Protein–RNA interactions for Protein: Q6NVH7

SWSAP1, ATPase SWSAP1, humanhuman

Predictions only

Length 229 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SWSAP1Q6NVH7 PEX16-202ENST00000378750 1335 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
SWSAP1Q6NVH7 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
SWSAP1Q6NVH7 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC21.17■□□□□ 0.98
SWSAP1Q6NVH7 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC21.17■□□□□ 0.98
SWSAP1Q6NVH7 GJA4-201ENST00000342280 1622 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
SWSAP1Q6NVH7 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
SWSAP1Q6NVH7 GPAT2P1-201ENST00000444924 1672 ntBASIC21.17■□□□□ 0.98
SWSAP1Q6NVH7 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC21.17■□□□□ 0.98
SWSAP1Q6NVH7 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC21.17■□□□□ 0.98
SWSAP1Q6NVH7 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
SWSAP1Q6NVH7 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
SWSAP1Q6NVH7 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC21.16■□□□□ 0.98
SWSAP1Q6NVH7 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
SWSAP1Q6NVH7 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC21.16■□□□□ 0.98
SWSAP1Q6NVH7 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC21.16■□□□□ 0.98
SWSAP1Q6NVH7 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC21.16■□□□□ 0.98
SWSAP1Q6NVH7 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC21.16■□□□□ 0.98
SWSAP1Q6NVH7 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC21.16■□□□□ 0.98
SWSAP1Q6NVH7 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC21.16■□□□□ 0.98
SWSAP1Q6NVH7 CDC14B-208ENST00000463569 1734 ntAPPRIS ALT2 TSL 5 BASIC21.16■□□□□ 0.98
SWSAP1Q6NVH7 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC21.16■□□□□ 0.98
SWSAP1Q6NVH7 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
SWSAP1Q6NVH7 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
SWSAP1Q6NVH7 SLC27A4-202ENST00000372870 1557 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
SWSAP1Q6NVH7 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
SWSAP1Q6NVH7 KRT8P3-201ENST00000519669 1449 ntBASIC21.16■□□□□ 0.98
SWSAP1Q6NVH7 KLK14-201ENST00000156499 1060 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
SWSAP1Q6NVH7 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
SWSAP1Q6NVH7 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC21.16■□□□□ 0.98
SWSAP1Q6NVH7 ULK4P3-205ENST00000568486 1158 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
SWSAP1Q6NVH7 NT5C-210ENST00000582160 860 ntTSL 2 BASIC21.16■□□□□ 0.98
SWSAP1Q6NVH7 JOSD2-204ENST00000598418 996 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
SWSAP1Q6NVH7 AC140113.3-201ENST00000605663 199 ntBASIC21.16■□□□□ 0.98
SWSAP1Q6NVH7 MON1A-202ENST00000417270 2527 ntAPPRIS ALT2 TSL 5 BASIC21.16■□□□□ 0.98
SWSAP1Q6NVH7 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
SWSAP1Q6NVH7 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
SWSAP1Q6NVH7 AIRN-201ENST00000601203 4374 ntBASIC21.15■□□□□ 0.98
SWSAP1Q6NVH7 IRX1P1-201ENST00000438849 1838 ntBASIC21.15■□□□□ 0.98
SWSAP1Q6NVH7 AC141586.3-201ENST00000562166 1838 ntBASIC21.15■□□□□ 0.98
SWSAP1Q6NVH7 FEM1AP3-201ENST00000403722 1741 ntBASIC21.15■□□□□ 0.98
SWSAP1Q6NVH7 SYNDIG1L-201ENST00000331628 2607 ntAPPRIS P1 TSL 5 BASIC21.15■□□□□ 0.98
SWSAP1Q6NVH7 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC21.15■□□□□ 0.98
SWSAP1Q6NVH7 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC21.15■□□□□ 0.98
SWSAP1Q6NVH7 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
SWSAP1Q6NVH7 DNAJC4-201ENST00000321460 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
SWSAP1Q6NVH7 TSPY5P-201ENST00000426936 936 ntBASIC21.15■□□□□ 0.98
SWSAP1Q6NVH7 AC012618.3-202ENST00000440004 472 ntTSL 4 BASIC21.15■□□□□ 0.98
SWSAP1Q6NVH7 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC21.15■□□□□ 0.98
