Protein–RNA interactions for Protein: P35125

USP6, Ubiquitin carboxyl-terminal hydrolase 6, humanhuman

Predictions only

Length 1,406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP6P35125 NAPSB-203ENST00000531692 561 ntTSL 2 BASIC25.7■■□□□ 1.7
USP6P35125 KRT8P26-201ENST00000534154 1276 ntBASIC25.7■■□□□ 1.7
USP6P35125 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC25.7■■□□□ 1.7
USP6P35125 RCC2P3-201ENST00000418112 1537 ntBASIC25.7■■□□□ 1.7
USP6P35125 EPB41L4B-202ENST00000374566 5800 ntAPPRIS P4 TSL 1 (best) BASIC25.69■■□□□ 1.7
USP6P35125 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC25.69■■□□□ 1.7
USP6P35125 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC25.69■■□□□ 1.7
USP6P35125 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC25.69■■□□□ 1.7
USP6P35125 SHBG-201ENST00000340624 1311 ntTSL 1 (best) BASIC25.69■■□□□ 1.7
USP6P35125 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC25.69■■□□□ 1.7
USP6P35125 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC25.69■■□□□ 1.7
USP6P35125 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC25.69■■□□□ 1.7
USP6P35125 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC25.69■■□□□ 1.7
USP6P35125 MRAS-204ENST00000464896 1534 ntTSL 2 BASIC25.69■■□□□ 1.7
USP6P35125 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC25.69■■□□□ 1.7
USP6P35125 DBNDD2-202ENST00000360981 1078 ntAPPRIS P1 TSL 1 (best) BASIC25.69■■□□□ 1.7
USP6P35125 LENG8-AS1-201ENST00000416022 582 ntTSL 3 BASIC25.69■■□□□ 1.7
USP6P35125 DYDC2-206ENST00000444807 1173 ntAPPRIS P3 TSL 3 BASIC25.69■■□□□ 1.7
USP6P35125 ZNF346-205ENST00000506693 1276 ntTSL 2 BASIC25.69■■□□□ 1.7
USP6P35125 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC25.69■■□□□ 1.7
USP6P35125 AL161669.1-201ENST00000559843 386 ntTSL 3 BASIC25.69■■□□□ 1.7
USP6P35125 HOXB8-203ENST00000576562 743 ntAPPRIS ALT1 TSL 2 BASIC25.69■■□□□ 1.7
USP6P35125 AP002414.4-201ENST00000589764 1148 ntBASIC25.69■■□□□ 1.7
USP6P35125 AL732314.6-201ENST00000627721 484 ntTSL 4 BASIC25.69■■□□□ 1.7
USP6P35125 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC25.69■■□□□ 1.7
USP6P35125 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC25.69■■□□□ 1.7
USP6P35125 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC25.69■■□□□ 1.7
USP6P35125 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC25.68■■□□□ 1.7
USP6P35125 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC25.68■■□□□ 1.7
USP6P35125 TPD52-211ENST00000519303 1594 ntTSL 1 (best) BASIC25.68■■□□□ 1.7
USP6P35125 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC25.68■■□□□ 1.7
USP6P35125 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC25.68■■□□□ 1.7
USP6P35125 PPIH-202ENST00000372549 327 ntTSL 3 BASIC25.68■■□□□ 1.7
USP6P35125 ING5-202ENST00000406941 946 ntAPPRIS ALT1 TSL 1 (best) BASIC25.68■■□□□ 1.7
USP6P35125 MCFD2-203ENST00000409147 671 ntTSL 2 BASIC25.68■■□□□ 1.7
USP6P35125 AC246785.2-201ENST00000432512 513 ntBASIC25.68■■□□□ 1.7
USP6P35125 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC25.68■■□□□ 1.7
USP6P35125 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC25.68■■□□□ 1.7
USP6P35125 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC25.68■■□□□ 1.7
USP6P35125 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC25.68■■□□□ 1.7
USP6P35125 AL512353.2-201ENST00000448759 1962 ntBASIC25.68■■□□□ 1.7
USP6P35125 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC25.67■■□□□ 1.7
USP6P35125 HOXB1-202ENST00000577092 1414 ntBASIC25.67■■□□□ 1.7
USP6P35125 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC25.67■■□□□ 1.7
USP6P35125 NDUFS7-201ENST00000233627 1039 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
USP6P35125 PGLS-201ENST00000252603 1028 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
USP6P35125 UFSP1-201ENST00000388761 996 ntAPPRIS P1 BASIC25.67■■□□□ 1.7
USP6P35125 CHCHD2P8-201ENST00000429873 447 ntBASIC25.67■■□□□ 1.7
USP6P35125 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC25.67■■□□□ 1.7
