Protein–RNA interactions for Protein: P51157

RAB28, Ras-related protein Rab-28, humanhuman

Predictions only

Length 221 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB28P51157 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
RAB28P51157 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC18.36■□□□□ 0.53
RAB28P51157 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC18.36■□□□□ 0.53
RAB28P51157 AC211429.1-201ENST00000415277 523 ntBASIC18.36■□□□□ 0.53
RAB28P51157 CYB561D2-204ENST00000424512 1212 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
RAB28P51157 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC18.36■□□□□ 0.53
RAB28P51157 CHCHD6-204ENST00000508789 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
RAB28P51157 KRT8P3-201ENST00000519669 1449 ntBASIC18.36■□□□□ 0.53
RAB28P51157 LINC01023-201ENST00000606054 436 ntBASIC18.36■□□□□ 0.53
RAB28P51157 AC012306.2-201ENST00000609350 630 ntBASIC18.36■□□□□ 0.53
RAB28P51157 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
RAB28P51157 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC18.36■□□□□ 0.53
RAB28P51157 AL590627.2-201ENST00000637510 144 ntTSL 5 BASIC18.36■□□□□ 0.53
RAB28P51157 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
RAB28P51157 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
RAB28P51157 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
RAB28P51157 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
RAB28P51157 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC18.35■□□□□ 0.53
RAB28P51157 AL161938.1-201ENST00000569833 2180 ntBASIC18.35■□□□□ 0.53
RAB28P51157 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
RAB28P51157 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC18.35■□□□□ 0.53
RAB28P51157 ABHD14B-202ENST00000361143 1636 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
RAB28P51157 TNFRSF19-202ENST00000382258 1625 ntAPPRIS P4 TSL 1 (best) BASIC18.35■□□□□ 0.53
RAB28P51157 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
RAB28P51157 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC18.35■□□□□ 0.53
RAB28P51157 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
RAB28P51157 AC092338.2-201ENST00000568827 1415 ntBASIC18.35■□□□□ 0.53
RAB28P51157 CUTC-202ENST00000370476 1346 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
RAB28P51157 KRT18P22-201ENST00000402024 1347 ntBASIC18.35■□□□□ 0.53
RAB28P51157 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
RAB28P51157 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC18.35■□□□□ 0.53
RAB28P51157 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
RAB28P51157 HPF1-201ENST00000393381 1230 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
RAB28P51157 SHBG-203ENST00000416273 1042 ntAPPRIS ALT2 TSL 3 BASIC18.35■□□□□ 0.53
RAB28P51157 TSPY1-201ENST00000423647 1171 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
RAB28P51157 DLEU2-203ENST00000425586 1267 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
RAB28P51157 AC021087.1-201ENST00000512642 522 ntTSL 2 BASIC18.35■□□□□ 0.53
RAB28P51157 RAB2A-211ENST00000531289 1058 ntTSL 2 BASIC18.35■□□□□ 0.53
RAB28P51157 AL353719.1-201ENST00000566847 864 ntBASIC18.35■□□□□ 0.53
RAB28P51157 SHBG-215ENST00000575903 1196 ntTSL 3 BASIC18.35■□□□□ 0.53
RAB28P51157 AC006942.1-201ENST00000600669 520 ntTSL 2 BASIC18.35■□□□□ 0.53
RAB28P51157 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC18.35■□□□□ 0.53
RAB28P51157 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
RAB28P51157 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
RAB28P51157 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
RAB28P51157 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC18.35■□□□□ 0.53
RAB28P51157 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
RAB28P51157 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
RAB28P51157 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
RAB28P51157 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
RAB28P51157 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
RAB28P51157 BTBD1-202ENST00000379403 1467 ntTSL 5 BASIC18.34■□□□□ 0.53
RAB28P51157 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
RAB28P51157 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
RAB28P51157 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
RAB28P51157 HSCB-201ENST00000216027 1114 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
RAB28P51157 ING1-202ENST00000338450 1189 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
RAB28P51157 UNC5B-AS1-201ENST00000447119 647 ntTSL 2 BASIC18.34■□□□□ 0.53
RAB28P51157 SLC39A11-207ENST00000579732 1004 ntTSL 2 BASIC18.34■□□□□ 0.53
RAB28P51157 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
RAB28P51157 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC18.34■□□□□ 0.53
RAB28P51157 MRPL3-201ENST00000264995 1706 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
RAB28P51157 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
RAB28P51157 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
RAB28P51157 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
RAB28P51157 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
RAB28P51157 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.53
RAB28P51157 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC18.33■□□□□ 0.53
RAB28P51157 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
RAB28P51157 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
RAB28P51157 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC18.33■□□□□ 0.53
RAB28P51157 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC18.33■□□□□ 0.53
RAB28P51157 FKBP8-206ENST00000596558 1756 ntAPPRIS ALT1 TSL 2 BASIC18.33■□□□□ 0.53
RAB28P51157 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
RAB28P51157 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
RAB28P51157 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC18.33■□□□□ 0.52
RAB28P51157 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC18.33■□□□□ 0.52
RAB28P51157 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC18.33■□□□□ 0.52
RAB28P51157 ZNF534-203ENST00000432303 956 ntTSL 2 BASIC18.33■□□□□ 0.52
RAB28P51157 AC007663.1-201ENST00000438948 1240 ntBASIC18.33■□□□□ 0.52
RAB28P51157 EIF2AK4-209ENST00000560648 687 ntTSL 3 BASIC18.33■□□□□ 0.52
RAB28P51157 RAB11B-AS1-201ENST00000593581 1013 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
RAB28P51157 FMR1-AS1_2.1-201ENST00000613724 127 ntBASIC18.33■□□□□ 0.52
RAB28P51157 AC010653.2-201ENST00000623505 997 ntBASIC18.33■□□□□ 0.52
RAB28P51157 TNFRSF1A-213ENST00000540022 1527 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
RAB28P51157 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC18.33■□□□□ 0.52
RAB28P51157 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC18.33■□□□□ 0.52
RAB28P51157 KATNBL1P6-202ENST00000562413 1466 ntBASIC18.33■□□□□ 0.52
RAB28P51157 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC18.32■□□□□ 0.52
RAB28P51157 DHRS4-201ENST00000313250 1443 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
RAB28P51157 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC18.32■□□□□ 0.52
RAB28P51157 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
RAB28P51157 CDC14B-208ENST00000463569 1734 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
RAB28P51157 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
RAB28P51157 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
RAB28P51157 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
RAB28P51157 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
RAB28P51157 TMEM91-210ENST00000542945 1610 ntTSL 2 BASIC18.32■□□□□ 0.52
RAB28P51157 TBC1D3P2-202ENST00000577902 1649 ntBASIC18.32■□□□□ 0.52
RAB28P51157 BUB3-202ENST00000368859 667 ntTSL 3 BASIC18.32■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 22.1 ms