SWSAP1Q6NVH7 AC063952.2-201ENST00000498792 1227 ntBASIC21.15■□□□□ 0.98
SWSAP1Q6NVH7 LTBR-211ENST00000543190 785 ntTSL 3 BASIC21.15■□□□□ 0.98
SWSAP1Q6NVH7 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
SWSAP1Q6NVH7 AC079385.1-202ENST00000549203 569 ntTSL 4 BASIC21.15■□□□□ 0.98
SWSAP1Q6NVH7 ELAC2-212ENST00000578071 579 ntTSL 4 BASIC21.15■□□□□ 0.98
SWSAP1Q6NVH7 NT5C-211ENST00000582170 653 ntTSL 3 BASIC21.15■□□□□ 0.98
SWSAP1Q6NVH7 OBP2B-205ENST00000618116 961 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
SWSAP1Q6NVH7 AL023973.1-201ENST00000624619 620 ntBASIC21.15■□□□□ 0.98
SWSAP1Q6NVH7 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
SWSAP1Q6NVH7 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
SWSAP1Q6NVH7 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC21.15■□□□□ 0.98
SWSAP1Q6NVH7 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
SWSAP1Q6NVH7 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
SWSAP1Q6NVH7 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
SWSAP1Q6NVH7 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
SWSAP1Q6NVH7 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
SWSAP1Q6NVH7 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC21.14■□□□□ 0.98
SWSAP1Q6NVH7 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
SWSAP1Q6NVH7 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.97
SWSAP1Q6NVH7 AZU1-201ENST00000233997 908 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
SWSAP1Q6NVH7 RHEBL1-201ENST00000301068 1210 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
SWSAP1Q6NVH7 PIEZO1-202ENST00000327397 1246 ntTSL 2 BASIC21.14■□□□□ 0.97
SWSAP1Q6NVH7 UBL5-201ENST00000358666 513 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
SWSAP1Q6NVH7 GUK1-204ENST00000366721 689 ntTSL 3 BASIC21.14■□□□□ 0.97
SWSAP1Q6NVH7 AL023284.2-201ENST00000405850 579 ntBASIC21.14■□□□□ 0.97
SWSAP1Q6NVH7 AC004540.1-203ENST00000421862 907 ntTSL 5 BASIC21.14■□□□□ 0.97
SWSAP1Q6NVH7 AC007731.5-201ENST00000429594 644 ntAPPRIS P1 TSL 5 BASIC21.14■□□□□ 0.97
SWSAP1Q6NVH7 AL513320.1-201ENST00000435049 622 ntTSL 3 BASIC21.14■□□□□ 0.97
SWSAP1Q6NVH7 AC009947.2-201ENST00000444014 672 ntBASIC21.14■□□□□ 0.97
SWSAP1Q6NVH7 MIR1302-2HG-202ENST00000473358 712 ntTSL 5 BASIC21.14■□□□□ 0.97
SWSAP1Q6NVH7 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.97
SWSAP1Q6NVH7 AP006621.4-201ENST00000527021 532 ntTSL 5 BASIC21.14■□□□□ 0.97
SWSAP1Q6NVH7 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC21.14■□□□□ 0.97
SWSAP1Q6NVH7 CR769767.2-201ENST00000622735 460 ntBASIC21.14■□□□□ 0.97
SWSAP1Q6NVH7 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
SWSAP1Q6NVH7 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC21.14■□□□□ 0.97
SWSAP1Q6NVH7 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC21.14■□□□□ 0.97
SWSAP1Q6NVH7 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC21.14■□□□□ 0.97
SWSAP1Q6NVH7 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC21.14■□□□□ 0.97
SWSAP1Q6NVH7 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC21.14■□□□□ 0.97
SWSAP1Q6NVH7 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
SWSAP1Q6NVH7 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
SWSAP1Q6NVH7 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.97
SWSAP1Q6NVH7 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC21.13■□□□□ 0.97
SWSAP1Q6NVH7 KLHL14-201ENST00000358095 1884 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
SWSAP1Q6NVH7 UBQLN4P1-201ENST00000461599 1801 ntBASIC21.13■□□□□ 0.97
SWSAP1Q6NVH7 LINC01586-201ENST00000506090 1840 ntTSL 2 BASIC21.13■□□□□ 0.97
SWSAP1Q6NVH7 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
SWSAP1Q6NVH7 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC21.13■□□□□ 0.97
SWSAP1Q6NVH7 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC21.13■□□□□ 0.97
SWSAP1Q6NVH7 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
SWSAP1Q6NVH7 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 32.9 ms