Protein–RNA interactions for Protein: Q2I0M5

RSPO4, R-spondin-4, humanhuman

Predicted RBP Predictions only

Length 234 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO4Q2I0M5 AC055811.1-201ENST00000584203 1231 ntTSL 5 BASIC18.39■□□□□ 0.53
RSPO4Q2I0M5 CLEC11A-203ENST00000617718 1128 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
RSPO4Q2I0M5 CLN3-216ENST00000565316 1318 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
RSPO4Q2I0M5 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
RSPO4Q2I0M5 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC18.39■□□□□ 0.53
RSPO4Q2I0M5 FEM1AP4-201ENST00000443167 1987 ntBASIC18.39■□□□□ 0.53
RSPO4Q2I0M5 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
RSPO4Q2I0M5 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
RSPO4Q2I0M5 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC18.39■□□□□ 0.53
RSPO4Q2I0M5 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC18.39■□□□□ 0.53
RSPO4Q2I0M5 OLIG2-202ENST00000382357 2578 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
RSPO4Q2I0M5 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC18.38■□□□□ 0.53
RSPO4Q2I0M5 ODC1-201ENST00000234111 2653 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
RSPO4Q2I0M5 TNFRSF19-202ENST00000382258 1625 ntAPPRIS P4 TSL 1 (best) BASIC18.38■□□□□ 0.53
RSPO4Q2I0M5 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
RSPO4Q2I0M5 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
RSPO4Q2I0M5 LAMTOR5-201ENST00000256644 868 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
RSPO4Q2I0M5 ATP6V0C-201ENST00000330398 1175 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
RSPO4Q2I0M5 TBPL1-203ENST00000367871 808 ntTSL 2 BASIC18.38■□□□□ 0.53
RSPO4Q2I0M5 TEX30-206ENST00000376032 1165 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
RSPO4Q2I0M5 DYNLL1-203ENST00000392509 814 ntAPPRIS P1 TSL 3 BASIC18.38■□□□□ 0.53
RSPO4Q2I0M5 RPP14-206ENST00000466547 805 ntAPPRIS P1 TSL 3 BASIC18.38■□□□□ 0.53
RSPO4Q2I0M5 LAMTOR5-204ENST00000483260 694 ntTSL 2 BASIC18.38■□□□□ 0.53
RSPO4Q2I0M5 BOC-211ENST00000484034 1286 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
RSPO4Q2I0M5 FLT3LG-206ENST00000597551 951 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
RSPO4Q2I0M5 LAMTOR5-206ENST00000602318 634 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
RSPO4Q2I0M5 AL049840.3-201ENST00000602669 611 ntBASIC18.38■□□□□ 0.53
RSPO4Q2I0M5 CCNC-219ENST00000627680 896 ntTSL 5 BASIC18.38■□□□□ 0.53
RSPO4Q2I0M5 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
RSPO4Q2I0M5 LINC02138-201ENST00000378340 1326 ntTSL 2 BASIC18.38■□□□□ 0.53
RSPO4Q2I0M5 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
RSPO4Q2I0M5 ABHD14B-204ENST00000461108 1397 ntTSL 2 BASIC18.38■□□□□ 0.53
RSPO4Q2I0M5 RBFADN-201ENST00000562391 1350 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
RSPO4Q2I0M5 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
RSPO4Q2I0M5 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
RSPO4Q2I0M5 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
RSPO4Q2I0M5 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
RSPO4Q2I0M5 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC18.38■□□□□ 0.53
RSPO4Q2I0M5 TMEM175-220ENST00000515740 1514 ntTSL 3 BASIC18.38■□□□□ 0.53
RSPO4Q2I0M5 CENPT-215ENST00000564817 1638 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
RSPO4Q2I0M5 CYP2D7-201ENST00000358097 1655 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
RSPO4Q2I0M5 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC18.37■□□□□ 0.53
RSPO4Q2I0M5 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
RSPO4Q2I0M5 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC18.37■□□□□ 0.53
RSPO4Q2I0M5 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
RSPO4Q2I0M5 GHSR-201ENST00000241256 1172 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
RSPO4Q2I0M5 ADIPOR1-202ENST00000367254 1116 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
RSPO4Q2I0M5 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC18.37■□□□□ 0.53
