Protein–RNA interactions for Protein: Q07092

COL16A1, Collagen alpha-1(XVI) chain, humanhuman

Predicted RBP Predictions only

Length 1,604 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL16A1Q07092 CD19-206ENST00000567541 1707 ntAPPRIS ALT2 TSL 1 (best) BASIC25.68■■□□□ 1.7
COL16A1Q07092 WRB-201ENST00000333781 1616 ntAPPRIS P1 TSL 1 (best) BASIC25.68■■□□□ 1.7
COL16A1Q07092 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC25.68■■□□□ 1.7
COL16A1Q07092 MAFG-202ENST00000392366 1743 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
COL16A1Q07092 MYB-221ENST00000527615 2381 ntTSL 5 BASIC25.67■■□□□ 1.7
COL16A1Q07092 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC25.67■■□□□ 1.7
COL16A1Q07092 AP000763.4-201ENST00000544674 752 ntTSL 5 BASIC25.67■■□□□ 1.7
COL16A1Q07092 BEAN1-203ENST00000561796 1078 ntAPPRIS P2 TSL 1 (best) BASIC25.67■■□□□ 1.7
COL16A1Q07092 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC25.67■■□□□ 1.7
COL16A1Q07092 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC25.67■■□□□ 1.7
COL16A1Q07092 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
COL16A1Q07092 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC25.67■■□□□ 1.7
COL16A1Q07092 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC25.67■■□□□ 1.7
COL16A1Q07092 GPANK1-201ENST00000375893 1598 ntAPPRIS P1 TSL 5 BASIC25.67■■□□□ 1.7
COL16A1Q07092 DGUOK-201ENST00000264093 1144 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
COL16A1Q07092 DGUOK-202ENST00000348222 880 ntTSL 2 BASIC25.66■■□□□ 1.7
COL16A1Q07092 RPS8P6-201ENST00000426177 609 ntBASIC25.66■■□□□ 1.7
COL16A1Q07092 C21orf33-205ENST00000427803 1077 ntTSL 2 BASIC25.66■■□□□ 1.7
COL16A1Q07092 DGUOK-208ENST00000629438 1029 ntTSL 1 (best) BASIC25.66■■□□□ 1.7
COL16A1Q07092 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC25.66■■□□□ 1.7
COL16A1Q07092 FOXP3-201ENST00000376197 1326 ntTSL 2 BASIC25.66■■□□□ 1.7
COL16A1Q07092 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC25.66■■□□□ 1.7
COL16A1Q07092 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC25.66■■□□□ 1.7
COL16A1Q07092 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC25.66■■□□□ 1.7
COL16A1Q07092 LBH-204ENST00000406087 559 ntTSL 4 BASIC25.66■■□□□ 1.7
COL16A1Q07092 FGFR3P6-201ENST00000457012 610 ntBASIC25.66■■□□□ 1.7
COL16A1Q07092 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC25.66■■□□□ 1.7
COL16A1Q07092 SPINT1-AS1-203ENST00000565315 629 ntTSL 2 BASIC25.66■■□□□ 1.7
COL16A1Q07092 STXBP2-222ENST00000612033 1188 ntTSL 5 BASIC25.66■■□□□ 1.7
COL16A1Q07092 HNF1B-206ENST00000620125 1103 ntTSL 5 BASIC25.66■■□□□ 1.7
COL16A1Q07092 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC25.66■■□□□ 1.7
COL16A1Q07092 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
COL16A1Q07092 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC25.66■■□□□ 1.7
COL16A1Q07092 EGR4-202ENST00000545030 2372 ntAPPRIS P2 TSL 1 (best) BASIC25.66■■□□□ 1.7
COL16A1Q07092 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC25.66■■□□□ 1.7
COL16A1Q07092 NPAS3-203ENST00000357798 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC25.65■■□□□ 1.7
COL16A1Q07092 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC25.65■■□□□ 1.7
COL16A1Q07092 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC25.65■■□□□ 1.7
COL16A1Q07092 SMN1-204ENST00000506163 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC25.65■■□□□ 1.7
COL16A1Q07092 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
COL16A1Q07092 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC25.65■■□□□ 1.7
COL16A1Q07092 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC25.65■■□□□ 1.7
COL16A1Q07092 FCGRT-210ENST00000596975 1054 ntTSL 5 BASIC25.65■■□□□ 1.7
COL16A1Q07092 L34079.3-201ENST00000600242 546 ntTSL 4 BASIC25.65■■□□□ 1.7
COL16A1Q07092 AC027601.4-201ENST00000611259 610 ntBASIC25.65■■□□□ 1.7
COL16A1Q07092 AC116407.3-201ENST00000623905 1129 ntBASIC25.65■■□□□ 1.7
COL16A1Q07092 PSMA6-216ENST00000627895 484 ntTSL 5 BASIC25.65■■□□□ 1.7
COL16A1Q07092 G6PD-202ENST00000393562 2631 ntAPPRIS P3 TSL 1 (best) BASIC25.65■■□□□ 1.7
COL16A1Q07092 G6PD-211ENST00000621232 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC25.65■■□□□ 1.7
