Protein–RNA interactions for Protein: P55316

FOXG1, Forkhead box protein G1, humanhuman

Predicted RBP Predictions only

Length 489 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXG1P55316 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
FOXG1P55316 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
FOXG1P55316 MRPL3-201ENST00000264995 1706 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
FOXG1P55316 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
FOXG1P55316 CRYZL1-203ENST00000381540 1482 ntTSL 2 BASIC16.67■□□□□ 0.26
FOXG1P55316 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
FOXG1P55316 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
FOXG1P55316 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
FOXG1P55316 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
FOXG1P55316 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC16.66■□□□□ 0.26
FOXG1P55316 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC16.66■□□□□ 0.26
FOXG1P55316 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC16.66■□□□□ 0.26
FOXG1P55316 SLX1A-201ENST00000251303 1091 ntAPPRIS P4 TSL 1 (best) BASIC16.66■□□□□ 0.26
FOXG1P55316 POMZP3-201ENST00000275569 1259 ntTSL 2 BASIC16.66■□□□□ 0.26
FOXG1P55316 SLX1B-201ENST00000330181 1165 ntAPPRIS P4 TSL 1 (best) BASIC16.66■□□□□ 0.26
FOXG1P55316 H2AFB2-201ENST00000354514 348 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
FOXG1P55316 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC16.66■□□□□ 0.26
FOXG1P55316 UQCRQ-201ENST00000378665 586 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
FOXG1P55316 AC005521.1-201ENST00000393351 872 ntBASIC16.66■□□□□ 0.26
FOXG1P55316 RCN1P1-201ENST00000400413 996 ntBASIC16.66■□□□□ 0.26
FOXG1P55316 DLEU2-203ENST00000425586 1267 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
FOXG1P55316 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC16.66■□□□□ 0.26
FOXG1P55316 AP001059.1-201ENST00000442785 523 ntTSL 3 BASIC16.66■□□□□ 0.26
FOXG1P55316 SLC25A3P1-201ENST00000443844 931 ntBASIC16.66■□□□□ 0.26
FOXG1P55316 TFDP2-202ENST00000467072 1853 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
FOXG1P55316 CA15P1-201ENST00000481698 905 ntBASIC16.66■□□□□ 0.26
FOXG1P55316 AC098829.1-201ENST00000502344 630 ntTSL 3 BASIC16.66■□□□□ 0.26
FOXG1P55316 KRT18P21-201ENST00000515767 1272 ntBASIC16.66■□□□□ 0.26
FOXG1P55316 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
FOXG1P55316 PPOX-219ENST00000544598 813 ntTSL 2 BASIC16.66■□□□□ 0.26
FOXG1P55316 AC010203.1-204ENST00000548782 407 ntBASIC16.66■□□□□ 0.26
FOXG1P55316 MLST8-232ENST00000569417 1870 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
FOXG1P55316 MIR4674-201ENST00000582457 87 ntBASIC16.66■□□□□ 0.26
FOXG1P55316 FMR1-AS1_2.1-201ENST00000613724 127 ntBASIC16.66■□□□□ 0.26
FOXG1P55316 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
FOXG1P55316 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
FOXG1P55316 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC16.66■□□□□ 0.26
FOXG1P55316 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC16.66■□□□□ 0.26
FOXG1P55316 GPR42-201ENST00000454971 1804 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
FOXG1P55316 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
FOXG1P55316 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
FOXG1P55316 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
FOXG1P55316 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
FOXG1P55316 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC16.65■□□□□ 0.26
FOXG1P55316 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
FOXG1P55316 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC16.65■□□□□ 0.26
FOXG1P55316 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
FOXG1P55316 HES7-201ENST00000317814 678 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
FOXG1P55316 LRRC23-202ENST00000323702 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