RSPO4Q2I0M5 MRPS12-203ENST00000407800 1220 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
RSPO4Q2I0M5 AC005056.1-201ENST00000435932 532 ntTSL 4 BASIC18.37■□□□□ 0.53
RSPO4Q2I0M5 TTTY14-203ENST00000447937 920 ntTSL 3 BASIC18.37■□□□□ 0.53
RSPO4Q2I0M5 CT47A11-201ENST00000457020 1294 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
RSPO4Q2I0M5 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
RSPO4Q2I0M5 HOXB-AS2-201ENST00000464382 845 ntTSL 4 BASIC18.37■□□□□ 0.53
RSPO4Q2I0M5 SEC1P-202ENST00000473944 940 ntBASIC18.37■□□□□ 0.53
RSPO4Q2I0M5 DHDH-204ENST00000523250 634 ntTSL 5 BASIC18.37■□□□□ 0.53
RSPO4Q2I0M5 AP005233.2-201ENST00000561588 372 ntTSL 3 BASIC18.37■□□□□ 0.53
RSPO4Q2I0M5 IGHV3OR16-7-201ENST00000604106 360 ntBASIC18.37■□□□□ 0.53
RSPO4Q2I0M5 AC243547.2-201ENST00000616257 234 ntTSL 3 BASIC18.37■□□□□ 0.53
RSPO4Q2I0M5 TSPY4-205ENST00000640033 663 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
RSPO4Q2I0M5 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
RSPO4Q2I0M5 WDR45-206ENST00000376368 1381 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
RSPO4Q2I0M5 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
RSPO4Q2I0M5 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC18.37■□□□□ 0.53
RSPO4Q2I0M5 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
RSPO4Q2I0M5 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
RSPO4Q2I0M5 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
RSPO4Q2I0M5 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
RSPO4Q2I0M5 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
RSPO4Q2I0M5 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
RSPO4Q2I0M5 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC18.36■□□□□ 0.53
RSPO4Q2I0M5 CERS4-201ENST00000251363 1797 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
RSPO4Q2I0M5 TMEM59L-201ENST00000262817 1613 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
RSPO4Q2I0M5 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC18.36■□□□□ 0.53
RSPO4Q2I0M5 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
RSPO4Q2I0M5 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
RSPO4Q2I0M5 VIPR2-202ENST00000377633 1491 ntTSL 2 BASIC18.36■□□□□ 0.53
RSPO4Q2I0M5 CRYBB2P1-202ENST00000382734 1364 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
RSPO4Q2I0M5 VKORC1-205ENST00000394975 1012 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
RSPO4Q2I0M5 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
RSPO4Q2I0M5 GPX1P2-201ENST00000429271 606 ntBASIC18.36■□□□□ 0.53
RSPO4Q2I0M5 AP000355.1-201ENST00000432032 480 ntTSL 5 BASIC18.36■□□□□ 0.53
RSPO4Q2I0M5 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC18.36■□□□□ 0.53
RSPO4Q2I0M5 FIBP-212ENST00000533045 1173 ntTSL 5 BASIC18.36■□□□□ 0.53
RSPO4Q2I0M5 IRF8-202ENST00000562492 946 ntTSL 3 BASIC18.36■□□□□ 0.53
RSPO4Q2I0M5 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC18.36■□□□□ 0.53
RSPO4Q2I0M5 MIR3687-2-201ENST00000577708 61 ntBASIC18.36■□□□□ 0.53
RSPO4Q2I0M5 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC18.36■□□□□ 0.53
RSPO4Q2I0M5 AC005332.3-201ENST00000589904 676 ntBASIC18.36■□□□□ 0.53
RSPO4Q2I0M5 AC012615.3-201ENST00000592884 500 ntTSL 3 BASIC18.36■□□□□ 0.53
RSPO4Q2I0M5 AC005256.1-202ENST00000592934 415 ntTSL 2 BASIC18.36■□□□□ 0.53
RSPO4Q2I0M5 DNASE1L2-206ENST00000613572 1260 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
RSPO4Q2I0M5 MIR3687-1-201ENST00000614492 61 ntBASIC18.36■□□□□ 0.53
RSPO4Q2I0M5 HSP90B1-211ENST00000640977 1127 ntTSL 5 BASIC18.36■□□□□ 0.53
RSPO4Q2I0M5 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
RSPO4Q2I0M5 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
RSPO4Q2I0M5 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC18.35■□□□□ 0.53
RSPO4Q2I0M5 MRPL3-201ENST00000264995 1706 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
RSPO4Q2I0M5 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC18.35■□□□□ 0.53
RSPO4Q2I0M5 APBB1IP-201ENST00000356785 1513 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 31.3 ms