Protein–RNA interactions for Protein: P50458

LHX2, LIM/homeobox protein Lhx2, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LHX2P50458 DOC2A-209ENST00000564979 1630 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
LHX2P50458 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
LHX2P50458 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
LHX2P50458 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
LHX2P50458 FP475955.4-201ENST00000623131 1990 ntBASIC16.98■□□□□ 0.31
LHX2P50458 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
LHX2P50458 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC16.98■□□□□ 0.31
LHX2P50458 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
LHX2P50458 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
LHX2P50458 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
LHX2P50458 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
LHX2P50458 GPAT2P1-201ENST00000444924 1672 ntBASIC16.97■□□□□ 0.31
LHX2P50458 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
LHX2P50458 PHB2-203ENST00000535923 1515 ntAPPRIS P2 TSL 5 BASIC16.97■□□□□ 0.31
LHX2P50458 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC16.97■□□□□ 0.31
LHX2P50458 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC16.97■□□□□ 0.31
LHX2P50458 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
LHX2P50458 TMEM91-210ENST00000542945 1610 ntTSL 2 BASIC16.97■□□□□ 0.31
LHX2P50458 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC16.97■□□□□ 0.31
LHX2P50458 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
LHX2P50458 PAX3-201ENST00000258387 958 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
LHX2P50458 MRPL52-201ENST00000311892 1042 ntTSL 3 BASIC16.97■□□□□ 0.31
LHX2P50458 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
LHX2P50458 ROMO1-202ENST00000374072 350 ntTSL 5 BASIC16.97■□□□□ 0.31
LHX2P50458 C6orf48-206ENST00000375641 602 ntAPPRIS P1 TSL 2 BASIC16.97■□□□□ 0.31
LHX2P50458 PRICKLE4-202ENST00000394260 1035 ntAPPRIS ALT2 TSL 2 BASIC16.97■□□□□ 0.31
LHX2P50458 PRICKLE4-203ENST00000394263 1155 ntAPPRIS P2 TSL 5 BASIC16.97■□□□□ 0.31
LHX2P50458 C21orf91-202ENST00000400558 1090 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
LHX2P50458 HAGLR-204ENST00000425005 623 ntTSL 3 BASIC16.97■□□□□ 0.31
LHX2P50458 AC117947.1-201ENST00000427448 529 ntBASIC16.97■□□□□ 0.31
LHX2P50458 RPL39L-203ENST00000455270 653 ntAPPRIS P1 TSL 2 BASIC16.97■□□□□ 0.31
LHX2P50458 CDKN2AIPNL-202ENST00000458198 1223 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
LHX2P50458 ABHD14B-208ENST00000525795 980 ntAPPRIS P1 TSL 3 BASIC16.97■□□□□ 0.31
LHX2P50458 CENPX-206ENST00000580435 710 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
LHX2P50458 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC16.97■□□□□ 0.31
LHX2P50458 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
LHX2P50458 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC16.97■□□□□ 0.31
LHX2P50458 TBC1D10C-201ENST00000312390 1497 ntTSL 5 BASIC16.97■□□□□ 0.31
LHX2P50458 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
LHX2P50458 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC16.97■□□□□ 0.31
LHX2P50458 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
LHX2P50458 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC16.97■□□□□ 0.31
LHX2P50458 OR13J1-201ENST00000377981 1339 ntAPPRIS P1 BASIC16.96■□□□□ 0.31
LHX2P50458 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC16.96■□□□□ 0.31
LHX2P50458 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
LHX2P50458 C22orf39-205ENST00000542103 1523 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
LHX2P50458 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
LHX2P50458 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
LHX2P50458 TSGA10IP-203ENST00000532620 1925 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