FOXG1P55316 BUB3-202ENST00000368859 667 ntTSL 3 BASIC16.65■□□□□ 0.26
FOXG1P55316 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC16.65■□□□□ 0.26
FOXG1P55316 OOEP-AS1-201ENST00000445350 463 ntTSL 3 BASIC16.65■□□□□ 0.26
FOXG1P55316 CCR12P-201ENST00000446203 998 ntBASIC16.65■□□□□ 0.26
FOXG1P55316 AL929554.1-201ENST00000568665 460 ntAPPRIS P1 TSL 3 BASIC16.65■□□□□ 0.26
FOXG1P55316 P4HB-223ENST00000576390 439 ntTSL 4 BASIC16.65■□□□□ 0.26
FOXG1P55316 DEDD2-209ENST00000598727 1037 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
FOXG1P55316 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC16.65■□□□□ 0.26
FOXG1P55316 AC005363.2-201ENST00000618631 242 ntBASIC16.65■□□□□ 0.26
FOXG1P55316 CLN6-221ENST00000637494 765 ntTSL 5 BASIC16.65■□□□□ 0.26
FOXG1P55316 APBB1-210ENST00000530885 1626 ntTSL 2 BASIC16.65■□□□□ 0.26
FOXG1P55316 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
FOXG1P55316 SIGLEC14-201ENST00000360844 2035 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
FOXG1P55316 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
FOXG1P55316 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC16.65■□□□□ 0.26
FOXG1P55316 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
FOXG1P55316 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC16.65■□□□□ 0.26
FOXG1P55316 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC16.65■□□□□ 0.26
FOXG1P55316 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC16.65■□□□□ 0.26
FOXG1P55316 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
FOXG1P55316 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
FOXG1P55316 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC16.64■□□□□ 0.26
FOXG1P55316 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
FOXG1P55316 GJA4-201ENST00000342280 1622 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
FOXG1P55316 SAYSD1-201ENST00000229903 2020 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
FOXG1P55316 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
FOXG1P55316 PRDX5-201ENST00000265462 893 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
FOXG1P55316 ZNF584-202ENST00000322834 1042 ntTSL 2 BASIC16.64■□□□□ 0.25
FOXG1P55316 KRT17P2-202ENST00000326333 1174 ntTSL 2 BASIC16.64■□□□□ 0.25
FOXG1P55316 MCF2L-207ENST00000397024 490 ntTSL 5 BASIC16.64■□□□□ 0.25
FOXG1P55316 KCTD7-202ENST00000443322 1160 ntAPPRIS ALT1 TSL 1 (best) BASIC16.64■□□□□ 0.25
FOXG1P55316 KRT18P57-201ENST00000443599 1254 ntBASIC16.64■□□□□ 0.25
FOXG1P55316 TSPY17P-201ENST00000450329 467 ntBASIC16.64■□□□□ 0.25
FOXG1P55316 AC128688.1-201ENST00000487626 519 ntBASIC16.64■□□□□ 0.25
FOXG1P55316 RNF165-206ENST00000590330 1049 ntTSL 2 BASIC16.64■□□□□ 0.25
FOXG1P55316 L34079.3-201ENST00000600242 546 ntTSL 4 BASIC16.64■□□□□ 0.25
FOXG1P55316 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC16.64■□□□□ 0.25
FOXG1P55316 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
FOXG1P55316 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC16.64■□□□□ 0.25
FOXG1P55316 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC16.64■□□□□ 0.25
FOXG1P55316 CD151-201ENST00000322008 1548 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
FOXG1P55316 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
FOXG1P55316 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
FOXG1P55316 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
FOXG1P55316 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC16.63■□□□□ 0.25
FOXG1P55316 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
FOXG1P55316 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
FOXG1P55316 GOSR2-226ENST00000639287 2367 ntTSL 5 BASIC16.63■□□□□ 0.25
FOXG1P55316 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
FOXG1P55316 METTL5-201ENST00000260953 1010 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
FOXG1P55316 TERF1P1-201ENST00000311003 1181 ntBASIC16.63■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 52.9 ms