA2 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC24.88■■□□□ 1.57
RAPGEF4Q8WZA2 HAAO-201ENST00000294973 1265 ntAPPRIS P1 TSL 1 (best) BASIC24.88■■□□□ 1.57
RAPGEF4Q8WZA2 SUMF2-203ENST00000395435 1287 ntTSL 2 BASIC24.88■■□□□ 1.57
RAPGEF4Q8WZA2 GGT1-208ENST00000404920 657 ntTSL 1 (best) BASIC24.88■■□□□ 1.57
RAPGEF4Q8WZA2 GGTLC2-203ENST00000480559 657 ntTSL 1 (best) BASIC24.88■■□□□ 1.57
RAPGEF4Q8WZA2 C7orf49-209ENST00000483029 596 ntTSL 2 BASIC24.88■■□□□ 1.57
RAPGEF4Q8WZA2 RPL26L1-205ENST00000519974 695 ntAPPRIS P1 TSL 3 BASIC24.88■■□□□ 1.57
RAPGEF4Q8WZA2 KRT8P26-201ENST00000534154 1276 ntBASIC24.88■■□□□ 1.57
RAPGEF4Q8WZA2 SELENOH-204ENST00000534355 818 ntAPPRIS P2 TSL 1 (best) BASIC24.88■■□□□ 1.57
RAPGEF4Q8WZA2 MIR3917-201ENST00000580971 93 ntBASIC24.88■■□□□ 1.57
RAPGEF4Q8WZA2 AL136038.4-201ENST00000603606 1261 ntBASIC24.88■■□□□ 1.57
RAPGEF4Q8WZA2 WDR6-223ENST00000627177 207 ntTSL 2 BASIC24.88■■□□□ 1.57
RAPGEF4Q8WZA2 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC24.88■■□□□ 1.57
RAPGEF4Q8WZA2 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC24.88■■□□□ 1.57
RAPGEF4Q8WZA2 PAQR6-201ENST00000292291 1908 ntAPPRIS P3 TSL 1 (best) BASIC24.88■■□□□ 1.57
RAPGEF4Q8WZA2 AC093525.10-201ENST00000625130 1569 ntBASIC24.88■■□□□ 1.57
RAPGEF4Q8WZA2 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC24.88■■□□□ 1.57
RAPGEF4Q8WZA2 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC24.88■■□□□ 1.57
RAPGEF4Q8WZA2 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC24.87■■□□□ 1.57
RAPGEF4Q8WZA2 BCL11A-209ENST00000489516 1508 ntTSL 5 BASIC24.87■■□□□ 1.57
RAPGEF4Q8WZA2 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC24.87■■□□□ 1.57
RAPGEF4Q8WZA2 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC24.87■■□□□ 1.57
RAPGEF4Q8WZA2 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC24.87■■□□□ 1.57
RAPGEF4Q8WZA2 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC24.87■■□□□ 1.57
RAPGEF4Q8WZA2 DBNDD2-202ENST00000360981 1078 ntAPPRIS P1 TSL 1 (best) BASIC24.87■■□□□ 1.57
RAPGEF4Q8WZA2 PPIH-202ENST00000372549 327 ntTSL 3 BASIC24.87■■□□□ 1.57
RAPGEF4Q8WZA2 UFSP1-201ENST00000388761 996 ntAPPRIS P1 BASIC24.87■■□□□ 1.57
RAPGEF4Q8WZA2 KRTCAP3-202ENST00000407293 942 ntTSL 2 BASIC24.87■■□□□ 1.57
RAPGEF4Q8WZA2 MCFD2-203ENST00000409147 671 ntTSL 2 BASIC24.87■■□□□ 1.57
RAPGEF4Q8WZA2 RN7SL510P-201ENST00000581311 263 ntBASIC24.87■■□□□ 1.57
RAPGEF4Q8WZA2 AP002414.4-201ENST00000589764 1148 ntBASIC24.87■■□□□ 1.57
RAPGEF4Q8WZA2 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC24.87■■□□□ 1.57
RAPGEF4Q8WZA2 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC24.87■■□□□ 1.57
RAPGEF4Q8WZA2 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC24.87■■□□□ 1.57
RAPGEF4Q8WZA2 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC24.87■■□□□ 1.57
RAPGEF4Q8WZA2 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC24.87■■□□□ 1.57
RAPGEF4Q8WZA2 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC24.86■■□□□ 1.57
RAPGEF4Q8WZA2 ASCL5-202ENST00000458416 1420 ntAPPRIS P1 BASIC24.86■■□□□ 1.57
RAPGEF4Q8WZA2 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC24.86■■□□□ 1.57
RAPGEF4Q8WZA2 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC24.86■■□□□ 1.57
RAPGEF4Q8WZA2 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC24.86■■□□□ 1.57
RAPGEF4Q8WZA2 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC24.86■■□□□ 1.57
RAPGEF4Q8WZA2 GNGT2-201ENST00000300406 889 ntAPPRIS P1 TSL 1 (best) BASIC24.86■■□□□ 1.57
RAPGEF4Q8WZA2 KCNK7-202ENST00000342202 1283 ntTSL 1 (best) BASIC24.86■■□□□ 1.57
RAPGEF4Q8WZA2 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC24.86■■□□□ 1.57
RAPGEF4Q8WZA2 NDUFB9-202ENST00000517367 636 ntTSL 3 BASIC24.86■■□□□ 1.57
RAPGEF4Q8WZA2 NAA38-203ENST00000575071 553 ntTSL 2 BASIC24.86■■□□□ 1.57
RAPGEF4Q8WZA2 TNNT1-204ENST00000585321 995 ntAPPRIS ALT2 TSL 5 BASIC24.86■■□□□ 1.57
RAPGEF4Q8WZA2 TPSB2-201ENST00000606293 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC24.86■■□□□ 1.57
RAPGEF4Q8WZA2 CADM1-222ENST00000616271 1246 ntTSL 5 BASIC24.86■■□□□ 1.57
RAPGEF4Q8WZA2 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC24.86■■□□□ 1.57
RAPGEF4Q8WZA2 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC24.86■■□□□ 1.57
RAPGEF4Q8WZA2 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC24.86■■□□□ 1.57
RAPGEF4Q8WZA2 IFRD1-201ENST00000005558 1834 ntAPPRIS P1 TSL 1 (best) BASIC24.86■■□□□ 1.57
RAPGEF4Q8WZA2 MAFG-202ENST00000392366 1743 ntAPPRIS P1 TSL 1 (best) BASIC24.86■■□□□ 1.57
RAPGEF4Q8WZA2 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC24.86■■□□□ 1.57
RAPGEF4Q8WZA2 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC24.85■■□□□ 1.57
RAPGEF4Q8WZA2 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC24.85■■□□□ 1.57
Retrieved 100 of 98,524 protein–RNA pairs in 25.2 ms