Protein–RNA interactions for Protein: Q5T4S7

UBR4, E3 ubiquitin-protein ligase UBR4, humanhuman

Predictions only

Length 5,183 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4Q5T4S7 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC10.4□□□□□ -0.74
UBR4Q5T4S7 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
UBR4Q5T4S7 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC10.4□□□□□ -0.74
UBR4Q5T4S7 VKORC1-201ENST00000300851 876 ntTSL 2 BASIC10.4□□□□□ -0.74
UBR4Q5T4S7 FAM99B-201ENST00000382166 1067 ntTSL 5 BASIC10.4□□□□□ -0.74
UBR4Q5T4S7 SELENOM-202ENST00000402395 1054 ntAPPRIS P2 TSL 1 (best) BASIC10.4□□□□□ -0.74
UBR4Q5T4S7 AL645941.1-201ENST00000415875 338 ntTSL 3 BASIC10.4□□□□□ -0.74
UBR4Q5T4S7 LINC01184-209ENST00000514573 609 ntTSL 3 BASIC10.4□□□□□ -0.74
UBR4Q5T4S7 CD4-210ENST00000541982 1187 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
UBR4Q5T4S7 FAM227B-204ENST00000558594 1139 ntAPPRIS ALT2 TSL 5 BASIC10.4□□□□□ -0.74
UBR4Q5T4S7 CDC42EP4-206ENST00000581014 737 ntTSL 5 BASIC10.4□□□□□ -0.74
UBR4Q5T4S7 ZFR2-208ENST00000592398 532 ntTSL 5 BASIC10.4□□□□□ -0.74
UBR4Q5T4S7 YTHDF3-AS1-201ENST00000603538 718 ntBASIC10.4□□□□□ -0.74
UBR4Q5T4S7 ARHGAP8-201ENST00000336963 1487 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
UBR4Q5T4S7 DLK2-203ENST00000372488 1590 ntAPPRIS P3 TSL 1 (best) BASIC10.4□□□□□ -0.74
UBR4Q5T4S7 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC10.4□□□□□ -0.74
UBR4Q5T4S7 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC10.4□□□□□ -0.74
UBR4Q5T4S7 NME2P1-201ENST00000426182 414 ntBASIC10.4□□□□□ -0.74
UBR4Q5T4S7 LACTB2-203ENST00000522447 1034 ntAPPRIS P1 TSL 2 BASIC10.4□□□□□ -0.74
UBR4Q5T4S7 AC004846.2-201ENST00000556578 777 ntTSL 3 BASIC10.4□□□□□ -0.74
UBR4Q5T4S7 RABAC1-208ENST00000601078 728 ntTSL 3 BASIC10.4□□□□□ -0.74
UBR4Q5T4S7 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC10.4□□□□□ -0.74
UBR4Q5T4S7 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
UBR4Q5T4S7 ABL2-203ENST00000392043 2140 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
UBR4Q5T4S7 PITX1-201ENST00000265340 2406 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
UBR4Q5T4S7 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC10.4□□□□□ -0.74
UBR4Q5T4S7 MRPS18A-202ENST00000372133 1062 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.75
UBR4Q5T4S7 DYNLL1-203ENST00000392509 814 ntAPPRIS P1 TSL 3 BASIC10.4□□□□□ -0.75
UBR4Q5T4S7 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC10.4□□□□□ -0.75
UBR4Q5T4S7 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC10.39□□□□□ -0.75
UBR4Q5T4S7 FOXP3-206ENST00000557224 1371 ntTSL 2 BASIC10.39□□□□□ -0.75
UBR4Q5T4S7 RTBDN-213ENST00000592204 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC10.39□□□□□ -0.75
UBR4Q5T4S7 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC10.39□□□□□ -0.75
UBR4Q5T4S7 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC10.39□□□□□ -0.75
UBR4Q5T4S7 YPEL5-205ENST00000402708 1735 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
UBR4Q5T4S7 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC10.39□□□□□ -0.75
UBR4Q5T4S7 AC083973.1-206ENST00000518213 815 ntTSL 3 BASIC10.39□□□□□ -0.75
UBR4Q5T4S7 MRPL49-203ENST00000526171 501 ntTSL 2 BASIC10.39□□□□□ -0.75
UBR4Q5T4S7 AQP6-203ENST00000551733 849 ntTSL 3 BASIC10.39□□□□□ -0.75
UBR4Q5T4S7 LINC01666-201ENST00000623794 845 ntTSL 5 BASIC10.39□□□□□ -0.75
UBR4Q5T4S7 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
UBR4Q5T4S7 AC011484.1-201ENST00000377652 1995 ntBASIC10.39□□□□□ -0.75
UBR4Q5T4S7 POU2F2-208ENST00000529952 1716 ntAPPRIS ALT2 TSL 1 (best) BASIC10.39□□□□□ -0.75
UBR4Q5T4S7 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
UBR4Q5T4S7 LCAT-201ENST00000264005 1507 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
UBR4Q5T4S7 PRKN-202ENST00000366892 1505 ntTSL 5 BASIC10.39□□□□□ -0.75
UBR4Q5T4S7 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC10.39□□□□□ -0.75
UBR4Q5T4S7 FIGLA-201ENST00000332372 722 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
UBR4Q5T4S7 TERF1P3-201ENST00000505638 1227 ntBASIC10.39□□□□□ -0.75