LHX2P50458 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
LHX2P50458 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC16.96■□□□□ 0.31
LHX2P50458 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
LHX2P50458 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
LHX2P50458 CD7-201ENST00000312648 1281 ntAPPRIS P2 TSL 1 (best) BASIC16.96■□□□□ 0.31
LHX2P50458 NME1-202ENST00000336097 986 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
LHX2P50458 LCN8-201ENST00000371688 867 ntAPPRIS P2 TSL 1 (best) BASIC16.96■□□□□ 0.31
LHX2P50458 NME1-203ENST00000393196 940 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
LHX2P50458 MIEN1-201ENST00000394231 1006 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
LHX2P50458 AL023284.2-201ENST00000405850 579 ntBASIC16.96■□□□□ 0.31
LHX2P50458 AK4P3-201ENST00000418260 669 ntBASIC16.96■□□□□ 0.31
LHX2P50458 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.31
LHX2P50458 COX11P1-201ENST00000489116 835 ntBASIC16.96■□□□□ 0.31
LHX2P50458 NDUFV2-207ENST00000497577 868 ntTSL 2 BASIC16.96■□□□□ 0.31
LHX2P50458 AC104596.1-202ENST00000507486 759 ntTSL 3 BASIC16.96■□□□□ 0.31
LHX2P50458 LINC01385-201ENST00000512310 780 ntTSL 4 BASIC16.96■□□□□ 0.31
LHX2P50458 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC16.96■□□□□ 0.31
LHX2P50458 LINC01024-205ENST00000521563 939 ntTSL 3 BASIC16.96■□□□□ 0.31
LHX2P50458 GCHFR-202ENST00000558467 785 ntTSL 2 BASIC16.96■□□□□ 0.31
LHX2P50458 AC139887.4-201ENST00000607877 719 ntBASIC16.96■□□□□ 0.31
LHX2P50458 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC16.96■□□□□ 0.31
LHX2P50458 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC16.96■□□□□ 0.31
LHX2P50458 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
LHX2P50458 ABHD14B-202ENST00000361143 1636 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
LHX2P50458 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.3
LHX2P50458 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
LHX2P50458 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC16.95■□□□□ 0.3
LHX2P50458 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
LHX2P50458 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
LHX2P50458 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
LHX2P50458 KATNBL1P6-202ENST00000562413 1466 ntBASIC16.95■□□□□ 0.3
LHX2P50458 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
LHX2P50458 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
LHX2P50458 OXT-201ENST00000217386 513 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
LHX2P50458 MPG-201ENST00000219431 1193 ntAPPRIS P4 TSL 3 BASIC16.95■□□□□ 0.3
LHX2P50458 OCIAD2-201ENST00000273860 636 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
LHX2P50458 LCE3C-201ENST00000333881 425 ntAPPRIS P1 BASIC16.95■□□□□ 0.3
LHX2P50458 SUV39H2-204ENST00000378325 1292 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
LHX2P50458 AC007563.2-201ENST00000447289 552 ntTSL 5 BASIC16.95■□□□□ 0.3
LHX2P50458 AC009185.1-201ENST00000517634 911 ntTSL 3 BASIC16.95■□□□□ 0.3
LHX2P50458 NME3-204ENST00000563498 920 ntTSL 2 BASIC16.95■□□□□ 0.3
LHX2P50458 JOSD2-204ENST00000598418 996 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
LHX2P50458 BDKRB1-204ENST00000611804 1085 ntAPPRIS P1 BASIC16.95■□□□□ 0.3
LHX2P50458 OCIAD2-210ENST00000620187 697 ntTSL 3 BASIC16.95■□□□□ 0.3
LHX2P50458 CR769767.2-201ENST00000622735 460 ntBASIC16.95■□□□□ 0.3
LHX2P50458 AL590326.2-201ENST00000625139 305 ntBASIC16.95■□□□□ 0.3
LHX2P50458 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
LHX2P50458 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
LHX2P50458 RPS6KB1-204ENST00000443572 1913 ntTSL 2 BASIC16.95■□□□□ 0.3
LHX2P50458 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
LHX2P50458 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 22.2 ms