Protein–RNA interactions for Protein: P60468

SEC61B, Protein transport protein Sec61 subunit beta, humanhuman

Known RBP Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61BP60468 GPR42-201ENST00000454971 1804 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
SEC61BP60468 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
SEC61BP60468 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC10.21□□□□□ -0.78
SEC61BP60468 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
SEC61BP60468 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC10.21□□□□□ -0.78
SEC61BP60468 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC10.21□□□□□ -0.78
SEC61BP60468 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC10.21□□□□□ -0.78
SEC61BP60468 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC10.21□□□□□ -0.78
SEC61BP60468 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
SEC61BP60468 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC10.21□□□□□ -0.78
SEC61BP60468 DAG1-201ENST00000308775 5522 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
SEC61BP60468 MAPK8IP3-201ENST00000250894 5661 ntAPPRIS P3 TSL 1 (best) BASIC10.2□□□□□ -0.78
SEC61BP60468 TMEM132D-202ENST00000422113 5776 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
SEC61BP60468 UNC13A-205ENST00000551649 6052 ntAPPRIS ALT2 TSL 5 BASIC10.2□□□□□ -0.78
SEC61BP60468 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
SEC61BP60468 IGLL1-201ENST00000249053 716 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
SEC61BP60468 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC10.2□□□□□ -0.78
SEC61BP60468 ISCA1-202ENST00000326094 1264 ntTSL 3 BASIC10.2□□□□□ -0.78
SEC61BP60468 NDUFA1-201ENST00000371437 766 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
SEC61BP60468 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC10.2□□□□□ -0.78
SEC61BP60468 AC115618.1-201ENST00000376775 549 ntTSL 3 BASIC10.2□□□□□ -0.78
SEC61BP60468 TNFRSF10C-202ENST00000397703 1242 ntTSL 2 BASIC10.2□□□□□ -0.78
SEC61BP60468 GAL3ST1-206ENST00000406955 1635 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
SEC61BP60468 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
SEC61BP60468 METTL5-207ENST00000410097 1370 ntTSL 2 BASIC10.2□□□□□ -0.78
SEC61BP60468 KRT18P48-201ENST00000434763 852 ntBASIC10.2□□□□□ -0.78
SEC61BP60468 TMA7-201ENST00000438607 561 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
SEC61BP60468 AC112907.2-201ENST00000448639 330 ntBASIC10.2□□□□□ -0.78
SEC61BP60468 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC10.2□□□□□ -0.78
SEC61BP60468 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC10.2□□□□□ -0.78
SEC61BP60468 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC10.2□□□□□ -0.78
SEC61BP60468 AF186192.2-201ENST00000524514 423 ntTSL 3 BASIC10.2□□□□□ -0.78
SEC61BP60468 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC10.2□□□□□ -0.78
SEC61BP60468 FOSL1-203ENST00000531493 1200 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
SEC61BP60468 C17orf49-208ENST00000552402 760 ntTSL 2 BASIC10.2□□□□□ -0.78
SEC61BP60468 ZNF444P1-201ENST00000559497 298 ntBASIC10.2□□□□□ -0.78
SEC61BP60468 PPP4C-202ENST00000561610 1333 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
SEC61BP60468 AL136038.3-201ENST00000561909 1096 ntBASIC10.2□□□□□ -0.78
SEC61BP60468 AC016582.2-201ENST00000591908 446 ntTSL 3 BASIC10.2□□□□□ -0.78
SEC61BP60468 LINC01785-201ENST00000598042 1112 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
SEC61BP60468 GPX4-210ENST00000611653 793 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
SEC61BP60468 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC10.2□□□□□ -0.78
SEC61BP60468 AL691432.3-201ENST00000621860 400 ntBASIC10.2□□□□□ -0.78
SEC61BP60468 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC10.2□□□□□ -0.78
SEC61BP60468 CROCCP3-201ENST00000263511 5368 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
SEC61BP60468 KCNC1-202ENST00000379472 7965 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
SEC61BP60468 PTPRF-209ENST00000438120 6377 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
SEC61BP60468 WDR13-202ENST00000376729 5469 ntAPPRIS P1 TSL 5 BASIC10.2□□□□□ -0.78
SEC61BP60468 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC10.19□□□□□ -0.78
