Protein–RNA interactions for Protein: P30511

HLA-F, HLA class I histocompatibility antigen, alpha chain F, humanhuman

Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-FP30511 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
HLA-FP30511 ADM-207ENST00000530439 1839 ntTSL 2 BASIC19.32■□□□□ 0.68
HLA-FP30511 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC19.32■□□□□ 0.68
HLA-FP30511 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
HLA-FP30511 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
HLA-FP30511 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
HLA-FP30511 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
HLA-FP30511 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
HLA-FP30511 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
HLA-FP30511 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
HLA-FP30511 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
HLA-FP30511 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
HLA-FP30511 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC19.31■□□□□ 0.68
HLA-FP30511 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC19.31■□□□□ 0.68
HLA-FP30511 COPE-203ENST00000351079 907 ntTSL 2 BASIC19.31■□□□□ 0.68
HLA-FP30511 LCE3D-201ENST00000368787 613 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
HLA-FP30511 APBB3-216ENST00000511201 1014 ntTSL 5 BASIC19.31■□□□□ 0.68
HLA-FP30511 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
HLA-FP30511 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC19.31■□□□□ 0.68
HLA-FP30511 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
HLA-FP30511 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
HLA-FP30511 RPS6KB1-204ENST00000443572 1913 ntTSL 2 BASIC19.31■□□□□ 0.68
HLA-FP30511 WIPI1-202ENST00000546360 1575 ntTSL 2 BASIC19.31■□□□□ 0.68
HLA-FP30511 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC19.31■□□□□ 0.68
HLA-FP30511 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
HLA-FP30511 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
HLA-FP30511 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
HLA-FP30511 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
HLA-FP30511 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC19.3■□□□□ 0.68
HLA-FP30511 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
HLA-FP30511 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
HLA-FP30511 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
HLA-FP30511 MED25-212ENST00000618715 1467 ntTSL 5 BASIC19.3■□□□□ 0.68
HLA-FP30511 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
HLA-FP30511 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC19.3■□□□□ 0.68
HLA-FP30511 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC19.3■□□□□ 0.68
HLA-FP30511 LCE4A-202ENST00000368777 672 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
HLA-FP30511 NFU1-202ENST00000394305 1058 ntTSL 5 BASIC19.3■□□□□ 0.68
HLA-FP30511 AP000523.1-201ENST00000398242 1049 ntBASIC19.3■□□□□ 0.68
HLA-FP30511 MIR1302-2HG-202ENST00000473358 712 ntTSL 5 BASIC19.3■□□□□ 0.68
HLA-FP30511 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
HLA-FP30511 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC19.3■□□□□ 0.68
HLA-FP30511 CENPS-CORT-205ENST00000602787 571 ntAPPRIS P1 TSL 3 BASIC19.3■□□□□ 0.68
HLA-FP30511 C10orf142-201ENST00000619243 1110 ntAPPRIS P2 TSL 2 BASIC19.3■□□□□ 0.68
HLA-FP30511 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
HLA-FP30511 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
HLA-FP30511 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
HLA-FP30511 AC093484.2-201ENST00000580996 2166 ntBASIC19.3■□□□□ 0.68
HLA-FP30511 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
HLA-FP30511 IRX1P1-201ENST00000438849 1838 ntBASIC19.3■□□□□ 0.68
HLA-FP30511 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
HLA-FP30511 AC007952.6-201ENST00000573168 2673 ntBASIC19.29■□□□□ 0.68
HLA-FP30511 AC003957.1-201ENST00000625108 2673 ntBASIC19.29■□□□□ 0.68
HLA-FP30511 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC19.29■□□□□ 0.68
HLA-FP30511 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
HLA-FP30511 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
HLA-FP30511 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
HLA-FP30511 FEM1AP3-201ENST00000403722 1741 ntBASIC19.29■□□□□ 0.68
HLA-FP30511 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC19.29■□□□□ 0.68
HLA-FP30511 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
HLA-FP30511 KHDC1-201ENST00000257765 1134 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
HLA-FP30511 KRTAP5-10-201ENST00000398531 1176 ntAPPRIS P1 BASIC19.29■□□□□ 0.68
HLA-FP30511 AL031133.1-201ENST00000406807 723 ntBASIC19.29■□□□□ 0.68
HLA-FP30511 AC114763.1-202ENST00000414911 867 ntTSL 3 BASIC19.29■□□□□ 0.68
HLA-FP30511 LINC01063-201ENST00000441644 348 ntTSL 3 BASIC19.29■□□□□ 0.68
HLA-FP30511 HOMER2P1-201ENST00000455653 964 ntBASIC19.29■□□□□ 0.68
HLA-FP30511 AL359075.1-203ENST00000462729 1002 ntBASIC19.29■□□□□ 0.68
HLA-FP30511 EHMT1-211ENST00000482340 691 ntTSL 5 BASIC19.29■□□□□ 0.68
HLA-FP30511 AZIN1-AS1-214ENST00000522850 473 ntTSL 3 BASIC19.29■□□□□ 0.68
HLA-FP30511 C12orf76-204ENST00000547573 607 ntTSL 3 BASIC19.29■□□□□ 0.68
HLA-FP30511 GOLGA2P7-203ENST00000557881 896 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
HLA-FP30511 AC004448.5-201ENST00000579897 567 ntTSL 5 BASIC19.29■□□□□ 0.68
HLA-FP30511 UBA52-210ENST00000598780 668 ntAPPRIS P1 TSL 3 BASIC19.29■□□□□ 0.68
HLA-FP30511 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
HLA-FP30511 KHDC1-207ENST00000610435 1101 ntAPPRIS P3 TSL 5 BASIC19.29■□□□□ 0.68
HLA-FP30511 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC19.29■□□□□ 0.68
HLA-FP30511 GOLGA2P10-205ENST00000618267 983 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
HLA-FP30511 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
HLA-FP30511 LINC01586-201ENST00000506090 1840 ntTSL 2 BASIC19.29■□□□□ 0.68
HLA-FP30511 AC141586.3-201ENST00000562166 1838 ntBASIC19.29■□□□□ 0.68
HLA-FP30511 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
HLA-FP30511 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
HLA-FP30511 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
HLA-FP30511 TMEM91-210ENST00000542945 1610 ntTSL 2 BASIC19.29■□□□□ 0.68
HLA-FP30511 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
HLA-FP30511 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC19.29■□□□□ 0.68
HLA-FP30511 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
HLA-FP30511 KLHL14-201ENST00000358095 1884 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
HLA-FP30511 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
HLA-FP30511 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
HLA-FP30511 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
HLA-FP30511 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC19.28■□□□□ 0.68
HLA-FP30511 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
HLA-FP30511 COMTD1-201ENST00000372538 976 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
HLA-FP30511 CCNG1-211ENST00000512163 919 ntTSL 2 BASIC19.28■□□□□ 0.68
HLA-FP30511 RBPMS-AS1-202ENST00000519753 1031 ntTSL 5 BASIC19.28■□□□□ 0.68
HLA-FP30511 GRP-204ENST00000529320 824 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
HLA-FP30511 FOSL1-203ENST00000531493 1200 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
HLA-FP30511 MCRIP1-206ENST00000573478 1123 ntTSL 2 BASIC19.28■□□□□ 0.68
HLA-FP30511 EEF2KMT-206ENST00000587133 873 ntAPPRIS ALT2 TSL 3 BASIC19.28■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 45.3 ms