Protein–RNA interactions for Protein: Q8N6Y1

PCDH20, Protocadherin-20, humanhuman

Known RBP Predictions only

Length 951 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH20Q8N6Y1 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
PCDH20Q8N6Y1 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC19.41■□□□□ 0.7
PCDH20Q8N6Y1 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
PCDH20Q8N6Y1 AKIP1-207ENST00000529876 1421 ntTSL 2 BASIC19.41■□□□□ 0.7
PCDH20Q8N6Y1 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
PCDH20Q8N6Y1 NAPA-210ENST00000595227 1460 ntTSL 3 BASIC19.41■□□□□ 0.7
PCDH20Q8N6Y1 IL6R-208ENST00000622330 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
PCDH20Q8N6Y1 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC19.41■□□□□ 0.7
PCDH20Q8N6Y1 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC19.4■□□□□ 0.7
PCDH20Q8N6Y1 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
PCDH20Q8N6Y1 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
PCDH20Q8N6Y1 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
PCDH20Q8N6Y1 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
PCDH20Q8N6Y1 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
PCDH20Q8N6Y1 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
PCDH20Q8N6Y1 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
PCDH20Q8N6Y1 ZNF584-202ENST00000322834 1042 ntTSL 2 BASIC19.4■□□□□ 0.7
PCDH20Q8N6Y1 ING1-202ENST00000338450 1189 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
PCDH20Q8N6Y1 ERICH4-201ENST00000378187 946 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
PCDH20Q8N6Y1 CYB561D2-204ENST00000424512 1212 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
PCDH20Q8N6Y1 SLC25A1P2-201ENST00000430693 912 ntBASIC19.4■□□□□ 0.7
PCDH20Q8N6Y1 ZNF534-203ENST00000432303 956 ntTSL 2 BASIC19.4■□□□□ 0.7
PCDH20Q8N6Y1 ABHD11-207ENST00000458339 890 ntTSL 3 BASIC19.4■□□□□ 0.7
PCDH20Q8N6Y1 SLC25A11-202ENST00000544061 952 ntTSL 3 BASIC19.4■□□□□ 0.7
PCDH20Q8N6Y1 CRNDE-210ENST00000560912 459 ntTSL 5 BASIC19.4■□□□□ 0.7
PCDH20Q8N6Y1 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
PCDH20Q8N6Y1 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC19.4■□□□□ 0.7
PCDH20Q8N6Y1 BIRC7-202ENST00000342412 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
PCDH20Q8N6Y1 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
PCDH20Q8N6Y1 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
PCDH20Q8N6Y1 RHBDL1-201ENST00000219551 1560 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
PCDH20Q8N6Y1 APBB1-210ENST00000530885 1626 ntTSL 2 BASIC19.4■□□□□ 0.7
PCDH20Q8N6Y1 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC19.4■□□□□ 0.7
PCDH20Q8N6Y1 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
PCDH20Q8N6Y1 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC19.39■□□□□ 0.7
PCDH20Q8N6Y1 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
PCDH20Q8N6Y1 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
PCDH20Q8N6Y1 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.7
PCDH20Q8N6Y1 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
PCDH20Q8N6Y1 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC19.39■□□□□ 0.7
PCDH20Q8N6Y1 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC19.39■□□□□ 0.7
PCDH20Q8N6Y1 HIBADH-201ENST00000265395 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
PCDH20Q8N6Y1 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
PCDH20Q8N6Y1 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
PCDH20Q8N6Y1 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC19.39■□□□□ 0.69
PCDH20Q8N6Y1 CCR12P-201ENST00000446203 998 ntBASIC19.39■□□□□ 0.69
PCDH20Q8N6Y1 CA15P1-201ENST00000481698 905 ntBASIC19.39■□□□□ 0.69
PCDH20Q8N6Y1 AC128688.1-201ENST00000487626 519 ntBASIC19.39■□□□□ 0.69
PCDH20Q8N6Y1 PDCD6-206ENST00000507528 1088 ntAPPRIS ALT1 TSL 1 (best) BASIC19.39■□□□□ 0.69