USP6P35125 RNF126P1-202ENST00000569893 925 ntBASIC25.67■■□□□ 1.7
USP6P35125 ANAPC11-217ENST00000579978 575 ntAPPRIS P1 TSL 2 BASIC25.67■■□□□ 1.7
USP6P35125 AP000547.2-201ENST00000609641 661 ntTSL 5 BASIC25.67■■□□□ 1.7
USP6P35125 CLN3-259ENST00000637551 1083 ntTSL 5 BASIC25.67■■□□□ 1.7
USP6P35125 ZNF655-203ENST00000357864 1370 ntTSL 2 BASIC25.67■■□□□ 1.7
USP6P35125 FAM182B-201ENST00000376403 1681 ntAPPRIS P5 TSL 1 (best) BASIC25.67■■□□□ 1.7
USP6P35125 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC25.67■■□□□ 1.7
USP6P35125 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC25.67■■□□□ 1.7
USP6P35125 OLIG2-202ENST00000382357 2578 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
USP6P35125 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
USP6P35125 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC25.67■■□□□ 1.7
USP6P35125 SRSF1-208ENST00000584773 1317 ntTSL 5 BASIC25.67■■□□□ 1.7
USP6P35125 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC25.66■■□□□ 1.7
USP6P35125 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC25.66■■□□□ 1.7
USP6P35125 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC25.66■■□□□ 1.7
USP6P35125 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
USP6P35125 ELANE-201ENST00000263621 920 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
USP6P35125 TMEM234-202ENST00000344461 721 ntTSL 1 (best) BASIC25.66■■□□□ 1.7
USP6P35125 MPIG6B-205ENST00000375810 910 ntAPPRIS ALT2 TSL 1 (best) BASIC25.66■■□□□ 1.7
USP6P35125 GGT1-208ENST00000404920 657 ntTSL 1 (best) BASIC25.66■■□□□ 1.7
USP6P35125 GGTLC2-203ENST00000480559 657 ntTSL 1 (best) BASIC25.66■■□□□ 1.7
USP6P35125 ANKRD36-207ENST00000639293 1168 ntAPPRIS ALT2 TSL 5 BASIC25.66■■□□□ 1.7
USP6P35125 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC25.66■■□□□ 1.7
USP6P35125 AC125437.2-201ENST00000625180 2167 ntBASIC25.66■■□□□ 1.7
USP6P35125 RIOX1-201ENST00000304061 2429 ntAPPRIS P1 BASIC25.66■■□□□ 1.7
USP6P35125 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
USP6P35125 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC25.66■■□□□ 1.7
USP6P35125 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC25.66■■□□□ 1.7
USP6P35125 AC008556.1-201ENST00000610908 2040 ntBASIC25.66■■□□□ 1.7
USP6P35125 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC25.65■■□□□ 1.7
USP6P35125 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC25.65■■□□□ 1.7
USP6P35125 ENSA-205ENST00000361532 792 ntTSL 2 BASIC25.65■■□□□ 1.7
USP6P35125 TSPY8-203ENST00000383005 435 ntTSL 5 BASIC25.65■■□□□ 1.7
USP6P35125 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC25.65■■□□□ 1.7
USP6P35125 AP000721.2-201ENST00000537170 650 ntTSL 4 BASIC25.65■■□□□ 1.7
USP6P35125 TPSP2-201ENST00000561760 610 ntBASIC25.65■■□□□ 1.7
USP6P35125 RNPS1-224ENST00000569598 918 ntTSL 5 BASIC25.65■■□□□ 1.7
USP6P35125 RN7SL510P-201ENST00000581311 263 ntBASIC25.65■■□□□ 1.7
USP6P35125 SYNGR2-202ENST00000585591 949 ntAPPRIS P1 TSL 5 BASIC25.65■■□□□ 1.7
USP6P35125 TPSB2-201ENST00000606293 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC25.65■■□□□ 1.7
USP6P35125 TP53I11-223ENST00000627720 195 ntTSL 5 BASIC25.65■■□□□ 1.7
USP6P35125 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
USP6P35125 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
USP6P35125 APBB1IP-201ENST00000356785 1513 ntTSL 1 (best) BASIC25.65■■□□□ 1.7
USP6P35125 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
USP6P35125 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC25.65■■□□□ 1.7
USP6P35125 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC25.65■■□□□ 1.7
USP6P35125 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
USP6P35125 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC25.65■■□□□ 1.7
USP6P35125 PTPRN2-204ENST00000404321 1374 ntTSL 5 BASIC25.64■■□□□ 1.7
USP6P35125 SIGIRR-220ENST00000531205 1649 ntTSL 2 BASIC25.64■■□□□ 1.7
Retrieved 100 of 98,524 protein–RNA pairs in 27 ms