SEC61BP60468 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC10.19□□□□□ -0.78
SEC61BP60468 HAUS3-202ENST00000443786 2430 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
SEC61BP60468 ASB1-201ENST00000264607 6994 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
SEC61BP60468 KIAA2026-202ENST00000399933 6988 ntAPPRIS P1 TSL 5 BASIC10.19□□□□□ -0.78
SEC61BP60468 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC10.19□□□□□ -0.78
SEC61BP60468 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC10.19□□□□□ -0.78
SEC61BP60468 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
SEC61BP60468 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
SEC61BP60468 PCMT1-203ENST00000367384 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC10.19□□□□□ -0.78
SEC61BP60468 GLCCI1-201ENST00000223145 4743 ntAPPRIS P2 TSL 1 (best) BASIC10.19□□□□□ -0.78
SEC61BP60468 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
SEC61BP60468 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC10.19□□□□□ -0.78
SEC61BP60468 NRXN1-205ENST00000401710 2873 ntTSL 5 BASIC10.19□□□□□ -0.78
SEC61BP60468 LINC01311-201ENST00000565162 1445 ntBASIC10.19□□□□□ -0.78
SEC61BP60468 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
SEC61BP60468 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC10.19□□□□□ -0.78
SEC61BP60468 MED30-201ENST00000297347 985 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
SEC61BP60468 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
SEC61BP60468 SLX1A-202ENST00000345535 762 ntAPPRIS ALT2 TSL 1 (best) BASIC10.19□□□□□ -0.78
SEC61BP60468 SLX1B-202ENST00000351581 762 ntAPPRIS ALT2 TSL 1 (best) BASIC10.19□□□□□ -0.78
SEC61BP60468 IPPK-202ENST00000375522 882 ntTSL 3 BASIC10.19□□□□□ -0.78
SEC61BP60468 COPS8-203ENST00000409334 794 ntTSL 5 BASIC10.19□□□□□ -0.78
SEC61BP60468 AC093901.1-201ENST00000414886 778 ntTSL 5 BASIC10.19□□□□□ -0.78
SEC61BP60468 GRAMD4P1-201ENST00000435181 1110 ntBASIC10.19□□□□□ -0.78
SEC61BP60468 SNX5-210ENST00000481323 562 ntTSL 3 BASIC10.19□□□□□ -0.78
SEC61BP60468 PP7080-204ENST00000510714 601 ntTSL 3 BASIC10.19□□□□□ -0.78
SEC61BP60468 CNTD2-203ENST00000513948 787 ntAPPRIS ALT2 TSL 2 BASIC10.19□□□□□ -0.78
SEC61BP60468 LY6E-209ENST00000521003 740 ntAPPRIS P2 TSL 2 BASIC10.19□□□□□ -0.78
SEC61BP60468 AC004080.2-201ENST00000523331 556 ntTSL 4 BASIC10.19□□□□□ -0.78
SEC61BP60468 NDUFV2-AS1-203ENST00000608008 779 ntBASIC10.19□□□□□ -0.78
SEC61BP60468 MARCH1-203ENST00000503008 5877 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
SEC61BP60468 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC10.19□□□□□ -0.78
SEC61BP60468 SAYSD1-201ENST00000229903 2020 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
SEC61BP60468 CCDC127-201ENST00000296824 9342 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
SEC61BP60468 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC10.19□□□□□ -0.78
SEC61BP60468 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC10.19□□□□□ -0.78
SEC61BP60468 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC10.19□□□□□ -0.78
SEC61BP60468 TRIL-201ENST00000539664 4935 ntAPPRIS P1 BASIC10.18□□□□□ -0.78
SEC61BP60468 TNFRSF19-202ENST00000382258 1625 ntAPPRIS P4 TSL 1 (best) BASIC10.18□□□□□ -0.78
SEC61BP60468 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC10.18□□□□□ -0.78
SEC61BP60468 C21orf91-203ENST00000400559 1593 ntAPPRIS ALT1 TSL 5 BASIC10.18□□□□□ -0.78
SEC61BP60468 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC10.18□□□□□ -0.78
SEC61BP60468 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC10.18□□□□□ -0.78
SEC61BP60468 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
SEC61BP60468 NR1H2-202ENST00000411902 1466 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
SEC61BP60468 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC10.18□□□□□ -0.78
SEC61BP60468 KCNA7-201ENST00000221444 4372 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
SEC61BP60468 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
SEC61BP60468 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC10.18□□□□□ -0.78
SEC61BP60468 RNF113B-201ENST00000267291 1376 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
SEC61BP60468 NID1-202ENST00000366595 5412 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
Retrieved 100 of 98,524 protein–RNA pairs in 25.6 ms