Protein–RNA interactions for Protein: Q5JQF7

LINC01556, Putative uncharacterized protein encoded by LINC01556, humanhuman

Predictions only

Length 62 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01556Q5JQF7 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC12.92□□□□□ -0.34
LINC01556Q5JQF7 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
LINC01556Q5JQF7 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC12.92□□□□□ -0.34
LINC01556Q5JQF7 AL445686.2-201ENST00000577528 1445 ntTSL 3 BASIC12.92□□□□□ -0.34
LINC01556Q5JQF7 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC12.92□□□□□ -0.34
LINC01556Q5JQF7 CYP2D7-207ENST00000612115 1734 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
LINC01556Q5JQF7 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
LINC01556Q5JQF7 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC12.92□□□□□ -0.34
LINC01556Q5JQF7 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
LINC01556Q5JQF7 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
LINC01556Q5JQF7 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC12.92□□□□□ -0.34
LINC01556Q5JQF7 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
LINC01556Q5JQF7 FLT1-201ENST00000282397 7092 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
LINC01556Q5JQF7 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
LINC01556Q5JQF7 CD151-201ENST00000322008 1548 ntAPPRIS P2 TSL 1 (best) BASIC12.92□□□□□ -0.34
LINC01556Q5JQF7 SMAD4-201ENST00000342988 8769 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
LINC01556Q5JQF7 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
LINC01556Q5JQF7 AVPR1A-201ENST00000299178 5963 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
LINC01556Q5JQF7 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
LINC01556Q5JQF7 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC12.92□□□□□ -0.34
LINC01556Q5JQF7 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
LINC01556Q5JQF7 FAM118A-202ENST00000405673 1612 ntTSL 5 BASIC12.91□□□□□ -0.34
LINC01556Q5JQF7 C4orf32-201ENST00000309733 8901 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
LINC01556Q5JQF7 TFDP2-202ENST00000467072 1853 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
LINC01556Q5JQF7 MLST8-232ENST00000569417 1870 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
LINC01556Q5JQF7 EIF4G3-214ENST00000634879 5325 ntTSL 5 BASIC12.91□□□□□ -0.34
LINC01556Q5JQF7 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC12.91□□□□□ -0.34
LINC01556Q5JQF7 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC12.91□□□□□ -0.34
LINC01556Q5JQF7 IFRD1-201ENST00000005558 1834 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
LINC01556Q5JQF7 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC12.91□□□□□ -0.34
LINC01556Q5JQF7 PIN1-201ENST00000247970 997 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
LINC01556Q5JQF7 KRAS-201ENST00000256078 1119 ntAPPRIS P4 TSL 1 (best) BASIC12.91□□□□□ -0.34
LINC01556Q5JQF7 RABL2A-202ENST00000393165 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
LINC01556Q5JQF7 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
LINC01556Q5JQF7 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC12.91□□□□□ -0.34
LINC01556Q5JQF7 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
LINC01556Q5JQF7 CCR12P-201ENST00000446203 998 ntBASIC12.91□□□□□ -0.34
LINC01556Q5JQF7 AL365295.1-202ENST00000456100 562 ntTSL 4 BASIC12.91□□□□□ -0.34
LINC01556Q5JQF7 MIR1302-2HG-202ENST00000473358 712 ntTSL 5 BASIC12.91□□□□□ -0.34
LINC01556Q5JQF7 FDX2-206ENST00000492239 773 ntTSL 2 BASIC12.91□□□□□ -0.34
LINC01556Q5JQF7 HRASLS5-205ENST00000539221 1167 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
LINC01556Q5JQF7 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC12.91□□□□□ -0.34
LINC01556Q5JQF7 NAPSB-206ENST00000562112 1266 ntBASIC12.91□□□□□ -0.34
LINC01556Q5JQF7 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC12.91□□□□□ -0.34
LINC01556Q5JQF7 AC073912.3-201ENST00000624414 853 ntBASIC12.91□□□□□ -0.34
LINC01556Q5JQF7 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
LINC01556Q5JQF7 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC12.91□□□□□ -0.34
LINC01556Q5JQF7 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
LINC01556Q5JQF7 JAKMIP1-208ENST00000637373 1362 ntTSL 5 BASIC12.91□□□□□ -0.34