COL16A1Q07092 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC25.65■■□□□ 1.7
COL16A1Q07092 WDR45-205ENST00000376358 1432 ntTSL 2 BASIC25.64■■□□□ 1.7
COL16A1Q07092 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC25.64■■□□□ 1.7
COL16A1Q07092 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC25.64■■□□□ 1.7
COL16A1Q07092 TSPY3-202ENST00000440483 414 ntTSL 5 BASIC25.64■■□□□ 1.7
COL16A1Q07092 KIRREL3-AS1-201ENST00000548204 586 ntTSL 3 BASIC25.64■■□□□ 1.7
COL16A1Q07092 CAND2-206ENST00000626378 333 ntTSL 5 BASIC25.64■■□□□ 1.7
COL16A1Q07092 AC064853.6-201ENST00000642029 303 ntAPPRIS P1 BASIC25.64■■□□□ 1.7
COL16A1Q07092 CDC25B-202ENST00000340833 1978 ntAPPRIS ALT2 TSL 1 (best) BASIC25.64■■□□□ 1.7
COL16A1Q07092 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.7
COL16A1Q07092 AC005329.3-201ENST00000626781 1366 ntTSL 5 BASIC25.64■■□□□ 1.69
COL16A1Q07092 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC25.64■■□□□ 1.69
COL16A1Q07092 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC25.64■■□□□ 1.69
COL16A1Q07092 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC25.63■■□□□ 1.69
COL16A1Q07092 MBOAT7-205ENST00000431666 2471 ntTSL 1 (best) BASIC25.63■■□□□ 1.69
COL16A1Q07092 TM2D1-201ENST00000294613 1250 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
COL16A1Q07092 TM2D1-204ENST00000371180 1248 ntTSL 5 BASIC25.63■■□□□ 1.69
COL16A1Q07092 DNAJB3-202ENST00000449667 1266 ntBASIC25.63■■□□□ 1.69
COL16A1Q07092 CD63-204ENST00000546939 779 ntTSL 3 BASIC25.63■■□□□ 1.69
COL16A1Q07092 AC025162.1-201ENST00000554022 565 ntTSL 4 BASIC25.63■■□□□ 1.69
COL16A1Q07092 TM2D1-212ENST00000606498 969 ntAPPRIS P1 TSL 5 BASIC25.63■■□□□ 1.69
COL16A1Q07092 AL157832.3-201ENST00000635764 1005 ntTSL 5 BASIC25.63■■□□□ 1.69
COL16A1Q07092 CCT6P1-202ENST00000442266 1317 ntTSL 2 BASIC25.63■■□□□ 1.69
COL16A1Q07092 STAP2-201ENST00000594605 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC25.63■■□□□ 1.69
COL16A1Q07092 IDH3G-201ENST00000217901 1485 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
COL16A1Q07092 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
COL16A1Q07092 MRPL52-202ENST00000355151 1118 ntAPPRIS ALT1 TSL 1 (best) BASIC25.63■■□□□ 1.69
COL16A1Q07092 ASGR1-202ENST00000380920 944 ntTSL 3 BASIC25.63■■□□□ 1.69
COL16A1Q07092 MRPL52-203ENST00000397496 1111 ntAPPRIS P3 TSL 2 BASIC25.63■■□□□ 1.69
COL16A1Q07092 TMEM213-202ENST00000413208 480 ntAPPRIS ALT2 TSL 3 BASIC25.63■■□□□ 1.69
COL16A1Q07092 AL355877.3-201ENST00000622820 899 ntBASIC25.63■■□□□ 1.69
COL16A1Q07092 AC134684.3-201ENST00000641758 218 ntBASIC25.63■■□□□ 1.69
COL16A1Q07092 RPS6KB1-204ENST00000443572 1913 ntTSL 2 BASIC25.63■■□□□ 1.69
COL16A1Q07092 AC104109.2-201ENST00000602919 1418 ntBASIC25.62■■□□□ 1.69
COL16A1Q07092 EEF1AKMT2-201ENST00000368836 1462 ntAPPRIS P1 TSL 1 (best) BASIC25.62■■□□□ 1.69
COL16A1Q07092 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC25.62■■□□□ 1.69
COL16A1Q07092 WDR18-202ENST00000585809 1608 ntAPPRIS P1 TSL 1 (best) BASIC25.62■■□□□ 1.69
COL16A1Q07092 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC25.62■■□□□ 1.69
COL16A1Q07092 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC25.62■■□□□ 1.69
COL16A1Q07092 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC25.62■■□□□ 1.69
COL16A1Q07092 AL022314.1-201ENST00000414203 464 ntTSL 5 BASIC25.62■■□□□ 1.69
COL16A1Q07092 AL591424.1-201ENST00000442569 1213 ntBASIC25.62■■□□□ 1.69
COL16A1Q07092 SMIM27-204ENST00000453396 1003 ntAPPRIS ALT2 TSL 3 BASIC25.62■■□□□ 1.69
COL16A1Q07092 SART3-203ENST00000546611 1184 ntBASIC25.62■■□□□ 1.69
COL16A1Q07092 AL449423.1-201ENST00000578935 435 ntTSL 3 BASIC25.62■■□□□ 1.69
COL16A1Q07092 DYRK1B-204ENST00000593685 2724 ntAPPRIS P3 TSL 5 BASIC25.62■■□□□ 1.69
COL16A1Q07092 LGALS12-201ENST00000255684 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC25.62■■□□□ 1.69
COL16A1Q07092 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC25.62■■□□□ 1.69
COL16A1Q07092 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC25.62■■□□□ 1.69
COL16A1Q07092 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC25.62■■□□□ 1.69
COL16A1Q07092 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC25.61■■□□□ 1.69
Retrieved 100 of 98,524 protein–RNA pairs in 37.9 ms