UBR4Q5T4S7 AC096582.2-201ENST00000510860 516 ntBASIC10.39□□□□□ -0.75
UBR4Q5T4S7 GNB5-211ENST00000560116 918 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
UBR4Q5T4S7 GABARAP-205ENST00000573928 476 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
UBR4Q5T4S7 AC008761.3-201ENST00000624803 892 ntBASIC10.39□□□□□ -0.75
UBR4Q5T4S7 WDR45-205ENST00000376358 1432 ntTSL 2 BASIC10.39□□□□□ -0.75
UBR4Q5T4S7 KRT8P20-201ENST00000423953 1409 ntBASIC10.39□□□□□ -0.75
UBR4Q5T4S7 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
UBR4Q5T4S7 AGTR1-203ENST00000404754 2252 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
UBR4Q5T4S7 TSPY16P-201ENST00000449843 468 ntBASIC10.39□□□□□ -0.75
UBR4Q5T4S7 GLRB-205ENST00000512619 728 ntTSL 3 BASIC10.39□□□□□ -0.75
UBR4Q5T4S7 AC015712.4-202ENST00000558641 1007 ntTSL 4 BASIC10.39□□□□□ -0.75
UBR4Q5T4S7 MIR3917-201ENST00000580971 93 ntBASIC10.39□□□□□ -0.75
UBR4Q5T4S7 IGFLR1-211ENST00000592889 782 ntAPPRIS ALT2 TSL 1 (best) BASIC10.39□□□□□ -0.75
UBR4Q5T4S7 SLC35G2-202ENST00000446465 2060 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
UBR4Q5T4S7 ZDHHC11-209ENST00000511539 1303 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
UBR4Q5T4S7 ZDHHC11B-204ENST00000622126 1301 ntTSL 5 BASIC10.39□□□□□ -0.75
UBR4Q5T4S7 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC10.39□□□□□ -0.75
UBR4Q5T4S7 STEAP1B-201ENST00000404369 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC10.39□□□□□ -0.75
UBR4Q5T4S7 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
UBR4Q5T4S7 IRX4-202ENST00000505790 2538 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
UBR4Q5T4S7 ANKHD1-221ENST00000616482 2064 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
UBR4Q5T4S7 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC10.39□□□□□ -0.75
UBR4Q5T4S7 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC10.38□□□□□ -0.75
UBR4Q5T4S7 MRPS16-201ENST00000372940 866 ntTSL 2 BASIC10.38□□□□□ -0.75
UBR4Q5T4S7 DARS-AS1-203ENST00000438432 768 ntTSL 3 BASIC10.38□□□□□ -0.75
UBR4Q5T4S7 AP001453.1-201ENST00000534988 923 ntTSL 3 BASIC10.38□□□□□ -0.75
UBR4Q5T4S7 RN7SL204P-201ENST00000582831 262 ntBASIC10.38□□□□□ -0.75
UBR4Q5T4S7 HDDC2-203ENST00000608284 538 ntTSL 3 BASIC10.38□□□□□ -0.75
UBR4Q5T4S7 MORF4L1-202ENST00000379535 2274 ntTSL 2 BASIC10.38□□□□□ -0.75
UBR4Q5T4S7 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
UBR4Q5T4S7 HDAC8-202ENST00000373556 704 ntTSL 2 BASIC10.38□□□□□ -0.75
UBR4Q5T4S7 MIR661-201ENST00000384842 89 ntBASIC10.38□□□□□ -0.75
UBR4Q5T4S7 PMS2P4-201ENST00000412466 1052 ntBASIC10.38□□□□□ -0.75
UBR4Q5T4S7 INGX-202ENST00000489074 768 ntBASIC10.38□□□□□ -0.75
UBR4Q5T4S7 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC10.38□□□□□ -0.75
UBR4Q5T4S7 AP000442.1-201ENST00000533552 769 ntTSL 5 BASIC10.38□□□□□ -0.75
UBR4Q5T4S7 COX5A-206ENST00000568783 571 ntTSL 3 BASIC10.38□□□□□ -0.75
UBR4Q5T4S7 METTL23-203ENST00000586738 1059 ntTSL 5 BASIC10.38□□□□□ -0.75
UBR4Q5T4S7 METTL23-205ENST00000588302 925 ntTSL 5 BASIC10.38□□□□□ -0.75
UBR4Q5T4S7 CHRNG-201ENST00000389492 1398 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
UBR4Q5T4S7 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC10.38□□□□□ -0.75
UBR4Q5T4S7 C19orf68-201ENST00000328759 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC10.38□□□□□ -0.75
UBR4Q5T4S7 CD82-202ENST00000342935 967 ntTSL 5 BASIC10.38□□□□□ -0.75
UBR4Q5T4S7 AL357497.1-201ENST00000436249 666 ntTSL 3 BASIC10.38□□□□□ -0.75
UBR4Q5T4S7 AC091182.1-202ENST00000518765 713 ntTSL 2 BASIC10.38□□□□□ -0.75
UBR4Q5T4S7 RPL10P19-202ENST00000520582 722 ntTSL 3 BASIC10.38□□□□□ -0.75
UBR4Q5T4S7 FANCA-204ENST00000534992 1088 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
UBR4Q5T4S7 SLC26A1-205ENST00000622731 1057 ntTSL 5 BASIC10.38□□□□□ -0.75
UBR4Q5T4S7 AC092865.6-201ENST00000642101 219 ntBASIC10.38□□□□□ -0.75
UBR4Q5T4S7 VPS37D-202ENST00000451519 1303 ntTSL 5 BASIC10.38□□□□□ -0.75
UBR4Q5T4S7 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Retrieved 100 of 98,524 protein–RNA pairs in 37.7 ms