LINC01556Q5JQF7 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC12.91□□□□□ -0.34
LINC01556Q5JQF7 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
LINC01556Q5JQF7 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
LINC01556Q5JQF7 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
LINC01556Q5JQF7 EVPL-202ENST00000586740 6223 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
LINC01556Q5JQF7 AC004890.2-202ENST00000463462 1494 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
LINC01556Q5JQF7 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
LINC01556Q5JQF7 GPR137-204ENST00000438980 1596 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
LINC01556Q5JQF7 GPR42-201ENST00000454971 1804 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
LINC01556Q5JQF7 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC12.9□□□□□ -0.34
LINC01556Q5JQF7 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC12.9□□□□□ -0.34
LINC01556Q5JQF7 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC12.9□□□□□ -0.34
LINC01556Q5JQF7 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
LINC01556Q5JQF7 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC12.9□□□□□ -0.34
LINC01556Q5JQF7 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
LINC01556Q5JQF7 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
LINC01556Q5JQF7 PLAUR-203ENST00000340093 1548 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
LINC01556Q5JQF7 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC12.9□□□□□ -0.34
LINC01556Q5JQF7 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
LINC01556Q5JQF7 HCRT-201ENST00000293330 577 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
LINC01556Q5JQF7 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
LINC01556Q5JQF7 FAM182B-202ENST00000376404 456 ntAPPRIS ALT2 BASIC12.9□□□□□ -0.34
LINC01556Q5JQF7 COL11A2-204ENST00000395194 1194 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
LINC01556Q5JQF7 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
LINC01556Q5JQF7 AQP12B-201ENST00000407834 1094 ntAPPRIS P2 TSL 1 (best) BASIC12.9□□□□□ -0.34
LINC01556Q5JQF7 AL390955.1-201ENST00000428694 934 ntBASIC12.9□□□□□ -0.34
LINC01556Q5JQF7 LTB-210ENST00000429299 897 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
LINC01556Q5JQF7 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
LINC01556Q5JQF7 GXYLT1P3-201ENST00000453058 1193 ntBASIC12.9□□□□□ -0.34
LINC01556Q5JQF7 MNX1-AS1-201ENST00000480284 1041 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
LINC01556Q5JQF7 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
LINC01556Q5JQF7 L34079.3-201ENST00000600242 546 ntTSL 4 BASIC12.9□□□□□ -0.34
LINC01556Q5JQF7 CCDC28A-203ENST00000617445 1240 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
LINC01556Q5JQF7 ABHD14B-202ENST00000361143 1636 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
LINC01556Q5JQF7 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC12.9□□□□□ -0.34
LINC01556Q5JQF7 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
LINC01556Q5JQF7 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC12.9□□□□□ -0.34
LINC01556Q5JQF7 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC12.9□□□□□ -0.34
LINC01556Q5JQF7 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
LINC01556Q5JQF7 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
LINC01556Q5JQF7 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC12.9□□□□□ -0.34
LINC01556Q5JQF7 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC12.9□□□□□ -0.34
LINC01556Q5JQF7 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC12.9□□□□□ -0.34
LINC01556Q5JQF7 CRYZL1-203ENST00000381540 1482 ntTSL 2 BASIC12.9□□□□□ -0.34
LINC01556Q5JQF7 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC12.9□□□□□ -0.34
LINC01556Q5JQF7 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC12.9□□□□□ -0.34
LINC01556Q5JQF7 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
LINC01556Q5JQF7 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC12.9□□□□□ -0.35
LINC01556Q5JQF7 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.35
LINC01556Q5JQF7 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.35
LINC01556Q5JQF7 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC12.9□□□□□ -0.35
Retrieved 100 of 98,524 protein–RNA pairs in 41.4 ms