PCDH20Q8N6Y1 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC19.39■□□□□ 0.69
PCDH20Q8N6Y1 AC008735.6-201ENST00000635964 1292 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
PCDH20Q8N6Y1 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
PCDH20Q8N6Y1 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
PCDH20Q8N6Y1 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
PCDH20Q8N6Y1 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
PCDH20Q8N6Y1 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC19.39■□□□□ 0.69
PCDH20Q8N6Y1 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
PCDH20Q8N6Y1 HSCB-201ENST00000216027 1114 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
PCDH20Q8N6Y1 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
PCDH20Q8N6Y1 CALM2-201ENST00000272298 1302 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
PCDH20Q8N6Y1 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
PCDH20Q8N6Y1 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
PCDH20Q8N6Y1 KRT17P2-202ENST00000326333 1174 ntTSL 2 BASIC19.38■□□□□ 0.69
PCDH20Q8N6Y1 HIST1H2APS4-201ENST00000362070 348 ntBASIC19.38■□□□□ 0.69
PCDH20Q8N6Y1 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
PCDH20Q8N6Y1 TSPY23P-201ENST00000440136 739 ntBASIC19.38■□□□□ 0.69
PCDH20Q8N6Y1 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC19.38■□□□□ 0.69
PCDH20Q8N6Y1 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
PCDH20Q8N6Y1 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
PCDH20Q8N6Y1 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC19.38■□□□□ 0.69
PCDH20Q8N6Y1 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
PCDH20Q8N6Y1 FFAR4-203ENST00000604414 1142 ntTSL 3 BASIC19.38■□□□□ 0.69
PCDH20Q8N6Y1 AC004408.2-201ENST00000623613 2777 ntBASIC19.38■□□□□ 0.69
PCDH20Q8N6Y1 SLC35A2-217ENST00000635589 1424 ntTSL 2 BASIC19.38■□□□□ 0.69
PCDH20Q8N6Y1 AC116562.4-202ENST00000641738 218 ntBASIC19.38■□□□□ 0.69
PCDH20Q8N6Y1 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
PCDH20Q8N6Y1 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC19.37■□□□□ 0.69
PCDH20Q8N6Y1 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
PCDH20Q8N6Y1 ENTPD8-204ENST00000472938 1749 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
PCDH20Q8N6Y1 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
PCDH20Q8N6Y1 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
PCDH20Q8N6Y1 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC19.37■□□□□ 0.69
PCDH20Q8N6Y1 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
PCDH20Q8N6Y1 TPPP3-201ENST00000290942 1116 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
PCDH20Q8N6Y1 TMIGD2-201ENST00000301272 1262 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
PCDH20Q8N6Y1 PTMS-201ENST00000309083 1139 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
PCDH20Q8N6Y1 ZCCHC24-201ENST00000372333 906 ntTSL 2 BASIC19.37■□□□□ 0.69
PCDH20Q8N6Y1 TPPP3-202ENST00000393957 1058 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
PCDH20Q8N6Y1 TSPY1-201ENST00000423647 1171 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
PCDH20Q8N6Y1 RAB2A-211ENST00000531289 1058 ntTSL 2 BASIC19.37■□□□□ 0.69
PCDH20Q8N6Y1 PPOX-219ENST00000544598 813 ntTSL 2 BASIC19.37■□□□□ 0.69
PCDH20Q8N6Y1 DUT-205ENST00000558813 769 ntTSL 2 BASIC19.37■□□□□ 0.69
PCDH20Q8N6Y1 AC005363.2-201ENST00000618631 242 ntBASIC19.37■□□□□ 0.69
PCDH20Q8N6Y1 TSTD3-202ENST00000636394 336 ntAPPRIS ALT2 TSL 3 BASIC19.37■□□□□ 0.69
PCDH20Q8N6Y1 CLN6-221ENST00000637494 765 ntTSL 5 BASIC19.37■□□□□ 0.69
PCDH20Q8N6Y1 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
PCDH20Q8N6Y1 TP73-202ENST00000354437 2140 ntTSL 5 BASIC19.37■□□□□ 0.69
PCDH20Q8N6Y1 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
PCDH20Q8N6Y1 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
PCDH20Q8N6Y1 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 27.6 ms