Protein–RNA interactions for Protein: P56645

PER3, Period circadian protein homolog 3, humanhuman

Predictions only

Length 1,201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PER3P56645 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
PER3P56645 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
PER3P56645 EIF4G3-214ENST00000634879 5325 ntTSL 5 BASIC17.56■□□□□ 0.4
PER3P56645 PRSS50-202ENST00000315170 1372 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
PER3P56645 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
PER3P56645 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC17.56■□□□□ 0.4
PER3P56645 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
PER3P56645 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC17.56■□□□□ 0.4
PER3P56645 WAC-202ENST00000347934 2839 ntTSL 5 BASIC17.56■□□□□ 0.4
PER3P56645 AC112907.3-201ENST00000577781 2400 ntBASIC17.56■□□□□ 0.4
PER3P56645 MCCC1-214ENST00000610757 2410 ntTSL 5 BASIC17.56■□□□□ 0.4
PER3P56645 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
PER3P56645 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC17.56■□□□□ 0.4
PER3P56645 RASGRP2-205ENST00000377489 583 ntTSL 3 BASIC17.56■□□□□ 0.4
PER3P56645 AC012618.3-202ENST00000440004 472 ntTSL 4 BASIC17.56■□□□□ 0.4
PER3P56645 LINC01293-201ENST00000453951 1266 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
PER3P56645 C1QL1P1-201ENST00000568105 661 ntBASIC17.56■□□□□ 0.4
PER3P56645 BVES-AS1-203ENST00000580511 853 ntTSL 5 BASIC17.56■□□□□ 0.4
PER3P56645 AC131212.4-201ENST00000623606 975 ntBASIC17.56■□□□□ 0.4
PER3P56645 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC17.56■□□□□ 0.4
PER3P56645 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC17.56■□□□□ 0.4
PER3P56645 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
PER3P56645 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC17.56■□□□□ 0.4
PER3P56645 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
PER3P56645 ANKDD1B-204ENST00000601380 2569 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
PER3P56645 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC17.56■□□□□ 0.4
PER3P56645 C19orf25-206ENST00000588849 1472 ntTSL 5 BASIC17.56■□□□□ 0.4
PER3P56645 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC17.56■□□□□ 0.4
PER3P56645 TMEM131-201ENST00000186436 6640 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
PER3P56645 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC17.55■□□□□ 0.4
PER3P56645 FAM228B-210ENST00000615575 1357 ntAPPRIS P3 TSL 5 BASIC17.55■□□□□ 0.4
PER3P56645 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
PER3P56645 NCAN-201ENST00000252575 6387 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
PER3P56645 FRRS1L-201ENST00000561981 8197 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
PER3P56645 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC17.55■□□□□ 0.4
PER3P56645 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC17.55■□□□□ 0.4
PER3P56645 AC116351.2-201ENST00000606540 1585 ntBASIC17.55■□□□□ 0.4
PER3P56645 AGTRAP-201ENST00000314340 1107 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
PER3P56645 FGF8-201ENST00000320185 799 ntAPPRIS P4 TSL 1 (best) BASIC17.55■□□□□ 0.4
PER3P56645 TYMSOS-201ENST00000323813 844 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
PER3P56645 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
PER3P56645 ICAM1-202ENST00000423829 1296 ntTSL 2 BASIC17.55■□□□□ 0.4
PER3P56645 CDKN2AIPNL-202ENST00000458198 1223 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
PER3P56645 WDR45-218ENST00000473974 1077 ntTSL 5 BASIC17.55■□□□□ 0.4
PER3P56645 LY6E-211ENST00000521699 1256 ntAPPRIS P2 TSL 5 BASIC17.55■□□□□ 0.4
PER3P56645 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
PER3P56645 SPINK2-207ENST00000631082 392 ntTSL 5 BASIC17.55■□□□□ 0.4
PER3P56645 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC17.55■□□□□ 0.4
PER3P56645 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC17.55■□□□□ 0.4
PER3P56645 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC17.55■□□□□ 0.4
PER3P56645 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC17.55■□□□□ 0.4
PER3P56645 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC17.55■□□□□ 0.4
PER3P56645 TESMIN-201ENST00000255087 2579 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
PER3P56645 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
PER3P56645 PHF20L1-209ENST00000395386 6237 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
PER3P56645 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
PER3P56645 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
PER3P56645 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
PER3P56645 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
PER3P56645 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
PER3P56645 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
PER3P56645 STK25-204ENST00000405585 1643 ntTSL 2 BASIC17.54■□□□□ 0.4
PER3P56645 ARNT-212ENST00000515192 2892 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
PER3P56645 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
PER3P56645 KMT5A-201ENST00000330479 3069 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
PER3P56645 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
PER3P56645 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC17.54■□□□□ 0.4
PER3P56645 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC17.54■□□□□ 0.4
PER3P56645 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC17.54■□□□□ 0.4
PER3P56645 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
PER3P56645 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
PER3P56645 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
PER3P56645 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
PER3P56645 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
PER3P56645 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
PER3P56645 RNF152P1-201ENST00000397754 604 ntBASIC17.54■□□□□ 0.4
PER3P56645 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
PER3P56645 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC17.54■□□□□ 0.4
PER3P56645 B3GAT3P1-201ENST00000471720 806 ntBASIC17.54■□□□□ 0.4
PER3P56645 TMEM185A-204ENST00000507237 903 ntTSL 2 BASIC17.54■□□□□ 0.4
PER3P56645 KRT18P56-201ENST00000507275 550 ntBASIC17.54■□□□□ 0.4
PER3P56645 LY6E-210ENST00000521182 1079 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
PER3P56645 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC17.54■□□□□ 0.4
PER3P56645 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC17.54■□□□□ 0.4
PER3P56645 PTENP1-AS-201ENST00000627688 873 ntTSL 5 BASIC17.54■□□□□ 0.4
PER3P56645 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
PER3P56645 AC018553.1-201ENST00000616682 1458 ntBASIC17.54■□□□□ 0.4
PER3P56645 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
PER3P56645 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
PER3P56645 PHGDH-210ENST00000641115 1638 ntBASIC17.54■□□□□ 0.4
PER3P56645 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
PER3P56645 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
PER3P56645 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC17.54■□□□□ 0.4
PER3P56645 UBN1-201ENST00000262376 6252 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
PER3P56645 SLC25A3-211ENST00000548847 1369 ntTSL 5 BASIC17.53■□□□□ 0.4
PER3P56645 ZBTB4-201ENST00000311403 5956 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
PER3P56645 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC17.53■□□□□ 0.4
PER3P56645 STX6-201ENST00000258301 4851 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
PER3P56645 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
PER3P56645 ARFIP2-204ENST00000445086 1300 ntTSL 2 BASIC17.53■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 28.6 ms